RNA–Protein interactions for RNA: YFR022W

ROG3, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeastyeast

Gene ROG3, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROG3YFR022W TY4B-PA0A0B7P3V8 1104 aa6.38□□□□□ -1.39
ROG3YFR022W SWH1P35845 1188 aa6.38□□□□□ -1.39
ROG3YFR022W BDP1P46678 594 aa6.38□□□□□ -1.39
ROG3YFR022W PUS1Q12211 544 aaKnown RBP6.38□□□□□ -1.39
ROG3YFR022W SSM4P40318 1319 aa6.37□□□□□ -1.39
ROG3YFR022W UBP10P53874 792 aaPredicted RBP6.37□□□□□ -1.39
ROG3YFR022W YOR389WQ08912 624 aa6.37□□□□□ -1.39
ROG3YFR022W RAD3P06839 778 aa6.37□□□□□ -1.39
ROG3YFR022W AIM20P40451 204 aa6.37□□□□□ -1.39
ROG3YFR022W PXR1P53335 271 aaPredicted RBP6.37□□□□□ -1.39
ROG3YFR022W RAD9P14737 1309 aa6.36□□□□□ -1.39
ROG3YFR022W RIM101P33400 625 aa6.36□□□□□ -1.39
ROG3YFR022W NDL1Q06568 189 aa6.36□□□□□ -1.39
ROG3YFR022W GLE1Q12315 538 aa6.36□□□□□ -1.39
ROG3YFR022W SPB4P25808 606 aaPredicted RBP6.35□□□□□ -1.39
ROG3YFR022W YKR023WP36119 530 aaKnown RBP6.35□□□□□ -1.39
ROG3YFR022W BRN1P38170 754 aa6.35□□□□□ -1.39
ROG3YFR022W HOS3Q02959 697 aaKnown RBP6.35□□□□□ -1.39
ROG3YFR022W GGA1Q06336 557 aa6.35□□□□□ -1.39
ROG3YFR022W PSO2P30620 661 aa6.35□□□□□ -1.39
ROG3YFR022W PUP2P32379 260 aa6.35□□□□□ -1.39
ROG3YFR022W YNL050CP53952 270 aa6.35□□□□□ -1.39
ROG3YFR022W IMH1Q06704 911 aaKnown RBP6.35□□□□□ -1.39
ROG3YFR022W NFI1Q12216 726 aa6.35□□□□□ -1.39
ROG3YFR022W SEC39Q12745 709 aa6.35□□□□□ -1.39
ROG3YFR022W NDC80P40460 691 aa6.34□□□□□ -1.39
ROG3YFR022W MGA2P40578 1113 aa6.34□□□□□ -1.39
ROG3YFR022W COG8Q04632 607 aa6.34□□□□□ -1.39
ROG3YFR022W LSP1Q12230 341 aaKnown RBP6.34□□□□□ -1.39
ROG3YFR022W SPT5P27692 1063 aaKnown RBP6.34□□□□□ -1.39
ROG3YFR022W ISW1P38144 1129 aa6.34□□□□□ -1.39
ROG3YFR022W DMA1P38823 416 aa6.34□□□□□ -1.39
ROG3YFR022W RCF1Q03713 159 aa6.34□□□□□ -1.39
ROG3YFR022W YMR196WQ04336 1088 aa6.33□□□□□ -1.4
ROG3YFR022W TRM3Q07527 1436 aa6.33□□□□□ -1.4
ROG3YFR022W CFT2Q12102 859 aaPredicted RBP6.33□□□□□ -1.4
ROG3YFR022W YOL087CQ99247 1116 aa6.33□□□□□ -1.4
ROG3YFR022W KIP3P53086 805 aaKnown RBP6.33□□□□□ -1.4
ROG3YFR022W UTP13Q05946 817 aaKnown RBP6.33□□□□□ -1.4
ROG3YFR022W MYO2P19524 1574 aaKnown RBP6.32□□□□□ -1.4
ROG3YFR022W TAF2P23255 1407 aa6.32□□□□□ -1.4
ROG3YFR022W BRL1P38770 471 aa6.32□□□□□ -1.4
ROG3YFR022W PSE1P32337 1089 aaKnown RBP6.31□□□□□ -1.4
ROG3YFR022W ASF1P32447 279 aa6.31□□□□□ -1.4
ROG3YFR022W ARR1Q06596 294 aa6.31□□□□□ -1.4
ROG3YFR022W NUP170P38181 1502 aa6.31□□□□□ -1.4
ROG3YFR022W VPS27P40343 622 aaKnown RBP6.31□□□□□ -1.4
ROG3YFR022W YMR1P47147 688 aaKnown RBP RIP-Chip data6.31□□□□□ -1.4not detected
ROG3YFR022W ORM2Q06144 216 aa6.31□□□□□ -1.4
ROG3YFR022W PHO87P25360 923 aa6.3□□□□□ -1.4
ROG3YFR022W VPS5Q92331 675 aa6.3□□□□□ -1.4
ROG3YFR022W SPT6P23615 1451 aaKnown RBP6.3□□□□□ -1.4
ROG3YFR022W TAF13P11747 167 aa6.3□□□□□ -1.4
ROG3YFR022W PIM1P36775 1133 aa6.3□□□□□ -1.4
ROG3YFR022W RIO2P40160 425 aaKnown RBP6.3□□□□□ -1.4
ROG3YFR022W JJJ1P53863 590 aa6.3□□□□□ -1.4
ROG3YFR022W MRS2Q01926 470 aa6.3□□□□□ -1.4
ROG3YFR022W LCD1Q04377 747 aa6.3□□□□□ -1.4
ROG3YFR022W MLP2P40457 1679 aa6.29□□□□□ -1.4
ROG3YFR022W RPG1P38249 964 aaKnown RBP6.29□□□□□ -1.4
ROG3YFR022W NPR3P38742 1146 aa6.29□□□□□ -1.4
ROG3YFR022W IAH1P41734 238 aa6.29□□□□□ -1.4
ROG3YFR022W YGL140CP53120 1219 aa6.29□□□□□ -1.4
ROG3YFR022W SFI1Q12369 946 aa6.29□□□□□ -1.4
ROG3YFR022W CLN1P20437 546 aa6.29□□□□□ -1.4
ROG3YFR022W DSF2P38213 736 aa6.29□□□□□ -1.4
ROG3YFR022W RTT107P38850 1070 aa6.29□□□□□ -1.4
ROG3YFR022W TEA1P47988 759 aa6.29□□□□□ -1.4
ROG3YFR022W PEX19Q07418 342 aa6.29□□□□□ -1.4
ROG3YFR022W MHP1P43638 1398 aa6.28□□□□□ -1.4
ROG3YFR022W TFG1P41895 735 aaPredicted RBP6.28□□□□□ -1.4
ROG3YFR022W MTR4P47047 1073 aaKnown RBP6.28□□□□□ -1.4
ROG3YFR022W NOP7P53261 605 aaKnown RBP6.28□□□□□ -1.4
ROG3YFR022W YMR102CQ03177 834 aa6.28□□□□□ -1.4
ROG3YFR022W RAD50P12753 1312 aa6.28□□□□□ -1.4
ROG3YFR022W SEC20P28791 383 aa6.27□□□□□ -1.4
ROG3YFR022W BRF1P29056 596 aa6.27□□□□□ -1.4
ROG3YFR022W TY1B-DR4Q07793 1604 aa6.27□□□□□ -1.41
ROG3YFR022W PAN1P32521 1480 aa6.27□□□□□ -1.41
ROG3YFR022W GCD6P32501 712 aaKnown RBP6.27□□□□□ -1.41
ROG3YFR022W RRB1Q04225 511 aaKnown RBP6.27□□□□□ -1.41
ROG3YFR022W THR4P16120 514 aaKnown RBP6.26□□□□□ -1.41
ROG3YFR022W EFB1P32471 206 aaKnown RBP6.26□□□□□ -1.41
ROG3YFR022W EXO84P38261 753 aa6.26□□□□□ -1.41
ROG3YFR022W TOM71P38825 639 aaKnown RBP6.26□□□□□ -1.41
ROG3YFR022W SLP1Q12232 587 aa6.26□□□□□ -1.41
ROG3YFR022W SWI6P09959 803 aa6.26□□□□□ -1.41
ROG3YFR022W KEX2P13134 814 aa6.26□□□□□ -1.41
ROG3YFR022W DAL5P15365 543 aa6.26□□□□□ -1.41
ROG3YFR022W CDC45Q08032 650 aa6.26□□□□□ -1.41
ROG3YFR022W RPL5P26321 297 aaKnown RBP6.25□□□□□ -1.41
ROG3YFR022W NUF2P33895 451 aa6.25□□□□□ -1.41
ROG3YFR022W TPS3P38426 1054 aaKnown RBP6.25□□□□□ -1.41
ROG3YFR022W LAM1P38851 1228 aa6.25□□□□□ -1.41
ROG3YFR022W SML1Q04964 104 aa6.25□□□□□ -1.41
ROG3YFR022W SIN3P22579 1536 aa6.25□□□□□ -1.41
ROG3YFR022W PDI1P17967 522 aaKnown RBP6.25□□□□□ -1.41
ROG3YFR022W DPH5P32469 300 aaPredicted RBP6.25□□□□□ -1.41
ROG3YFR022W TPO2P53283 614 aa6.25□□□□□ -1.41
ROG3YFR022W SYH1Q02875 849 aaKnown RBP6.25□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms