RNA–Protein interactions for RNA: YFL008W

SMC1, Transcript of Subunit of the multiprotein cohesin complex, yeastyeast

Gene SMC1, Length 3,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC1YFL008W RSC30P38781 883 aa2.64□□□□□ -1.99
SMC1YFL008W DPL1Q05567 589 aa2.64□□□□□ -1.99
SMC1YFL008W MAK21Q12176 1025 aaKnown RBP2.64□□□□□ -1.99
SMC1YFL008W PSE1P32337 1089 aaKnown RBP2.63□□□□□ -1.99
SMC1YFL008W ERF2Q06551 359 aa2.63□□□□□ -1.99
SMC1YFL008W BUD20Q08004 166 aaPredicted RBP2.63□□□□□ -1.99
SMC1YFL008W YPL062WQ02781 134 aa2.62□□□□□ -1.99
SMC1YFL008W YEL077CQ3E7X8 1277 aa2.62□□□□□ -1.99
SMC1YFL008W MOD5P07884 428 aa2.62□□□□□ -1.99
SMC1YFL008W NIS1P53939 407 aa2.62□□□□□ -1.99
SMC1YFL008W IES2P40154 320 aa2.61□□□□□ -1.99
SMC1YFL008W ISU2Q12056 156 aa2.6□□□□□ -1.99
SMC1YFL008W RAD54P32863 898 aa2.6□□□□□ -1.99
SMC1YFL008W ISM1P48526 1002 aa2.6□□□□□ -1.99
SMC1YFL008W GCR2Q01722 534 aa2.6□□□□□ -1.99
SMC1YFL008W YNR021WP53723 404 aaKnown RBP2.59□□□□□ -1.99
SMC1YFL008W AIM7Q12156 149 aa2.59□□□□□ -1.99
SMC1YFL008W MAM3Q12296 706 aa2.59□□□□□ -2
SMC1YFL008W SSK2P53599 1579 aa2.59□□□□□ -2
SMC1YFL008W CSC1Q06538 782 aa2.58□□□□□ -2
SMC1YFL008W BRE2P43132 505 aa2.57□□□□□ -2
SMC1YFL008W TFB4Q12004 338 aa2.57□□□□□ -2
SMC1YFL008W ERG12P07277 443 aa2.56□□□□□ -2
SMC1YFL008W GLC3P32775 704 aa2.56□□□□□ -2
SMC1YFL008W AIR1P40507 360 aaKnown RBP2.56□□□□□ -2
SMC1YFL008W MRF1P30775 413 aaPredicted RBP2.56□□□□□ -2
SMC1YFL008W GUA1P38625 525 aaKnown RBP2.56□□□□□ -2
SMC1YFL008W FPK1P53739 893 aa2.56□□□□□ -2
SMC1YFL008W YPR084WQ06821 456 aa2.56□□□□□ -2
SMC1YFL008W SWR1Q05471 1514 aa2.56□□□□□ -2
SMC1YFL008W PEP1P32319 1579 aa2.55□□□□□ -2
SMC1YFL008W HST2P53686 357 aa2.55□□□□□ -2
SMC1YFL008W SAS4Q04003 481 aa2.55□□□□□ -2
SMC1YFL008W YPR109WQ06104 294 aa2.55□□□□□ -2
SMC1YFL008W TUM1Q08686 304 aaKnown RBP2.55□□□□□ -2
SMC1YFL008W SIN3P22579 1536 aa2.55□□□□□ -2
SMC1YFL008W TY1B-BRQ12193 1756 aa2.55□□□□□ -2
SMC1YFL008W TY1B-GR3Q12316 1755 aa2.55□□□□□ -2
SMC1YFL008W TY1B-ORQ92393 1755 aa2.55□□□□□ -2
SMC1YFL008W SCJ1P25303 377 aa2.55□□□□□ -2
SMC1YFL008W INO80P53115 1489 aa2.54□□□□□ -2
SMC1YFL008W TPD3P31383 635 aa2.54□□□□□ -2
SMC1YFL008W PAC1P39946 494 aaKnown RBP2.54□□□□□ -2
SMC1YFL008W NUD1P32336 851 aa2.54□□□□□ -2
SMC1YFL008W CLA4P48562 842 aa2.54□□□□□ -2
SMC1YFL008W FRK1Q03002 865 aaPredicted RBP2.54□□□□□ -2
SMC1YFL008W YRR1Q12172 810 aa2.54□□□□□ -2
SMC1YFL008W APL6P46682 809 aa2.54□□□□□ -2
SMC1YFL008W PEX21P50091 288 aa2.54□□□□□ -2
SMC1YFL008W GLN1P32288 370 aaKnown RBP2.53□□□□□ -2
SMC1YFL008W LEO1P38439 464 aa2.53□□□□□ -2.01
SMC1YFL008W CST6P40535 587 aa2.53□□□□□ -2.01
SMC1YFL008W KEX2P13134 814 aa2.52□□□□□ -2.01
SMC1YFL008W YJU3P28321 313 aa2.52□□□□□ -2.01
SMC1YFL008W RTF1P53064 558 aa2.52□□□□□ -2.01
SMC1YFL008W TUB4P53378 473 aa2.52□□□□□ -2.01
SMC1YFL008W TY1B-HO13535 1793 aa2.52□□□□□ -2.01
SMC1YFL008W TY1B-DR5P0C2I2 1755 aa2.52□□□□□ -2.01
SMC1YFL008W TY1B-DR6P0C2I3 1755 aa2.52□□□□□ -2.01
SMC1YFL008W TY1B-LR2P0C2I5 1755 aa2.52□□□□□ -2.01
SMC1YFL008W TY1B-LR3P0C2I6 1755 aaKnown RBP2.52□□□□□ -2.01
SMC1YFL008W TY1B-PR1P0C2I9 1755 aaKnown RBP2.52□□□□□ -2.01
SMC1YFL008W TY1B-PR2P0C2J0 1756 aa2.52□□□□□ -2.01
SMC1YFL008W TY1B-PR3P0C2J1 1755 aaKnown RBP2.52□□□□□ -2.01
SMC1YFL008W TY1B-JR1P47098 1755 aa2.52□□□□□ -2.01
SMC1YFL008W TY1B-ML2Q03434 1755 aaKnown RBP2.52□□□□□ -2.01
SMC1YFL008W TY1B-ER1Q03612 1755 aa2.52□□□□□ -2.01
SMC1YFL008W TY1B-ML1Q04711 1755 aaKnown RBP2.52□□□□□ -2.01
SMC1YFL008W TY1B-GR2Q12269 1755 aa2.52□□□□□ -2.01
SMC1YFL008W TY1B-OLQ12273 1755 aa2.52□□□□□ -2.01
SMC1YFL008W TY1B-PLQ12414 1755 aaKnown RBP2.52□□□□□ -2.01
SMC1YFL008W RPP1BP10622 106 aaKnown RBP2.52□□□□□ -2.01
SMC1YFL008W KIN1P13185 1064 aa2.52□□□□□ -2.01
SMC1YFL008W TYW1Q08960 810 aaKnown RBP2.52□□□□□ -2.01
SMC1YFL008W TY2B-LR1P0C2J3 1770 aa2.51□□□□□ -2.01
SMC1YFL008W TY2B-FP0CX63 1770 aa2.51□□□□□ -2.01
SMC1YFL008W TY2B-GR2P0CX64 1770 aa2.51□□□□□ -2.01
SMC1YFL008W TY2B-CP25384 1770 aa2.51□□□□□ -2.01
SMC1YFL008W TY2B-DR2Q03494 1770 aa2.51□□□□□ -2.01
SMC1YFL008W TY1B-DR1Q03855 1755 aa2.51□□□□□ -2.01
SMC1YFL008W TY2B-DR3Q07791 1770 aaKnown RBP2.51□□□□□ -2.01
SMC1YFL008W TY2B-OR1Q12113 1770 aa2.51□□□□□ -2.01
SMC1YFL008W TY2B-DR1Q12472 1770 aa2.51□□□□□ -2.01
SMC1YFL008W TY2B-OR2Q12501 1770 aa2.51□□□□□ -2.01
SMC1YFL008W TY1B-DR3Q99231 1755 aa2.51□□□□□ -2.01
SMC1YFL008W PRT1P06103 763 aaKnown RBP2.51□□□□□ -2.01
SMC1YFL008W SPB4P25808 606 aaPredicted RBP2.51□□□□□ -2.01
SMC1YFL008W GCD11P32481 527 aaKnown RBP2.51□□□□□ -2.01
SMC1YFL008W RDS2P19541 446 aaKnown RBP2.51□□□□□ -2.01
SMC1YFL008W NPL4P33755 580 aa2.5□□□□□ -2.01
SMC1YFL008W LAM6Q08001 693 aa2.5□□□□□ -2.01
SMC1YFL008W PKC1P24583 1151 aa2.5□□□□□ -2.01
SMC1YFL008W TCB3Q03640 1545 aaKnown RBP2.5□□□□□ -2.01
SMC1YFL008W RPN1P38764 993 aaKnown RBP2.5□□□□□ -2.01
SMC1YFL008W TEA1P47988 759 aa2.5□□□□□ -2.01
SMC1YFL008W SPT16P32558 1035 aaKnown RBP2.49□□□□□ -2.01
SMC1YFL008W YNL115CP53925 644 aa2.49□□□□□ -2.01
SMC1YFL008W PDC1P06169 563 aaKnown RBP2.49□□□□□ -2.01
SMC1YFL008W HPC2Q01448 625 aa2.49□□□□□ -2.01
SMC1YFL008W TY2B-BQ12491 1770 aa2.49□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms