RNA–Protein interactions for RNA: YER111C

SWI4, Transcript of DNA binding component of the SBF complex (Swi4p-Swi6p), yeastyeast

Gene SWI4, Length 3,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI4YER111C HAT1Q12341 374 aa2.09□□□□□ -2.07
SWI4YER111C ENO2P00925 437 aaKnown RBP2.09□□□□□ -2.08
SWI4YER111C TRP5P00931 707 aaKnown RBP2.09□□□□□ -2.08
SWI4YER111C PTC4P38089 393 aa2.09□□□□□ -2.08
SWI4YER111C ULI1P43604 169 aa2.09□□□□□ -2.08
SWI4YER111C MSB4Q12317 492 aa2.09□□□□□ -2.08
SWI4YER111C EAP1P36041 632 aaKnown RBP2.08□□□□□ -2.08
SWI4YER111C NOP7P53261 605 aaKnown RBP2.08□□□□□ -2.08
SWI4YER111C PML39Q03760 334 aa2.08□□□□□ -2.08
SWI4YER111C NOB1Q08444 459 aaKnown RBP2.08□□□□□ -2.08
SWI4YER111C MST1P07236 462 aa2.08□□□□□ -2.08
SWI4YER111C NST1P53935 1240 aa2.08□□□□□ -2.08
SWI4YER111C LAM6Q08001 693 aa2.08□□□□□ -2.08
SWI4YER111C KEX2P13134 814 aa2.08□□□□□ -2.08
SWI4YER111C GCD11P32481 527 aaKnown RBP2.08□□□□□ -2.08
SWI4YER111C TFG1P41895 735 aaPredicted RBP2.08□□□□□ -2.08
SWI4YER111C YNL115CP53925 644 aa2.08□□□□□ -2.08
SWI4YER111C ECM23Q02710 187 aa2.08□□□□□ -2.08
SWI4YER111C DPL1Q05567 589 aa2.08□□□□□ -2.08
SWI4YER111C SUP45P12385 437 aaKnown RBP2.07□□□□□ -2.08
SWI4YER111C MRX12P47084 519 aa2.07□□□□□ -2.08
SWI4YER111C TRM1P15565 570 aaKnown RBP2.07□□□□□ -2.08
SWI4YER111C SIT4P20604 311 aa2.07□□□□□ -2.08
SWI4YER111C PUP1P25043 261 aa2.07□□□□□ -2.08
SWI4YER111C ISF1P32488 338 aa2.07□□□□□ -2.08
SWI4YER111C TGL4P36165 910 aa2.07□□□□□ -2.08
SWI4YER111C PUS6P53294 404 aa2.07□□□□□ -2.08
SWI4YER111C SPP1Q03012 353 aa2.07□□□□□ -2.08
SWI4YER111C JIP4Q03361 876 aa2.07□□□□□ -2.08
SWI4YER111C RGA2Q06407 1009 aa2.07□□□□□ -2.08
SWI4YER111C NOP8Q08287 484 aaPredicted RBP2.07□□□□□ -2.08
SWI4YER111C SPT5P27692 1063 aaKnown RBP2.06□□□□□ -2.08
SWI4YER111C UBX7P38349 436 aa2.06□□□□□ -2.08
SWI4YER111C MPC54Q08550 464 aa2.06□□□□□ -2.08
SWI4YER111C ISU2Q12056 156 aa2.06□□□□□ -2.08
SWI4YER111C YBL029C-AQ3E756 94 aa2.06□□□□□ -2.08
SWI4YER111C AIM44Q99299 758 aa2.06□□□□□ -2.08
SWI4YER111C MAK16P10962 306 aaPredicted RBP2.06□□□□□ -2.08
SWI4YER111C NUD1P32336 851 aa2.06□□□□□ -2.08
SWI4YER111C YPP1P46951 817 aa2.06□□□□□ -2.08
SWI4YER111C NMA111P53920 997 aa2.06□□□□□ -2.08
SWI4YER111C ERF2Q06551 359 aa2.06□□□□□ -2.08
SWI4YER111C GAP1P19145 602 aaPredicted RBP2.06□□□□□ -2.08
SWI4YER111C MET10P39692 1035 aa2.06□□□□□ -2.08
SWI4YER111C SIS2P36024 562 aa2.05□□□□□ -2.08
SWI4YER111C TIF11P38912 153 aaKnown RBP2.05□□□□□ -2.08
SWI4YER111C UBP9P39967 754 aa2.05□□□□□ -2.08
SWI4YER111C THI12P42883 340 aa2.05□□□□□ -2.08
SWI4YER111C THI5P43534 340 aa2.05□□□□□ -2.08
SWI4YER111C THI11P47183 340 aa2.05□□□□□ -2.08
SWI4YER111C SNU71P53207 620 aaKnown RBP2.05□□□□□ -2.08
SWI4YER111C THI13Q07748 340 aa2.05□□□□□ -2.08
SWI4YER111C EMP47P43555 445 aa2.04□□□□□ -2.08
SWI4YER111C YNL035CP53962 389 aaKnown RBP2.04□□□□□ -2.08
SWI4YER111C MRX10Q05648 414 aa2.04□□□□□ -2.08
SWI4YER111C MCM16Q12262 181 aa2.04□□□□□ -2.08
SWI4YER111C YDL206WQ12424 762 aa2.04□□□□□ -2.08
SWI4YER111C PDR1P12383 1068 aa2.04□□□□□ -2.08
SWI4YER111C HEM3P28789 327 aa2.04□□□□□ -2.08
SWI4YER111C VNX1P42839 908 aa2.04□□□□□ -2.08
SWI4YER111C RIM21P48565 533 aa2.04□□□□□ -2.08
SWI4YER111C RTG1P32607 177 aa2.04□□□□□ -2.08
SWI4YER111C RSC30P38781 883 aa2.04□□□□□ -2.08
SWI4YER111C SSF1P38789 453 aaPredicted RBP2.04□□□□□ -2.08
SWI4YER111C BUB1P41695 1021 aaKnown RBP RIP-Chip data2.04□□□□□ -2.08not detected
SWI4YER111C RTF1P53064 558 aa2.04□□□□□ -2.08
SWI4YER111C YBL113CQ7M4S9 792 aa2.04□□□□□ -2.08
SWI4YER111C ISM1P48526 1002 aa2.03□□□□□ -2.08
SWI4YER111C ITT1Q04638 464 aa2.03□□□□□ -2.08
SWI4YER111C KAR5Q04746 504 aa2.03□□□□□ -2.08
SWI4YER111C GAL2P13181 574 aa2.03□□□□□ -2.08
SWI4YER111C GUT2P32191 649 aa2.03□□□□□ -2.08
SWI4YER111C RRN6P32786 894 aa2.03□□□□□ -2.08
SWI4YER111C GRS1P38088 690 aaKnown RBP2.03□□□□□ -2.08
SWI4YER111C STE20Q03497 939 aaKnown RBP2.03□□□□□ -2.08
SWI4YER111C STM1P39015 273 aaKnown RBP2.02□□□□□ -2.09
SWI4YER111C ELP4Q02884 456 aaKnown RBP2.02□□□□□ -2.09
SWI4YER111C YEL077CQ3E7X8 1277 aa2.02□□□□□ -2.09
SWI4YER111C TEC1P18412 486 aa2.02□□□□□ -2.09
SWI4YER111C RAM1P22007 431 aa2.02□□□□□ -2.09
SWI4YER111C SOH1P38633 127 aa2.02□□□□□ -2.09
SWI4YER111C ATG3P40344 310 aa2.02□□□□□ -2.09
SWI4YER111C KXD1P53158 218 aa2.02□□□□□ -2.09
SWI4YER111C NAF1P53919 492 aaKnown RBP2.02□□□□□ -2.09
SWI4YER111C ALR1Q08269 859 aa2.02□□□□□ -2.09
SWI4YER111C NCR1Q12200 1170 aa2.02□□□□□ -2.09
SWI4YER111C LDB19Q12502 818 aa2.02□□□□□ -2.09
SWI4YER111C PAT1P25644 796 aaKnown RBP2.02□□□□□ -2.09
SWI4YER111C SAP30P38429 201 aa2.02□□□□□ -2.09
SWI4YER111C ERP5P38819 212 aa2.02□□□□□ -2.09
SWI4YER111C IPL1P38991 367 aa2.02□□□□□ -2.09
SWI4YER111C TUB4P53378 473 aa2.02□□□□□ -2.09
SWI4YER111C PUN1Q06991 263 aa2.02□□□□□ -2.09
SWI4YER111C PDI1P17967 522 aaKnown RBP2.01□□□□□ -2.09
SWI4YER111C YDL129WQ07555 291 aa2.01□□□□□ -2.09
SWI4YER111C PEP12P32854 288 aa2.01□□□□□ -2.09
SWI4YER111C HAP5Q02516 242 aa2.01□□□□□ -2.09
SWI4YER111C RDS2P19541 446 aaKnown RBP2□□□□□ -2.09
SWI4YER111C SEC20P28791 383 aa2□□□□□ -2.09
SWI4YER111C RRN7P40992 514 aa2□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 69.4 ms