RNA–Protein interactions for RNA: YDR135C

YCF1, Transcript of Vacuolar glutathione S-conjugate transporter, yeastyeast

Gene YCF1, Length 4,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCF1YDR135C MNN4P36044 1178 aa5.07□□□□□ -1.6
YCF1YDR135C YRF1-1P0CX20 1796 aa5.07□□□□□ -1.6
YCF1YDR135C YRF1-5P0CX21 1796 aa5.07□□□□□ -1.6
YCF1YDR135C YRF1-8P0CX22 1796 aa5.07□□□□□ -1.6
YCF1YDR135C DNF3Q12674 1656 aa5.06□□□□□ -1.6
YCF1YDR135C RAV1P47104 1357 aa5.06□□□□□ -1.6
YCF1YDR135C YEF3P16521 1044 aaKnown RBP5.05□□□□□ -1.6
YCF1YDR135C FPR3P38911 411 aaKnown RBP5.05□□□□□ -1.6
YCF1YDR135C NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.05□□□□□ -1.6not detected
YCF1YDR135C TRK1P12685 1235 aa5.04□□□□□ -1.6
YCF1YDR135C RTC1Q08281 1341 aa5.04□□□□□ -1.6
YCF1YDR135C NAP1P25293 417 aaKnown RBP5.04□□□□□ -1.6
YCF1YDR135C TEA1P47988 759 aa5.04□□□□□ -1.6
YCF1YDR135C YDL144CQ07589 356 aa5.04□□□□□ -1.6
YCF1YDR135C DUR1,2P32528 1835 aaKnown RBP5.03□□□□□ -1.6
YCF1YDR135C DRS2P39524 1355 aa5.03□□□□□ -1.6
YCF1YDR135C LSP1Q12230 341 aaKnown RBP5.03□□□□□ -1.6
YCF1YDR135C YPP1P46951 817 aa5.03□□□□□ -1.6
YCF1YDR135C RLF2Q12495 606 aa5.03□□□□□ -1.6
YCF1YDR135C VPS24P36095 224 aaKnown RBP5.02□□□□□ -1.61
YCF1YDR135C YRB30P53107 440 aaPredicted RBP5.02□□□□□ -1.61
YCF1YDR135C NOP53Q12080 455 aaKnown RBP5.02□□□□□ -1.61
YCF1YDR135C RRP46P53256 223 aaPredicted RBP5.02□□□□□ -1.61
YCF1YDR135C ARL1P38116 183 aaKnown RBP5.01□□□□□ -1.61
YCF1YDR135C CWC22P53333 577 aaKnown RBP5.01□□□□□ -1.61
YCF1YDR135C MET5P47169 1442 aa5.01□□□□□ -1.61
YCF1YDR135C QCR6P00127 147 aa5□□□□□ -1.61
YCF1YDR135C SEC7P11075 2009 aaKnown RBP5□□□□□ -1.61
YCF1YDR135C CKB1P43639 278 aa5□□□□□ -1.61
YCF1YDR135C BUD21Q08492 214 aaPredicted RBP5□□□□□ -1.61
YCF1YDR135C TAF5P38129 798 aa5□□□□□ -1.61
YCF1YDR135C RTG3P38165 486 aa4.99□□□□□ -1.61
YCF1YDR135C YIL092WP40497 633 aa4.99□□□□□ -1.61
YCF1YDR135C ROM2P51862 1356 aaKnown RBP4.99□□□□□ -1.61
YCF1YDR135C MPP10P47083 593 aaKnown RBP4.99□□□□□ -1.61
YCF1YDR135C NOP58Q12499 511 aaKnown RBP4.99□□□□□ -1.61
YCF1YDR135C NUP188P52593 1655 aaKnown RBP4.99□□□□□ -1.61
YCF1YDR135C YML133CQ03099 1374 aa4.99□□□□□ -1.61
YCF1YDR135C YLL067CQ07888 1374 aa4.99□□□□□ -1.61
YCF1YDR135C YLL066CQ99208 1374 aa4.99□□□□□ -1.61
YCF1YDR135C RAD26P40352 1085 aa4.98□□□□□ -1.61
YCF1YDR135C POL32P47110 350 aa4.98□□□□□ -1.61
YCF1YDR135C HAP5Q02516 242 aa4.98□□□□□ -1.61
YCF1YDR135C AIM44Q99299 758 aa4.98□□□□□ -1.61
YCF1YDR135C KRE33P53914 1056 aaKnown RBP4.97□□□□□ -1.61
YCF1YDR135C SAP155P43612 1002 aa4.96□□□□□ -1.61
YCF1YDR135C RRT14P40470 206 aa4.96□□□□□ -1.62
YCF1YDR135C ENV11P53246 860 aa4.96□□□□□ -1.62
YCF1YDR135C RKM3P38222 552 aa4.95□□□□□ -1.62
YCF1YDR135C FKH1P40466 484 aa4.95□□□□□ -1.62
YCF1YDR135C HEF3P53978 1044 aaKnown RBP4.95□□□□□ -1.62
YCF1YDR135C RPN1P38764 993 aaKnown RBP4.95□□□□□ -1.62
YCF1YDR135C PIL1P53252 339 aaKnown RBP4.95□□□□□ -1.62
YCF1YDR135C PSK1P31374 1356 aa4.95□□□□□ -1.62
YCF1YDR135C NUP145P49687 1317 aa4.95□□□□□ -1.62
YCF1YDR135C NUG1P40010 520 aaKnown RBP4.95□□□□□ -1.62
YCF1YDR135C USO1P25386 1790 aa4.94□□□□□ -1.62
YCF1YDR135C MCM2P29469 868 aa4.94□□□□□ -1.62
YCF1YDR135C TY1B-NL2Q99337 1749 aaKnown RBP4.94□□□□□ -1.62
YCF1YDR135C CIR1P42940 261 aa4.94□□□□□ -1.62
YCF1YDR135C KRE5P22023 1365 aa4.94□□□□□ -1.62
YCF1YDR135C YAP3P38749 330 aa4.93□□□□□ -1.62
YCF1YDR135C THI22Q06490 572 aa4.93□□□□□ -1.62
YCF1YDR135C DAL5P15365 543 aa4.93□□□□□ -1.62
YCF1YDR135C RSC1P53236 928 aa4.93□□□□□ -1.62
YCF1YDR135C RPS0BP46654 252 aaKnown RBP4.93□□□□□ -1.62
YCF1YDR135C LCD1Q04377 747 aa4.93□□□□□ -1.62
YCF1YDR135C YRF1-4O13559 1382 aa4.93□□□□□ -1.62
YCF1YDR135C ILV3P39522 585 aaKnown RBP4.93□□□□□ -1.62
YCF1YDR135C ESL2P36168 1195 aa4.92□□□□□ -1.62
YCF1YDR135C ITC1P53125 1264 aa4.92□□□□□ -1.62
YCF1YDR135C CIN4P39110 191 aa4.91□□□□□ -1.62
YCF1YDR135C SMC3P47037 1230 aa4.91□□□□□ -1.62
YCF1YDR135C MED8P38304 223 aa4.91□□□□□ -1.62
YCF1YDR135C SIR4P11978 1358 aa4.91□□□□□ -1.62
YCF1YDR135C RAD2P07276 1031 aa4.91□□□□□ -1.62
YCF1YDR135C SRS2P12954 1174 aa4.91□□□□□ -1.62
YCF1YDR135C SPE2P21182 396 aa4.91□□□□□ -1.62
YCF1YDR135C BMS1Q08965 1183 aaKnown RBP4.9□□□□□ -1.62
YCF1YDR135C NPA3P47122 385 aa4.9□□□□□ -1.63
YCF1YDR135C BCK1Q01389 1478 aa4.9□□□□□ -1.63
YCF1YDR135C SPC110P32380 944 aa4.89□□□□□ -1.63
YCF1YDR135C SIC1P38634 284 aa4.89□□□□□ -1.63
YCF1YDR135C ECM1P39715 212 aa4.89□□□□□ -1.63
YCF1YDR135C BDH2P39713 417 aa4.89□□□□□ -1.63
YCF1YDR135C BNR1P40450 1375 aa4.88□□□□□ -1.63
YCF1YDR135C TPD3P31383 635 aa4.88□□□□□ -1.63
YCF1YDR135C PRD1P25375 712 aa4.88□□□□□ -1.63
YCF1YDR135C CLB5P30283 435 aa4.88□□□□□ -1.63
YCF1YDR135C HOS3Q02959 697 aaKnown RBP4.88□□□□□ -1.63
YCF1YDR135C NOP14Q99207 810 aaKnown RBP4.88□□□□□ -1.63
YCF1YDR135C BUD27P43573 796 aaKnown RBP RIP-Chip data4.87□□□□□ -1.63not detected
YCF1YDR135C PUF6Q04373 656 aaKnown RBP4.87□□□□□ -1.63
YCF1YDR135C MET10P39692 1035 aa4.87□□□□□ -1.63
YCF1YDR135C RVS167P39743 482 aaKnown RBP4.87□□□□□ -1.63
YCF1YDR135C RPN12P32496 274 aa4.87□□□□□ -1.63
YCF1YDR135C MPE1P35728 441 aaKnown RBP4.87□□□□□ -1.63
YCF1YDR135C RTT109Q07794 436 aa4.87□□□□□ -1.63
YCF1YDR135C YRF1-2P40105 1681 aa4.87□□□□□ -1.63
YCF1YDR135C TPM2P40414 161 aa4.87□□□□□ -1.63
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms