RNA–Protein interactions for RNA: YER151C

UBP3, Transcript of Ubiquitin-specific protease involved in transport and osmotic response, yeastyeast

Gene UBP3, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP3YER151C NUD1P32336 851 aa2.55□□□□□ -2
UBP3YER151C LCB5Q06147 687 aaKnown RBP2.55□□□□□ -2
UBP3YER151C LAM6Q08001 693 aa2.55□□□□□ -2
UBP3YER151C ISM1P48526 1002 aa2.55□□□□□ -2
UBP3YER151C HED1Q03937 162 aa2.55□□□□□ -2
UBP3YER151C TUM1Q08686 304 aaKnown RBP2.55□□□□□ -2
UBP3YER151C RRN7P40992 514 aa2.54□□□□□ -2
UBP3YER151C YLR346CQ06139 101 aa2.54□□□□□ -2
UBP3YER151C SRF1Q12516 437 aa2.54□□□□□ -2
UBP3YER151C YGR035CP53222 116 aa2.54□□□□□ -2
UBP3YER151C DNF1P32660 1571 aa2.53□□□□□ -2
UBP3YER151C BDP1P46678 594 aa2.53□□□□□ -2
UBP3YER151C CAF120P53836 1060 aa2.52□□□□□ -2.01
UBP3YER151C TFB4Q12004 338 aa2.52□□□□□ -2.01
UBP3YER151C ESC1Q03661 1658 aaKnown RBP2.52□□□□□ -2.01
UBP3YER151C SPA2P23201 1466 aaKnown RBP2.52□□□□□ -2.01
UBP3YER151C STR2P47164 639 aa2.51□□□□□ -2.01
UBP3YER151C YLR326WQ06170 240 aaKnown RBP2.51□□□□□ -2.01
UBP3YER151C CSC1Q06538 782 aa2.51□□□□□ -2.01
UBP3YER151C MET5P47169 1442 aa2.51□□□□□ -2.01
UBP3YER151C DNA2P38859 1522 aa2.51□□□□□ -2.01
UBP3YER151C TRK2P28584 889 aa2.5□□□□□ -2.01
UBP3YER151C PUS1Q12211 544 aaKnown RBP2.5□□□□□ -2.01
UBP3YER151C REV3P14284 1504 aa2.5□□□□□ -2.01
UBP3YER151C PCS60P38137 543 aaKnown RBP RIP-Chip data2.5□□□□□ -2.01not detected
UBP3YER151C RRD1P40454 393 aaKnown RBP2.5□□□□□ -2.01
UBP3YER151C AFT1P22149 690 aa2.49□□□□□ -2.01
UBP3YER151C YJR115WP47152 169 aa2.48□□□□□ -2.01
UBP3YER151C MDS3P53094 1487 aa2.48□□□□□ -2.01
UBP3YER151C UBP14P38237 781 aaKnown RBP2.48□□□□□ -2.01
UBP3YER151C LTE1P07866 1435 aa2.47□□□□□ -2.01
UBP3YER151C UGA3P26370 528 aa2.47□□□□□ -2.01
UBP3YER151C XRN1P22147 1528 aaKnown RBP2.47□□□□□ -2.01
UBP3YER151C LSB3P43603 459 aaKnown RBP2.47□□□□□ -2.01
UBP3YER151C YPR204WQ08995 1032 aa2.47□□□□□ -2.01
UBP3YER151C YDL176WQ12027 708 aa2.47□□□□□ -2.01
UBP3YER151C PUS5Q06244 254 aa2.45□□□□□ -2.02
UBP3YER151C TYW1Q08960 810 aaKnown RBP2.45□□□□□ -2.02
UBP3YER151C ESP1Q03018 1630 aa2.45□□□□□ -2.02
UBP3YER151C SET1P38827 1080 aaKnown RBP2.45□□□□□ -2.02
UBP3YER151C MET32Q12041 191 aa2.45□□□□□ -2.02
UBP3YER151C SBP1P10080 294 aaKnown RBP2.44□□□□□ -2.02
UBP3YER151C GAP1P19145 602 aaPredicted RBP2.44□□□□□ -2.02
UBP3YER151C NRD1P53617 575 aaKnown RBP RIP-Chip data2.44□□□□□ -2.02not detected
UBP3YER151C EDE1P34216 1381 aa2.43□□□□□ -2.02
UBP3YER151C HSL1P34244 1518 aa2.43□□□□□ -2.02
UBP3YER151C ICP55P40051 511 aa2.43□□□□□ -2.02
UBP3YER151C SCW11P53189 542 aa2.43□□□□□ -2.02
UBP3YER151C SSN2P38931 1420 aa2.43□□□□□ -2.02
UBP3YER151C YPR109WQ06104 294 aa2.43□□□□□ -2.02
UBP3YER151C BUD4P47136 1447 aa2.42□□□□□ -2.02
UBP3YER151C TRM3Q07527 1436 aa2.42□□□□□ -2.02
UBP3YER151C YDR090CQ03193 310 aa2.42□□□□□ -2.02
UBP3YER151C KXD1P53158 218 aa2.41□□□□□ -2.02
UBP3YER151C TY1A-DR4O74302 440 aa2.41□□□□□ -2.02
UBP3YER151C TY1A-HP0C2I4 478 aaKnown RBP2.41□□□□□ -2.02
UBP3YER151C TY1A-AP0CX57 440 aa2.41□□□□□ -2.02
UBP3YER151C TY1A-PR1P0CX58 440 aa2.41□□□□□ -2.02
UBP3YER151C TY1A-ORP0CX59 440 aa2.41□□□□□ -2.02
UBP3YER151C TY1A-PR2P0CX60 440 aa2.41□□□□□ -2.02
UBP3YER151C TY1A-DR5P0CX65 440 aa2.41□□□□□ -2.02
UBP3YER151C TY1A-ER2P0CX66 440 aa2.41□□□□□ -2.02
UBP3YER151C TY1A-GR3P0CX67 440 aa2.41□□□□□ -2.02
UBP3YER151C TY1A-LR1P0CX68 440 aa2.41□□□□□ -2.02
UBP3YER151C TY1A-MR2P0CX69 440 aa2.41□□□□□ -2.02
UBP3YER151C KEX2P13134 814 aa2.41□□□□□ -2.02
UBP3YER151C ACO2P39533 789 aa2.41□□□□□ -2.02
UBP3YER151C TY1A-JR2P47099 440 aa2.41□□□□□ -2.02
UBP3YER151C TY1A-DR1Q03856 440 aa2.41□□□□□ -2.02
UBP3YER151C TY1A-ML1Q04706 440 aaKnown RBP2.41□□□□□ -2.02
UBP3YER151C OPT2Q06593 877 aa2.41□□□□□ -2.02
UBP3YER151C TY1A-BRQ12217 440 aa2.41□□□□□ -2.02
UBP3YER151C TY1A-NL2Q12470 440 aa2.41□□□□□ -2.02
UBP3YER151C TY1A-GR2Q12485 440 aa2.41□□□□□ -2.02
UBP3YER151C MIP1P15801 1254 aa2.4□□□□□ -2.02
UBP3YER151C SEC2P17065 759 aa2.4□□□□□ -2.02
UBP3YER151C KIP2P28743 706 aa2.4□□□□□ -2.03
UBP3YER151C HPF1Q05164 967 aa2.4□□□□□ -2.03
UBP3YER151C PHM7Q12252 991 aa2.4□□□□□ -2.03
UBP3YER151C SYH1Q02875 849 aaKnown RBP2.4□□□□□ -2.03
UBP3YER151C PTK2P47116 818 aaKnown RBP2.39□□□□□ -2.03
UBP3YER151C ATG2P53855 1592 aa2.39□□□□□ -2.03
UBP3YER151C YIR007WP40566 764 aa2.38□□□□□ -2.03
UBP3YER151C RKR1Q04781 1562 aa2.38□□□□□ -2.03
UBP3YER151C YCF1P39109 1515 aaKnown RBP2.38□□□□□ -2.03
UBP3YER151C GLY1P37303 387 aaKnown RBP2.38□□□□□ -2.03
UBP3YER151C MSB3P48566 633 aaPredicted RBP2.38□□□□□ -2.03
UBP3YER151C BUD3P25558 1636 aa2.38□□□□□ -2.03
UBP3YER151C REF2P42073 533 aaPredicted RBP2.37□□□□□ -2.03
UBP3YER151C NUP85P46673 744 aa2.37□□□□□ -2.03
UBP3YER151C YOR093CQ12275 1648 aa2.36□□□□□ -2.03
UBP3YER151C PAC1P39946 494 aaKnown RBP2.36□□□□□ -2.03
UBP3YER151C NSG2P53898 299 aa2.36□□□□□ -2.03
UBP3YER151C UBP2Q01476 1272 aa2.36□□□□□ -2.03
UBP3YER151C LSC2P53312 427 aa2.36□□□□□ -2.03
UBP3YER151C YPR148CQ06523 435 aa2.36□□□□□ -2.03
UBP3YER151C RPA190P10964 1664 aaKnown RBP2.36□□□□□ -2.03
UBP3YER151C SGS1P35187 1447 aa2.36□□□□□ -2.03
UBP3YER151C BPT1P14772 1559 aa2.36□□□□□ -2.03
UBP3YER151C MVP1P40959 511 aaKnown RBP2.35□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 646.3 ms