RNA–Protein interactions for RNA: YBR080C

SEC18, Transcript of AAA ATPase and SNARE disassembly chaperone, yeastyeast

Gene SEC18, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC18YBR080C YBL036CP38197 257 aa7.35□□□□□ -1.23
SEC18YBR080C BUD6P41697 788 aa7.35□□□□□ -1.23
SEC18YBR080C MDJ2P42834 146 aa7.35□□□□□ -1.23
SEC18YBR080C RPA135P22138 1203 aaKnown RBP7.35□□□□□ -1.23
SEC18YBR080C SSB1P11484 613 aaKnown RBP7.34□□□□□ -1.24
SEC18YBR080C GAL11P19659 1081 aa7.34□□□□□ -1.24
SEC18YBR080C TOA1P32773 286 aa7.34□□□□□ -1.24
SEC18YBR080C YHL050CP38721 697 aa7.34□□□□□ -1.24
SEC18YBR080C YHR219WP38900 624 aa7.34□□□□□ -1.24
SEC18YBR080C SSB2P40150 613 aaKnown RBP7.34□□□□□ -1.24
SEC18YBR080C YEL077CQ3E7X8 1277 aa7.34□□□□□ -1.24
SEC18YBR080C PSE1P32337 1089 aaKnown RBP7.33□□□□□ -1.24
SEC18YBR080C FPR3P38911 411 aaKnown RBP7.33□□□□□ -1.24
SEC18YBR080C KIP3P53086 805 aaKnown RBP7.33□□□□□ -1.24
SEC18YBR080C ALD3P54114 506 aa7.33□□□□□ -1.24
SEC18YBR080C OYE2Q03558 400 aaKnown RBP7.33□□□□□ -1.24
SEC18YBR080C EPS1P40557 701 aa7.32□□□□□ -1.24
SEC18YBR080C SVL3Q03088 825 aaKnown RBP7.32□□□□□ -1.24
SEC18YBR080C ENO2P00925 437 aaKnown RBP7.32□□□□□ -1.24
SEC18YBR080C CWC22P53333 577 aaKnown RBP7.32□□□□□ -1.24
SEC18YBR080C PPG1P32838 368 aa7.31□□□□□ -1.24
SEC18YBR080C MNN4P36044 1178 aa7.31□□□□□ -1.24
SEC18YBR080C YJR107WP47145 328 aa7.31□□□□□ -1.24
SEC18YBR080C YDL121CQ07541 149 aa7.31□□□□□ -1.24
SEC18YBR080C YDJ1P25491 409 aaKnown RBP7.3□□□□□ -1.24
SEC18YBR080C PPX1P38698 397 aa7.3□□□□□ -1.24
SEC18YBR080C RIM21P48565 533 aa7.3□□□□□ -1.24
SEC18YBR080C PEP12P32854 288 aa7.3□□□□□ -1.24
SEC18YBR080C AIM21P40563 679 aa7.3□□□□□ -1.24
SEC18YBR080C RPN4Q03465 531 aa7.3□□□□□ -1.24
SEC18YBR080C JIP5Q06214 492 aaPredicted RBP7.3□□□□□ -1.24
SEC18YBR080C BDF1P35817 686 aa7.29□□□□□ -1.24
SEC18YBR080C RRP14P36080 434 aaKnown RBP7.29□□□□□ -1.24
SEC18YBR080C VAC8P39968 578 aa7.29□□□□□ -1.24
SEC18YBR080C TFG1P41895 735 aaPredicted RBP7.29□□□□□ -1.24
SEC18YBR080C SSD1P24276 1250 aaKnown RBP RIP-Chip data7.29□□□□□ -1.24not detected
SEC18YBR080C STS1P38637 319 aa7.29□□□□□ -1.24
SEC18YBR080C RPS0BP46654 252 aaKnown RBP7.29□□□□□ -1.24
SEC18YBR080C VMA4P22203 233 aaKnown RBP7.28□□□□□ -1.24
SEC18YBR080C CDC27P38042 758 aa7.28□□□□□ -1.24
SEC18YBR080C BOI2P39969 1040 aa7.28□□□□□ -1.24
SEC18YBR080C MIF2P35201 549 aa7.27□□□□□ -1.24
SEC18YBR080C TY4A-JP47023 414 aa7.27□□□□□ -1.24
SEC18YBR080C YLR326WQ06170 240 aaKnown RBP7.27□□□□□ -1.24
SEC18YBR080C RDS2P19541 446 aaKnown RBP7.27□□□□□ -1.25
SEC18YBR080C CSE4P36012 229 aa7.27□□□□□ -1.25
SEC18YBR080C MET1P36150 593 aa7.27□□□□□ -1.25
SEC18YBR080C VHR2P40041 505 aa7.27□□□□□ -1.25
SEC18YBR080C MNL2Q12205 849 aa7.27□□□□□ -1.25
SEC18YBR080C MPE1P35728 441 aaKnown RBP7.26□□□□□ -1.25
SEC18YBR080C SIS2P36024 562 aa7.26□□□□□ -1.25
SEC18YBR080C DNM1P54861 757 aa7.26□□□□□ -1.25
SEC18YBR080C RAD59Q12223 238 aa7.26□□□□□ -1.25
SEC18YBR080C RAD2P07276 1031 aa7.25□□□□□ -1.25
SEC18YBR080C CWC15Q03772 175 aaKnown RBP7.25□□□□□ -1.25
SEC18YBR080C SRP40P32583 406 aaPredicted RBP7.25□□□□□ -1.25
SEC18YBR080C TAT2P38967 592 aa7.25□□□□□ -1.25
SEC18YBR080C SSF2Q12153 453 aaPredicted RBP7.25□□□□□ -1.25
SEC18YBR080C MET4P32389 672 aa7.24□□□□□ -1.25
SEC18YBR080C YJR142WP47173 342 aa7.24□□□□□ -1.25
SEC18YBR080C GIR2Q03768 265 aaPredicted RBP7.24□□□□□ -1.25
SEC18YBR080C NSE3Q05541 303 aa7.24□□□□□ -1.25
SEC18YBR080C PTC3P34221 468 aaKnown RBP7.24□□□□□ -1.25
SEC18YBR080C HIF1Q12373 385 aa7.24□□□□□ -1.25
SEC18YBR080C YKL091CP33324 310 aaKnown RBP7.23□□□□□ -1.25
SEC18YBR080C FYV10P40492 516 aa7.23□□□□□ -1.25
SEC18YBR080C ALD6P54115 500 aaKnown RBP7.23□□□□□ -1.25
SEC18YBR080C RLP24Q07915 199 aaKnown RBP7.23□□□□□ -1.25
SEC18YBR080C FRT1Q99332 602 aa7.22□□□□□ -1.25
SEC18YBR080C UBP12P39538 1254 aa7.22□□□□□ -1.25
SEC18YBR080C TEA1P47988 759 aa7.22□□□□□ -1.25
SEC18YBR080C NIS1P53939 407 aa7.22□□□□□ -1.25
SEC18YBR080C UBP3Q01477 912 aaKnown RBP RIP-Chip data7.22□□□□□ -1.25not detected
SEC18YBR080C PBP2P38151 413 aaKnown RBP RIP-Chip data7.21□□□□□ -1.25not detected
SEC18YBR080C ORC6P38826 435 aa7.21□□□□□ -1.25
SEC18YBR080C ECM23Q02710 187 aa7.21□□□□□ -1.25
SEC18YBR080C VPS16Q03308 798 aa7.21□□□□□ -1.26
SEC18YBR080C FUI1P38196 639 aa7.2□□□□□ -1.26
SEC18YBR080C GRS1P38088 690 aaKnown RBP7.2□□□□□ -1.26
SEC18YBR080C HST2P53686 357 aa7.2□□□□□ -1.26
SEC18YBR080C ECM16Q04217 1267 aaKnown RBP7.2□□□□□ -1.26
SEC18YBR080C POB3Q04636 552 aaKnown RBP7.2□□□□□ -1.26
SEC18YBR080C YJU3P28321 313 aa7.19□□□□□ -1.26
SEC18YBR080C NFU1P32860 256 aa7.19□□□□□ -1.26
SEC18YBR080C PCS60P38137 543 aaKnown RBP RIP-Chip data7.19□□□□□ -1.26not detected
SEC18YBR080C BOL3P39724 118 aa7.19□□□□□ -1.26
SEC18YBR080C POL5P39985 1022 aaKnown RBP7.19□□□□□ -1.26
SEC18YBR080C SCJ1P25303 377 aa7.18□□□□□ -1.26
SEC18YBR080C ERP2P39704 215 aa7.18□□□□□ -1.26
SEC18YBR080C RTF1P53064 558 aa7.18□□□□□ -1.26
SEC18YBR080C KAR5Q04746 504 aa7.18□□□□□ -1.26
SEC18YBR080C PPM2Q08282 695 aa7.18□□□□□ -1.26
SEC18YBR080C PIN2Q12057 282 aa7.18□□□□□ -1.26
SEC18YBR080C SEC6P32844 805 aa7.18□□□□□ -1.26
SEC18YBR080C RSC30P38781 883 aa7.18□□□□□ -1.26
SEC18YBR080C MTO1P53070 669 aa7.18□□□□□ -1.26
SEC18YBR080C ATG1P53104 897 aa7.18□□□□□ -1.26
SEC18YBR080C BDF2Q07442 638 aa7.18□□□□□ -1.26
SEC18YBR080C GLO3P38682 493 aaKnown RBP7.17□□□□□ -1.26
SEC18YBR080C FPK1P53739 893 aa7.17□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms