RNA–Protein interactions for RNA: YDR047W

HEM12, Transcript of Uroporphyrinogen decarboxylase, yeastyeast

Gene HEM12, Length 1,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HEM12YDR047W RCM1P53972 490 aa14.23□□□□□ -0.13
HEM12YDR047W TY1B-NL2Q99337 1749 aaKnown RBP14.22□□□□□ -0.13
HEM12YDR047W YML133CQ03099 1374 aa14.2□□□□□ -0.14
HEM12YDR047W YLL067CQ07888 1374 aa14.2□□□□□ -0.14
HEM12YDR047W YLL066CQ99208 1374 aa14.2□□□□□ -0.14
HEM12YDR047W PPH3P32345 308 aa14.19□□□□□ -0.14
HEM12YDR047W CPS1P27614 576 aa14.16□□□□□ -0.14
HEM12YDR047W YMR196WQ04336 1088 aa14.16□□□□□ -0.14
HEM12YDR047W PRS1P32895 427 aaKnown RBP14.15□□□□□ -0.14
HEM12YDR047W MLP1Q02455 1875 aaKnown RBP14.14□□□□□ -0.15
HEM12YDR047W IOC4Q04213 475 aa14.1□□□□□ -0.15
HEM12YDR047W LEU2P04173 364 aaPredicted RBP14.09□□□□□ -0.15
HEM12YDR047W USO1P25386 1790 aa14.09□□□□□ -0.15
HEM12YDR047W YEF3P16521 1044 aaKnown RBP14.08□□□□□ -0.16
HEM12YDR047W MTR4P47047 1073 aaKnown RBP14.07□□□□□ -0.16
HEM12YDR047W TRK1P12685 1235 aa14.06□□□□□ -0.16
HEM12YDR047W PDI1P17967 522 aaKnown RBP14.05□□□□□ -0.16
HEM12YDR047W MIF2P35201 549 aa14.05□□□□□ -0.16
HEM12YDR047W THI12P42883 340 aa14.04□□□□□ -0.16
HEM12YDR047W THI5P43534 340 aa14.04□□□□□ -0.16
HEM12YDR047W THI11P47183 340 aa14.04□□□□□ -0.16
HEM12YDR047W TAP42Q04372 366 aa14.04□□□□□ -0.16
HEM12YDR047W THI13Q07748 340 aa14.04□□□□□ -0.16
HEM12YDR047W RPP0P05317 312 aaKnown RBP14.01□□□□□ -0.17
HEM12YDR047W ADE6P38972 1358 aaKnown RBP14□□□□□ -0.17
HEM12YDR047W RTF1P53064 558 aa14□□□□□ -0.17
HEM12YDR047W KAR2P16474 682 aaKnown RBP13.99□□□□□ -0.17
HEM12YDR047W GRX4P32642 244 aa13.98□□□□□ -0.17
HEM12YDR047W NOP2P40991 618 aaKnown RBP13.98□□□□□ -0.17
HEM12YDR047W PRP43P53131 767 aaKnown RBP13.98□□□□□ -0.17
HEM12YDR047W CSE4P36012 229 aa13.95□□□□□ -0.18
HEM12YDR047W VPS27P40343 622 aaKnown RBP13.95□□□□□ -0.18
HEM12YDR047W YDL144CQ07589 356 aa13.95□□□□□ -0.18
HEM12YDR047W CDC45Q08032 650 aa13.95□□□□□ -0.18
HEM12YDR047W AUS1Q08409 1394 aa13.94□□□□□ -0.18
HEM12YDR047W RPS24AP0CX31 135 aaKnown RBP13.93□□□□□ -0.18
HEM12YDR047W RPS24BP0CX32 135 aaKnown RBP13.93□□□□□ -0.18
HEM12YDR047W HIM1Q06674 414 aa13.93□□□□□ -0.18
HEM12YDR047W RRP46P53256 223 aaPredicted RBP13.9□□□□□ -0.18
HEM12YDR047W RTR1P40084 226 aaPredicted RBP13.88□□□□□ -0.19
HEM12YDR047W PAP2P53632 584 aaKnown RBP13.88□□□□□ -0.19
HEM12YDR047W SNF2P22082 1703 aa13.87□□□□□ -0.19
HEM12YDR047W MPP10P47083 593 aaKnown RBP13.86□□□□□ -0.19
HEM12YDR047W GAS4Q08271 471 aa13.86□□□□□ -0.19
HEM12YDR047W DPS1P04802 557 aaKnown RBP13.85□□□□□ -0.19
HEM12YDR047W RPO41P13433 1351 aaKnown RBP13.83□□□□□ -0.19
HEM12YDR047W YRB30P53107 440 aaPredicted RBP13.83□□□□□ -0.2
HEM12YDR047W RVB2Q12464 471 aaKnown RBP13.83□□□□□ -0.2
HEM12YDR047W SUI2P20459 304 aaKnown RBP13.81□□□□□ -0.2
HEM12YDR047W PRD1P25375 712 aa13.81□□□□□ -0.2
HEM12YDR047W PTP3P40048 928 aa13.78□□□□□ -0.2
HEM12YDR047W PRP5P21372 849 aaPredicted RBP13.76□□□□□ -0.21
HEM12YDR047W SAP155P43612 1002 aa13.76□□□□□ -0.21
HEM12YDR047W THI22Q06490 572 aa13.76□□□□□ -0.21
HEM12YDR047W TY4B-HP0C2J7 1802 aa13.76□□□□□ -0.21
HEM12YDR047W TY4B-JP47024 1803 aa13.76□□□□□ -0.21
HEM12YDR047W PRP45P28004 379 aaPredicted RBP13.74□□□□□ -0.21
HEM12YDR047W AKL1P38080 1108 aaKnown RBP13.73□□□□□ -0.21
HEM12YDR047W BUB1P41695 1021 aaKnown RBP RIP-Chip data13.73□□□□□ -0.21not detected
HEM12YDR047W TPD3P31383 635 aa13.72□□□□□ -0.21
HEM12YDR047W FUN12P39730 1002 aaKnown RBP13.71□□□□□ -0.21
HEM12YDR047W NAB6Q03735 1134 aaKnown RBP RIP-Chip data13.71□□□□□ -0.21not detected
HEM12YDR047W SLM3Q12093 417 aa13.71□□□□□ -0.21
HEM12YDR047W YRF1-2P40105 1681 aa13.71□□□□□ -0.21
HEM12YDR047W HEF3P53978 1044 aaKnown RBP13.7□□□□□ -0.22
HEM12YDR047W MSB3P48566 633 aaPredicted RBP13.69□□□□□ -0.22
HEM12YDR047W YRF1-4O13559 1382 aa13.69□□□□□ -0.22
HEM12YDR047W DSD1P53095 428 aa13.68□□□□□ -0.22
HEM12YDR047W RTT109Q07794 436 aa13.67□□□□□ -0.22
HEM12YDR047W APC1P53886 1748 aa13.66□□□□□ -0.22
HEM12YDR047W SIR4P11978 1358 aa13.66□□□□□ -0.22
HEM12YDR047W YFR006WP43590 535 aa13.65□□□□□ -0.22
HEM12YDR047W TCB1Q12466 1186 aa13.64□□□□□ -0.23
HEM12YDR047W RRP5Q05022 1729 aaKnown RBP13.64□□□□□ -0.23
HEM12YDR047W YNL050CP53952 270 aa13.63□□□□□ -0.23
HEM12YDR047W RAD2P07276 1031 aa13.62□□□□□ -0.23
HEM12YDR047W NTH2P35172 780 aa13.62□□□□□ -0.23
HEM12YDR047W FPR3P38911 411 aaKnown RBP13.62□□□□□ -0.23
HEM12YDR047W YIL177CP40434 1758 aa13.61□□□□□ -0.23
HEM12YDR047W YJL225CP40889 1758 aa13.61□□□□□ -0.23
HEM12YDR047W HSP104P31539 908 aaKnown RBP13.6□□□□□ -0.23
HEM12YDR047W TFA1P36100 482 aa13.6□□□□□ -0.23
HEM12YDR047W CTF4Q01454 927 aa13.6□□□□□ -0.23
HEM12YDR047W MAK21Q12176 1025 aaKnown RBP13.6□□□□□ -0.23
HEM12YDR047W XKS1P42826 600 aa13.59□□□□□ -0.23
HEM12YDR047W BUD27P43573 796 aaKnown RBP RIP-Chip data13.59□□□□□ -0.23not detected
HEM12YDR047W MAM1P40065 302 aa13.58□□□□□ -0.24
HEM12YDR047W AOS1Q06624 347 aa13.58□□□□□ -0.24
HEM12YDR047W RSF2P46974 1380 aa13.58□□□□□ -0.24
HEM12YDR047W REB1P21538 810 aa13.57□□□□□ -0.24
HEM12YDR047W YIL092WP40497 633 aa13.57□□□□□ -0.24
HEM12YDR047W GYP7P48365 746 aa13.57□□□□□ -0.24
HEM12YDR047W ZDS1P50111 915 aaKnown RBP13.57□□□□□ -0.24
HEM12YDR047W ENT1Q12518 454 aa13.56□□□□□ -0.24
HEM12YDR047W FKS3Q04952 1785 aa13.55□□□□□ -0.24
HEM12YDR047W DAL5P15365 543 aa13.55□□□□□ -0.24
HEM12YDR047W RCR1P38212 213 aa13.55□□□□□ -0.24
HEM12YDR047W URB1P34241 1764 aaKnown RBP13.55□□□□□ -0.24
HEM12YDR047W RRT14P40470 206 aa13.54□□□□□ -0.24
HEM12YDR047W YFR016CP43597 1233 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 5,963 RNA–protein pairs in 79.1 ms