RNA–Protein interactions for RNA: YDR073W

SNF11, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF11, Length 510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF11YDR073W JIP4Q03361 876 aa8.22□□□□□ -1.09
SNF11YDR073W HAT1Q12341 374 aa8.22□□□□□ -1.09
SNF11YDR073W RRN6P32786 894 aa8.21□□□□□ -1.1
SNF11YDR073W MMP1Q12372 583 aa8.21□□□□□ -1.1
SNF11YDR073W FPK1P53739 893 aa8.2□□□□□ -1.1
SNF11YDR073W NIS1P53939 407 aa8.2□□□□□ -1.1
SNF11YDR073W PAM1P37304 830 aaKnown RBP8.19□□□□□ -1.1
SNF11YDR073W NST1P53935 1240 aa8.19□□□□□ -1.1
SNF11YDR073W SEN54Q02825 467 aaPredicted RBP8.19□□□□□ -1.1
SNF11YDR073W YML083CQ04526 418 aa8.19□□□□□ -1.1
SNF11YDR073W SUP45P12385 437 aaKnown RBP8.18□□□□□ -1.1
SNF11YDR073W ESS1P22696 170 aa8.18□□□□□ -1.1
SNF11YDR073W PUP1P25043 261 aa8.18□□□□□ -1.1
SNF11YDR073W MVP1P40959 511 aaKnown RBP8.17□□□□□ -1.1
SNF11YDR073W ENO1P00924 437 aaKnown RBP8.16□□□□□ -1.1
SNF11YDR073W ARG8P18544 423 aa8.16□□□□□ -1.1
SNF11YDR073W SPT5P27692 1063 aaKnown RBP8.16□□□□□ -1.1
SNF11YDR073W DCW1P36091 449 aa8.16□□□□□ -1.1
SNF11YDR073W ENO2P00925 437 aaKnown RBP8.14□□□□□ -1.11
SNF11YDR073W AI4P03878 556 aa8.14□□□□□ -1.11
SNF11YDR073W SCJ1P25303 377 aa8.14□□□□□ -1.11
SNF11YDR073W MPH3P0CE00 602 aa8.13□□□□□ -1.11
SNF11YDR073W RPP1BP10622 106 aaKnown RBP8.13□□□□□ -1.11
SNF11YDR073W YJU3P28321 313 aa8.12□□□□□ -1.11
SNF11YDR073W ASF1P32447 279 aa8.12□□□□□ -1.11
SNF11YDR073W TGL4P36165 910 aa8.12□□□□□ -1.11
SNF11YDR073W PTC4P38089 393 aa8.12□□□□□ -1.11
SNF11YDR073W TFG1P41895 735 aaPredicted RBP8.12□□□□□ -1.11
SNF11YDR073W ITT1Q04638 464 aa8.12□□□□□ -1.11
SNF11YDR073W YDJ1P25491 409 aaKnown RBP8.11□□□□□ -1.11
SNF11YDR073W STM1P39015 273 aaKnown RBP8.11□□□□□ -1.11
SNF11YDR073W YPR109WQ06104 294 aa8.11□□□□□ -1.11
SNF11YDR073W CSC1Q06538 782 aa8.11□□□□□ -1.11
SNF11YDR073W YEL023CP39992 682 aa8.1□□□□□ -1.11
SNF11YDR073W MRX10Q05648 414 aa8.1□□□□□ -1.11
SNF11YDR073W YDL129WQ07555 291 aa8.1□□□□□ -1.11
SNF11YDR073W RIM21P48565 533 aa8.09□□□□□ -1.11
SNF11YDR073W MAK16P10962 306 aaPredicted RBP8.08□□□□□ -1.12
SNF11YDR073W GAP1P19145 602 aaPredicted RBP8.08□□□□□ -1.12
SNF11YDR073W SEC20P28791 383 aa8.08□□□□□ -1.12
SNF11YDR073W ILV3P39522 585 aaKnown RBP8.08□□□□□ -1.12
SNF11YDR073W IPL1P38991 367 aa8.06□□□□□ -1.12
SNF11YDR073W YPP1P46951 817 aa8.06□□□□□ -1.12
SNF11YDR073W SIT4P20604 311 aa8.05□□□□□ -1.12
SNF11YDR073W CHL1P22516 861 aaPredicted RBP8.05□□□□□ -1.12
SNF11YDR073W SAP30P38429 201 aa8.05□□□□□ -1.12
SNF11YDR073W LAM6Q08001 693 aa8.05□□□□□ -1.12
SNF11YDR073W YBL113CQ7M4S9 792 aa8.05□□□□□ -1.12
SNF11YDR073W PEX21P50091 288 aa8.04□□□□□ -1.12
SNF11YDR073W ECM23Q02710 187 aa8.04□□□□□ -1.12
SNF11YDR073W YTA7P40340 1379 aa8.03□□□□□ -1.12
SNF11YDR073W TFB4Q12004 338 aa8.03□□□□□ -1.12
SNF11YDR073W SLY41P22215 453 aa8.02□□□□□ -1.13
SNF11YDR073W SLI15P38283 698 aa8.02□□□□□ -1.13
SNF11YDR073W KTR7P40504 517 aa8.02□□□□□ -1.13
SNF11YDR073W PRE3P38624 215 aa8.01□□□□□ -1.13
SNF11YDR073W RSC30P38781 883 aa8□□□□□ -1.13
SNF11YDR073W PEP12P32854 288 aa7.99□□□□□ -1.13
SNF11YDR073W ERP5P38819 212 aa7.99□□□□□ -1.13
SNF11YDR073W BCK2P33306 851 aa7.98□□□□□ -1.13
SNF11YDR073W UBX7P38349 436 aa7.98□□□□□ -1.13
SNF11YDR073W NAF1P53919 492 aaKnown RBP7.98□□□□□ -1.13
SNF11YDR073W KAR5Q04746 504 aa7.98□□□□□ -1.13
SNF11YDR073W MSC6Q08818 692 aaKnown RBP7.98□□□□□ -1.13
SNF11YDR073W ALD2P47771 506 aa7.97□□□□□ -1.13
SNF11YDR073W TUM1Q08686 304 aaKnown RBP7.97□□□□□ -1.13
SNF11YDR073W CDC73Q06697 393 aa7.96□□□□□ -1.14
SNF11YDR073W ENV9Q08651 330 aa7.96□□□□□ -1.14
SNF11YDR073W MCM16Q12262 181 aa7.96□□□□□ -1.14
SNF11YDR073W BRN1P38170 754 aa7.95□□□□□ -1.14
SNF11YDR073W POL32P47110 350 aa7.95□□□□□ -1.14
SNF11YDR073W GAL2P13181 574 aa7.94□□□□□ -1.14
SNF11YDR073W TRM1P15565 570 aaKnown RBP7.94□□□□□ -1.14
SNF11YDR073W RDS2P19541 446 aaKnown RBP7.94□□□□□ -1.14
SNF11YDR073W YNL115CP53925 644 aa7.94□□□□□ -1.14
SNF11YDR073W YHL050CP38721 697 aa7.93□□□□□ -1.14
SNF11YDR073W OCA5P38738 679 aa7.93□□□□□ -1.14
SNF11YDR073W YHR219WP38900 624 aa7.93□□□□□ -1.14
SNF11YDR073W RTF1P53064 558 aa7.93□□□□□ -1.14
SNF11YDR073W YEL077CQ3E7X8 1277 aa7.93□□□□□ -1.14
SNF11YDR073W GRS1P38088 690 aaKnown RBP7.92□□□□□ -1.14
SNF11YDR073W THI12P42883 340 aa7.92□□□□□ -1.14
SNF11YDR073W THI5P43534 340 aa7.92□□□□□ -1.14
SNF11YDR073W THI11P47183 340 aa7.92□□□□□ -1.14
SNF11YDR073W SVF1Q05515 481 aa7.92□□□□□ -1.14
SNF11YDR073W THI13Q07748 340 aa7.92□□□□□ -1.14
SNF11YDR073W BUB1P41695 1021 aaKnown RBP RIP-Chip data7.91□□□□□ -1.14not detected
SNF11YDR073W NNF1P47149 201 aa7.9□□□□□ -1.14
SNF11YDR073W PUS6P53294 404 aa7.9□□□□□ -1.14
SNF11YDR073W TBF1Q02457 562 aa7.9□□□□□ -1.14
SNF11YDR073W RRP15Q06511 250 aaPredicted RBP7.9□□□□□ -1.14
SNF11YDR073W ISF1P32488 338 aa7.89□□□□□ -1.15
SNF11YDR073W PPX1P38698 397 aa7.89□□□□□ -1.15
SNF11YDR073W PML39Q03760 334 aa7.89□□□□□ -1.15
SNF11YDR073W FPR4Q06205 392 aaPredicted RBP7.89□□□□□ -1.15
SNF11YDR073W ATE1P16639 503 aa7.88□□□□□ -1.15
SNF11YDR073W TPS3P38426 1054 aaKnown RBP7.88□□□□□ -1.15
SNF11YDR073W PEX29Q03370 554 aa7.88□□□□□ -1.15
SNF11YDR073W PUF6Q04373 656 aaKnown RBP7.88□□□□□ -1.15
SNF11YDR073W TRL1P09880 827 aaKnown RBP7.87□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms