RNA–Protein interactions for RNA: YDL070W

BDF2, Transcript of Protein involved in transcription initiation, yeastyeast

Gene BDF2, Length 1,917 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BDF2YDL070W KIP3P53086 805 aaKnown RBP8.19□□□□□ -1.1
BDF2YDL070W DJP1P40564 432 aa8.19□□□□□ -1.1
BDF2YDL070W YDL144CQ07589 356 aa8.17□□□□□ -1.1
BDF2YDL070W YSP2Q06681 1438 aa8.17□□□□□ -1.1
BDF2YDL070W SLN1P39928 1220 aaPredicted RBP8.17□□□□□ -1.1
BDF2YDL070W PCT1P13259 424 aa8.16□□□□□ -1.1
BDF2YDL070W YRB30P53107 440 aaPredicted RBP8.16□□□□□ -1.1
BDF2YDL070W SUI2P20459 304 aaKnown RBP8.14□□□□□ -1.11
BDF2YDL070W TY1B-NL2Q99337 1749 aaKnown RBP8.12□□□□□ -1.11
BDF2YDL070W RTC1Q08281 1341 aa8.11□□□□□ -1.11
BDF2YDL070W ESL2P36168 1195 aa8.11□□□□□ -1.11
BDF2YDL070W VPS24P36095 224 aaKnown RBP8.1□□□□□ -1.11
BDF2YDL070W AIM44Q99299 758 aa8.1□□□□□ -1.11
BDF2YDL070W RAV1P47104 1357 aa8.09□□□□□ -1.11
BDF2YDL070W RTG3P38165 486 aa8.09□□□□□ -1.11
BDF2YDL070W NAB6Q03735 1134 aaKnown RBP RIP-Chip data8.09□□□□□ -1.11not detected
BDF2YDL070W YMR196WQ04336 1088 aa8.09□□□□□ -1.11
BDF2YDL070W MSP1P28737 362 aa8.09□□□□□ -1.11
BDF2YDL070W CTR9P89105 1077 aa8.09□□□□□ -1.11
BDF2YDL070W QCR6P00127 147 aa8.08□□□□□ -1.12
BDF2YDL070W IML1P47170 1584 aa8.07□□□□□ -1.12
BDF2YDL070W SCT1P32784 759 aa8.07□□□□□ -1.12
BDF2YDL070W MPP10P47083 593 aaKnown RBP8.07□□□□□ -1.12
BDF2YDL070W NUP188P52593 1655 aaKnown RBP8.07□□□□□ -1.12
BDF2YDL070W TRK1P12685 1235 aa8.07□□□□□ -1.12
BDF2YDL070W ARL1P38116 183 aaKnown RBP8.07□□□□□ -1.12
BDF2YDL070W NOT3P06102 836 aaKnown RBP8.06□□□□□ -1.12
BDF2YDL070W RAD2P07276 1031 aa8.06□□□□□ -1.12
BDF2YDL070W IOC4Q04213 475 aa8.06□□□□□ -1.12
BDF2YDL070W KNS1P32350 737 aaPredicted RBP8.05□□□□□ -1.12
BDF2YDL070W EDE1P34216 1381 aa8.05□□□□□ -1.12
BDF2YDL070W HAP1P0CE41 1502 aa8.05□□□□□ -1.12
BDF2YDL070W THI12P42883 340 aa8.05□□□□□ -1.12
BDF2YDL070W THI5P43534 340 aa8.05□□□□□ -1.12
BDF2YDL070W THI11P47183 340 aa8.05□□□□□ -1.12
BDF2YDL070W THI13Q07748 340 aa8.05□□□□□ -1.12
BDF2YDL070W SPE2P21182 396 aa8.04□□□□□ -1.12
BDF2YDL070W PDR11P40550 1411 aa8.04□□□□□ -1.12
BDF2YDL070W IPL1P38991 367 aa8.03□□□□□ -1.12
BDF2YDL070W YPP1P46951 817 aa8.03□□□□□ -1.12
BDF2YDL070W YEF3P16521 1044 aaKnown RBP8.02□□□□□ -1.13
BDF2YDL070W NOP58Q12499 511 aaKnown RBP8.02□□□□□ -1.13
BDF2YDL070W DAL5P15365 543 aa8.01□□□□□ -1.13
BDF2YDL070W LSP1Q12230 341 aaKnown RBP8.01□□□□□ -1.13
BDF2YDL070W RLF2Q12495 606 aa8.01□□□□□ -1.13
BDF2YDL070W SAP155P43612 1002 aa8□□□□□ -1.13
BDF2YDL070W TEA1P47988 759 aa8□□□□□ -1.13
BDF2YDL070W POL32P47110 350 aa7.99□□□□□ -1.13
BDF2YDL070W VMR1P38735 1592 aa7.99□□□□□ -1.13
BDF2YDL070W NAP1P25293 417 aaKnown RBP7.99□□□□□ -1.13
BDF2YDL070W FKH1P40466 484 aa7.99□□□□□ -1.13
BDF2YDL070W YIL092WP40497 633 aa7.99□□□□□ -1.13
BDF2YDL070W CHZ1P40019 153 aaPredicted RBP7.97□□□□□ -1.13
BDF2YDL070W AVT3P36062 692 aa7.97□□□□□ -1.13
BDF2YDL070W BUD27P43573 796 aaKnown RBP RIP-Chip data7.97□□□□□ -1.13not detected
BDF2YDL070W YGR130CP53278 816 aa7.97□□□□□ -1.13
BDF2YDL070W RTR1P40084 226 aaPredicted RBP7.96□□□□□ -1.13
BDF2YDL070W ITC1P53125 1264 aa7.96□□□□□ -1.13
BDF2YDL070W TYS1P36421 394 aaKnown RBP7.95□□□□□ -1.14
BDF2YDL070W RRP46P53256 223 aaPredicted RBP7.95□□□□□ -1.14
BDF2YDL070W TPD3P31383 635 aa7.95□□□□□ -1.14
BDF2YDL070W PUF6Q04373 656 aaKnown RBP7.93□□□□□ -1.14
BDF2YDL070W YAH1Q12184 172 aaKnown RBP7.93□□□□□ -1.14
BDF2YDL070W SNF2P22082 1703 aa7.92□□□□□ -1.14
BDF2YDL070W NUP192P47054 1683 aa7.92□□□□□ -1.14
BDF2YDL070W TAF8Q03750 510 aa7.91□□□□□ -1.14
BDF2YDL070W LCD1Q04377 747 aa7.91□□□□□ -1.14
BDF2YDL070W SRS2P12954 1174 aa7.91□□□□□ -1.14
BDF2YDL070W GLN1P32288 370 aaKnown RBP7.91□□□□□ -1.14
BDF2YDL070W RSC1P53236 928 aa7.91□□□□□ -1.14
BDF2YDL070W COG8Q04632 607 aa7.91□□□□□ -1.14
BDF2YDL070W THI22Q06490 572 aa7.91□□□□□ -1.14
BDF2YDL070W KRE5P22023 1365 aa7.9□□□□□ -1.14
BDF2YDL070W CSE4P36012 229 aa7.9□□□□□ -1.14
BDF2YDL070W PRD1P25375 712 aa7.9□□□□□ -1.15
BDF2YDL070W HAP5Q02516 242 aa7.89□□□□□ -1.15
BDF2YDL070W MDG1P53885 366 aa7.88□□□□□ -1.15
BDF2YDL070W HEF3P53978 1044 aaKnown RBP7.88□□□□□ -1.15
BDF2YDL070W SPT21P35209 758 aa7.88□□□□□ -1.15
BDF2YDL070W RAD26P40352 1085 aa7.88□□□□□ -1.15
BDF2YDL070W TPM2P40414 161 aa7.88□□□□□ -1.15
BDF2YDL070W PIL1P53252 339 aaKnown RBP7.87□□□□□ -1.15
BDF2YDL070W MAK21Q12176 1025 aaKnown RBP7.87□□□□□ -1.15
BDF2YDL070W MLP1Q02455 1875 aaKnown RBP7.87□□□□□ -1.15
BDF2YDL070W ESC2Q06340 456 aa7.86□□□□□ -1.15
BDF2YDL070W RKM3P38222 552 aa7.86□□□□□ -1.15
BDF2YDL070W YIL055CP40523 627 aaKnown RBP7.86□□□□□ -1.15
BDF2YDL070W MCM2P29469 868 aa7.85□□□□□ -1.15
BDF2YDL070W RTT109Q07794 436 aa7.85□□□□□ -1.15
BDF2YDL070W YML133CQ03099 1374 aa7.84□□□□□ -1.15
BDF2YDL070W YLL067CQ07888 1374 aa7.84□□□□□ -1.15
BDF2YDL070W YLL066CQ99208 1374 aa7.84□□□□□ -1.15
BDF2YDL070W KAR2P16474 682 aaKnown RBP7.84□□□□□ -1.15
BDF2YDL070W RRT14P40470 206 aa7.84□□□□□ -1.16
BDF2YDL070W APP1P53933 587 aa7.84□□□□□ -1.16
BDF2YDL070W NUP145P49687 1317 aa7.83□□□□□ -1.16
BDF2YDL070W RPN1P38764 993 aaKnown RBP7.83□□□□□ -1.16
BDF2YDL070W YGL081WP53156 320 aa7.83□□□□□ -1.16
BDF2YDL070W PAP2P53632 584 aaKnown RBP7.83□□□□□ -1.16
BDF2YDL070W DLD1P32891 587 aa7.82□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms