RNA–Protein interactions for RNA: YCR004C

YCP4, Transcript of Protein of unknown function, yeastyeast

Gene YCP4, Length 744 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCP4YCR004C ISW2Q08773 1120 aa12.01□□□□□ -0.49
YCP4YCR004C HAA1Q12753 694 aaKnown RBP12.01□□□□□ -0.49
YCP4YCR004C PRP45P28004 379 aaPredicted RBP11.99□□□□□ -0.49
YCP4YCR004C LEU3P08638 886 aa11.98□□□□□ -0.49
YCP4YCR004C TAF5P38129 798 aa11.98□□□□□ -0.49
YCP4YCR004C UBP1P25037 809 aa11.97□□□□□ -0.49
YCP4YCR004C NAP1P25293 417 aaKnown RBP11.96□□□□□ -0.49
YCP4YCR004C BFR2Q06631 534 aaKnown RBP11.96□□□□□ -0.49
YCP4YCR004C RTC1Q08281 1341 aa11.94□□□□□ -0.5
YCP4YCR004C YCK3P39962 524 aa11.9□□□□□ -0.5
YCP4YCR004C CPS1P27614 576 aa11.87□□□□□ -0.51
YCP4YCR004C PRP5P21372 849 aaPredicted RBP11.86□□□□□ -0.51
YCP4YCR004C NOP7P53261 605 aaKnown RBP11.86□□□□□ -0.51
YCP4YCR004C YBL086CP38177 466 aa11.85□□□□□ -0.51
YCP4YCR004C RPN11P43588 306 aaKnown RBP11.85□□□□□ -0.51
YCP4YCR004C TY4B-HP0C2J7 1802 aa11.85□□□□□ -0.51
YCP4YCR004C TY4B-JP47024 1803 aa11.85□□□□□ -0.51
YCP4YCR004C RCM1P53972 490 aa11.84□□□□□ -0.51
YCP4YCR004C RPG1P38249 964 aaKnown RBP11.83□□□□□ -0.52
YCP4YCR004C TAF8Q03750 510 aa11.83□□□□□ -0.52
YCP4YCR004C UGA2P38067 497 aa11.82□□□□□ -0.52
YCP4YCR004C URB1P34241 1764 aaKnown RBP11.82□□□□□ -0.52
YCP4YCR004C YJL181WP46987 611 aa11.79□□□□□ -0.52
YCP4YCR004C EDE1P34216 1381 aa11.79□□□□□ -0.52
YCP4YCR004C GTT3P39996 337 aa11.78□□□□□ -0.52
YCP4YCR004C DOT5P40553 215 aa11.78□□□□□ -0.52
YCP4YCR004C IES2P40154 320 aa11.77□□□□□ -0.53
YCP4YCR004C PSK1P31374 1356 aa11.77□□□□□ -0.53
YCP4YCR004C SSA1P10591 642 aaKnown RBP11.76□□□□□ -0.53
YCP4YCR004C ESL2P36168 1195 aa11.76□□□□□ -0.53
YCP4YCR004C MSB3P48566 633 aaPredicted RBP11.76□□□□□ -0.53
YCP4YCR004C PPH3P32345 308 aa11.75□□□□□ -0.53
YCP4YCR004C ALD2P47771 506 aa11.74□□□□□ -0.53
YCP4YCR004C ROM2P51862 1356 aaKnown RBP11.74□□□□□ -0.53
YCP4YCR004C FKS3Q04952 1785 aa11.73□□□□□ -0.53
YCP4YCR004C TCB1Q12466 1186 aa11.72□□□□□ -0.53
YCP4YCR004C SSA2P10592 639 aaKnown RBP11.71□□□□□ -0.53
YCP4YCR004C LYS4P49367 693 aaPredicted RBP11.71□□□□□ -0.53
YCP4YCR004C FOX2Q02207 900 aaKnown RBP11.71□□□□□ -0.53
YCP4YCR004C PRP40P33203 583 aaKnown RBP11.7□□□□□ -0.54
YCP4YCR004C NPR2P39923 615 aa11.7□□□□□ -0.54
YCP4YCR004C LAM6Q08001 693 aa11.69□□□□□ -0.54
YCP4YCR004C ADE6P38972 1358 aaKnown RBP11.68□□□□□ -0.54
YCP4YCR004C RSF2P46974 1380 aa11.68□□□□□ -0.54
YCP4YCR004C YEF3P16521 1044 aaKnown RBP11.68□□□□□ -0.54
YCP4YCR004C ENP1P38333 483 aaKnown RBP11.65□□□□□ -0.54
YCP4YCR004C SLM3Q12093 417 aa11.63□□□□□ -0.55
YCP4YCR004C YRF1-3P0CX14 1859 aa11.61□□□□□ -0.55
YCP4YCR004C YRF1-7P0CX15 1859 aa11.61□□□□□ -0.55
YCP4YCR004C YRF1-6P53819 1859 aa11.61□□□□□ -0.55
YCP4YCR004C TSR3Q12094 313 aaKnown RBP11.61□□□□□ -0.55
YCP4YCR004C CSE4P36012 229 aa11.6□□□□□ -0.55
YCP4YCR004C YKL133CP36066 463 aa11.6□□□□□ -0.55
YCP4YCR004C COBP00163 385 aa11.59□□□□□ -0.55
YCP4YCR004C CTH1P47976 325 aa11.58□□□□□ -0.56
YCP4YCR004C SPE2P21182 396 aa11.56□□□□□ -0.56
YCP4YCR004C LEU2P04173 364 aaPredicted RBP11.55□□□□□ -0.56
YCP4YCR004C RPS24AP0CX31 135 aaKnown RBP11.55□□□□□ -0.56
YCP4YCR004C RPS24BP0CX32 135 aaKnown RBP11.55□□□□□ -0.56
YCP4YCR004C MTR4P47047 1073 aaKnown RBP11.55□□□□□ -0.56
YCP4YCR004C YRF1-4O13559 1382 aa11.54□□□□□ -0.56
YCP4YCR004C XKS1P42826 600 aa11.54□□□□□ -0.56
YCP4YCR004C YKR075CP36155 307 aa11.53□□□□□ -0.56
YCP4YCR004C PRP43P53131 767 aaKnown RBP11.53□□□□□ -0.56
YCP4YCR004C KIP3P53086 805 aaKnown RBP11.52□□□□□ -0.57
YCP4YCR004C RRD1P40454 393 aaKnown RBP11.51□□□□□ -0.57
YCP4YCR004C SPT7P35177 1332 aa11.5□□□□□ -0.57
YCP4YCR004C CHZ1P40019 153 aaPredicted RBP11.49□□□□□ -0.57
YCP4YCR004C APC1P53886 1748 aa11.49□□□□□ -0.57
YCP4YCR004C ALD3P54114 506 aa11.48□□□□□ -0.57
YCP4YCR004C BDF1P35817 686 aa11.47□□□□□ -0.57
YCP4YCR004C YIL177CP40434 1758 aa11.46□□□□□ -0.57
YCP4YCR004C YJL225CP40889 1758 aa11.46□□□□□ -0.57
YCP4YCR004C MEC3Q02574 474 aa11.44□□□□□ -0.58
YCP4YCR004C FRK1Q03002 865 aaPredicted RBP11.43□□□□□ -0.58
YCP4YCR004C SNF2P22082 1703 aa11.41□□□□□ -0.58
YCP4YCR004C MSB4Q12317 492 aa11.39□□□□□ -0.59
YCP4YCR004C DPS1P04802 557 aaKnown RBP11.37□□□□□ -0.59
YCP4YCR004C SAP155P43612 1002 aa11.37□□□□□ -0.59
YCP4YCR004C YLR419WQ06698 1435 aaKnown RBP11.36□□□□□ -0.59
YCP4YCR004C SCT1P32784 759 aa11.36□□□□□ -0.59
YCP4YCR004C EAF6P47128 113 aa11.36□□□□□ -0.59
YCP4YCR004C ORC1P54784 914 aaPredicted RBP11.36□□□□□ -0.59
YCP4YCR004C BUG1Q12191 341 aa11.36□□□□□ -0.59
YCP4YCR004C RIM15P43565 1770 aa11.36□□□□□ -0.59
YCP4YCR004C RCR1P38212 213 aa11.35□□□□□ -0.59
YCP4YCR004C GAS4Q08271 471 aa11.35□□□□□ -0.59
YCP4YCR004C ADE16P54113 591 aaKnown RBP11.34□□□□□ -0.59
YCP4YCR004C ATG13Q06628 738 aa11.34□□□□□ -0.59
YCP4YCR004C SIR4P11978 1358 aa11.33□□□□□ -0.6
YCP4YCR004C RTF1P53064 558 aa11.31□□□□□ -0.6
YCP4YCR004C MSN5P52918 1224 aa11.3□□□□□ -0.6
YCP4YCR004C HPC2Q01448 625 aa11.3□□□□□ -0.6
YCP4YCR004C DIP2Q12220 943 aaPredicted RBP11.3□□□□□ -0.6
YCP4YCR004C RPO41P13433 1351 aaKnown RBP11.29□□□□□ -0.6
YCP4YCR004C UTP22P53254 1237 aaPredicted RBP11.29□□□□□ -0.6
YCP4YCR004C YML133CQ03099 1374 aa11.28□□□□□ -0.6
YCP4YCR004C YLL067CQ07888 1374 aa11.28□□□□□ -0.6
YCP4YCR004C YLL066CQ99208 1374 aa11.28□□□□□ -0.6
YCP4YCR004C RAD4P14736 754 aa11.28□□□□□ -0.6
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms