RNA–Protein interactions for RNA: YFL002C

SPB4, Transcript of Putative ATP-dependent RNA helicase, yeastyeast

Gene SPB4, Length 1,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPB4YFL002C NOB1Q08444 459 aaKnown RBP6.06□□□□□ -1.44
SPB4YFL002C CDC3P32457 520 aaKnown RBP6.05□□□□□ -1.44
SPB4YFL002C CSE4P36012 229 aa6.05□□□□□ -1.44
SPB4YFL002C DPS1P04802 557 aaKnown RBP6.04□□□□□ -1.44
SPB4YFL002C HST2P53686 357 aa6.04□□□□□ -1.44
SPB4YFL002C YNL108CP53929 270 aa6.03□□□□□ -1.44
SPB4YFL002C MVP1P40959 511 aaKnown RBP6.02□□□□□ -1.45
SPB4YFL002C SNU71P53207 620 aaKnown RBP6.02□□□□□ -1.45
SPB4YFL002C NIS1P53939 407 aa6.02□□□□□ -1.45
SPB4YFL002C RAD59Q12223 238 aa6.02□□□□□ -1.45
SPB4YFL002C SUP45P12385 437 aaKnown RBP6.02□□□□□ -1.45
SPB4YFL002C MID1P41821 548 aa6.02□□□□□ -1.45
SPB4YFL002C FPK1P53739 893 aa6.02□□□□□ -1.45
SPB4YFL002C MMP1Q12372 583 aa6.01□□□□□ -1.45
SPB4YFL002C SSF1P38789 453 aaPredicted RBP6□□□□□ -1.45
SPB4YFL002C PKH3Q03306 898 aaPredicted RBP6□□□□□ -1.45
SPB4YFL002C YMR196WQ04336 1088 aa6□□□□□ -1.45
SPB4YFL002C HEM3P28789 327 aa5.99□□□□□ -1.45
SPB4YFL002C ARH1P48360 493 aa5.99□□□□□ -1.45
SPB4YFL002C NST1P53935 1240 aa5.99□□□□□ -1.45
SPB4YFL002C PEX29Q03370 554 aa5.99□□□□□ -1.45
SPB4YFL002C GAP1P19145 602 aaPredicted RBP5.98□□□□□ -1.45
SPB4YFL002C ESS1P22696 170 aa5.98□□□□□ -1.45
SPB4YFL002C PUP1P25043 261 aa5.98□□□□□ -1.45
SPB4YFL002C NAP1P25293 417 aaKnown RBP5.98□□□□□ -1.45
SPB4YFL002C SIS2P36024 562 aa5.98□□□□□ -1.45
SPB4YFL002C SEN54Q02825 467 aaPredicted RBP5.98□□□□□ -1.45
SPB4YFL002C SCJ1P25303 377 aa5.97□□□□□ -1.45
SPB4YFL002C YML083CQ04526 418 aa5.97□□□□□ -1.45
SPB4YFL002C SPT5P27692 1063 aaKnown RBP5.96□□□□□ -1.46
SPB4YFL002C CSC1Q06538 782 aa5.96□□□□□ -1.46
SPB4YFL002C ENO1P00924 437 aaKnown RBP5.95□□□□□ -1.46
SPB4YFL002C AI4P03878 556 aa5.95□□□□□ -1.46
SPB4YFL002C MPH3P0CE00 602 aa5.95□□□□□ -1.46
SPB4YFL002C YJU3P28321 313 aa5.95□□□□□ -1.46
SPB4YFL002C PAM1P37304 830 aaKnown RBP5.95□□□□□ -1.46
SPB4YFL002C MRX10Q05648 414 aa5.95□□□□□ -1.46
SPB4YFL002C YPR109WQ06104 294 aa5.95□□□□□ -1.46
SPB4YFL002C HAT1Q12341 374 aa5.95□□□□□ -1.46
SPB4YFL002C ENO2P00925 437 aaKnown RBP5.95□□□□□ -1.46
SPB4YFL002C ARG8P18544 423 aa5.95□□□□□ -1.46
SPB4YFL002C SIT4P20604 311 aa5.95□□□□□ -1.46
SPB4YFL002C RRN6P32786 894 aa5.95□□□□□ -1.46
SPB4YFL002C SPT23P35210 1082 aa5.95□□□□□ -1.46
SPB4YFL002C RPP1BP10622 106 aaKnown RBP5.93□□□□□ -1.46
SPB4YFL002C YDJ1P25491 409 aaKnown RBP5.93□□□□□ -1.46
SPB4YFL002C MET10P39692 1035 aa5.93□□□□□ -1.46
SPB4YFL002C TGL4P36165 910 aa5.92□□□□□ -1.46
SPB4YFL002C ILV3P39522 585 aaKnown RBP5.92□□□□□ -1.46
SPB4YFL002C RSC30P38781 883 aa5.92□□□□□ -1.46
SPB4YFL002C RIM21P48565 533 aa5.92□□□□□ -1.46
SPB4YFL002C MAK16P10962 306 aaPredicted RBP5.91□□□□□ -1.46
SPB4YFL002C SLI15P38283 698 aa5.9□□□□□ -1.46
SPB4YFL002C HAP5Q02516 242 aa5.9□□□□□ -1.46
SPB4YFL002C TFB4Q12004 338 aa5.9□□□□□ -1.46
SPB4YFL002C IOC4Q04213 475 aa5.89□□□□□ -1.47
SPB4YFL002C LAM6Q08001 693 aa5.89□□□□□ -1.47
SPB4YFL002C PEP12P32854 288 aa5.88□□□□□ -1.47
SPB4YFL002C STM1P39015 273 aaKnown RBP5.88□□□□□ -1.47
SPB4YFL002C YPP1P46951 817 aa5.88□□□□□ -1.47
SPB4YFL002C RGA2Q06407 1009 aa5.88□□□□□ -1.47
SPB4YFL002C SLY41P22215 453 aa5.87□□□□□ -1.47
SPB4YFL002C ASF1P32447 279 aa5.87□□□□□ -1.47
SPB4YFL002C PTC2P39966 464 aaKnown RBP5.87□□□□□ -1.47
SPB4YFL002C PEX21P50091 288 aa5.85□□□□□ -1.47
SPB4YFL002C BNI4P53858 892 aa5.85□□□□□ -1.47
SPB4YFL002C NAF1P53919 492 aaKnown RBP5.85□□□□□ -1.47
SPB4YFL002C CDC73Q06697 393 aa5.85□□□□□ -1.47
SPB4YFL002C SEC20P28791 383 aa5.85□□□□□ -1.47
SPB4YFL002C IPL1P38991 367 aa5.85□□□□□ -1.47
SPB4YFL002C ECM23Q02710 187 aa5.85□□□□□ -1.47
SPB4YFL002C ITT1Q04638 464 aa5.85□□□□□ -1.47
SPB4YFL002C TUM1Q08686 304 aaKnown RBP5.85□□□□□ -1.47
SPB4YFL002C YNL115CP53925 644 aa5.84□□□□□ -1.47
SPB4YFL002C SRC1Q03707 834 aa5.84□□□□□ -1.47
SPB4YFL002C YBL113CQ7M4S9 792 aa5.84□□□□□ -1.47
SPB4YFL002C RDS2P19541 446 aaKnown RBP5.83□□□□□ -1.48
SPB4YFL002C BUB1P41695 1021 aaKnown RBP RIP-Chip data5.83□□□□□ -1.48not detected
SPB4YFL002C RTF1P53064 558 aa5.83□□□□□ -1.48
SPB4YFL002C MPC54Q08550 464 aa5.83□□□□□ -1.48
SPB4YFL002C YML082WQ04533 649 aaKnown RBP5.82□□□□□ -1.48
SPB4YFL002C MSC6Q08818 692 aaKnown RBP5.82□□□□□ -1.48
SPB4YFL002C ERP5P38819 212 aa5.81□□□□□ -1.48
SPB4YFL002C MCM16Q12262 181 aa5.81□□□□□ -1.48
SPB4YFL002C GAL2P13181 574 aa5.81□□□□□ -1.48
SPB4YFL002C TRM1P15565 570 aaKnown RBP5.81□□□□□ -1.48
SPB4YFL002C KTR7P40504 517 aa5.81□□□□□ -1.48
SPB4YFL002C ALD2P47771 506 aa5.8□□□□□ -1.48
SPB4YFL002C PUS6P53294 404 aa5.8□□□□□ -1.48
SPB4YFL002C NMA111P53920 997 aa5.8□□□□□ -1.48
SPB4YFL002C UBX7P38349 436 aa5.79□□□□□ -1.48
SPB4YFL002C TRL1P09880 827 aaKnown RBP5.78□□□□□ -1.48
SPB4YFL002C RRP15Q06511 250 aaPredicted RBP5.78□□□□□ -1.48
SPB4YFL002C ENV9Q08651 330 aa5.78□□□□□ -1.48
SPB4YFL002C YTA7P40340 1379 aa5.78□□□□□ -1.48
SPB4YFL002C CWC15Q03772 175 aaKnown RBP5.78□□□□□ -1.48
SPB4YFL002C KAR5Q04746 504 aa5.78□□□□□ -1.48
SPB4YFL002C YRR1Q12172 810 aa5.77□□□□□ -1.49
SPB4YFL002C TPS3P38426 1054 aaKnown RBP5.76□□□□□ -1.49
SPB4YFL002C YHL050CP38721 697 aa5.76□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms