RNA–Protein interactions for RNA: YAL002W

VPS8, Transcript of Membrane-binding component of the CORVET complex, yeast

Gene VPS8, Length 3,825 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS8	YAL002W	GRS1	P38088	690 aa	Known RBP	3.07	□□□□□ -1.92
VPS8	YAL002W	NOB1	Q08444	459 aa	Known RBP	3.07	□□□□□ -1.92
VPS8	YAL002W	RRN6	P32786	894 aa		3.07	□□□□□ -1.92
VPS8	YAL002W	KOG1	P38873	1557 aa		3.07	□□□□□ -1.92
VPS8	YAL002W	MVP1	P40959	511 aa	Known RBP	3.07	□□□□□ -1.92
VPS8	YAL002W	KAR5	Q04746	504 aa		3.06	□□□□□ -1.92
VPS8	YAL002W	JIP5	Q06214	492 aa	Predicted RBP	3.06	□□□□□ -1.92
VPS8	YAL002W	YBL113C	Q7M4S9	792 aa		3.06	□□□□□ -1.92
VPS8	YAL002W	ILV3	P39522	585 aa	Known RBP	3.05	□□□□□ -1.92
VPS8	YAL002W	CSC1	Q06538	782 aa		3.05	□□□□□ -1.92
VPS8	YAL002W	KEX2	P13134	814 aa		3.05	□□□□□ -1.92
VPS8	YAL002W	TGL4	P36165	910 aa		3.05	□□□□□ -1.92
VPS8	YAL002W	YEL023C	P39992	682 aa		3.05	□□□□□ -1.92
VPS8	YAL002W	HST2	P53686	357 aa		3.05	□□□□□ -1.92
VPS8	YAL002W	PUP1	P25043	261 aa		3.04	□□□□□ -1.92
VPS8	YAL002W	SOL3	P38858	249 aa		3.04	□□□□□ -1.92
VPS8	YAL002W	NOP8	Q08287	484 aa	Predicted RBP	3.04	□□□□□ -1.92
VPS8	YAL002W	TRM1	P15565	570 aa	Known RBP	3.04	□□□□□ -1.92
VPS8	YAL002W	GCD11	P32481	527 aa	Known RBP	3.04	□□□□□ -1.92
VPS8	YAL002W	SSF1	P38789	453 aa	Predicted RBP	3.04	□□□□□ -1.92
VPS8	YAL002W	SLI15	P38283	698 aa		3.04	□□□□□ -1.92
VPS8	YAL002W	IPL1	P38991	367 aa		3.03	□□□□□ -1.92
VPS8	YAL002W	MID1	P41821	548 aa		3.03	□□□□□ -1.92
VPS8	YAL002W	DAN4	P47179	1161 aa		3.02	□□□□□ -1.93
VPS8	YAL002W	CSE4	P36012	229 aa		3.02	□□□□□ -1.93
VPS8	YAL002W	EMP47	P43555	445 aa		3.02	□□□□□ -1.93
VPS8	YAL002W	LAM6	Q08001	693 aa		3.02	□□□□□ -1.93
VPS8	YAL002W	YDL206W	Q12424	762 aa		3.02	□□□□□ -1.93
VPS8	YAL002W	PML39	Q03760	334 aa		3.01	□□□□□ -1.93
VPS8	YAL002W	TFG1	P41895	735 aa	Predicted RBP	3.01	□□□□□ -1.93
VPS8	YAL002W	YPP1	P46951	817 aa		3.01	□□□□□ -1.93
VPS8	YAL002W	SAM3	Q08986	587 aa		3.01	□□□□□ -1.93
VPS8	YAL002W	MCM16	Q12262	181 aa		3.01	□□□□□ -1.93
VPS8	YAL002W	DNA2	P38859	1522 aa		3.01	□□□□□ -1.93
VPS8	YAL002W	HEM3	P28789	327 aa		3.01	□□□□□ -1.93
VPS8	YAL002W	PEP7	P32609	515 aa		3.01	□□□□□ -1.93
VPS8	YAL002W	POL32	P47110	350 aa		3.01	□□□□□ -1.93
VPS8	YAL002W	TFB4	Q12004	338 aa		3.01	□□□□□ -1.93
VPS8	YAL002W	PUN1	Q06991	263 aa		3	□□□□□ -1.93
VPS8	YAL002W	NUD1	P32336	851 aa		3	□□□□□ -1.93
VPS8	YAL002W	STM1	P39015	273 aa	Known RBP	3	□□□□□ -1.93
VPS8	YAL002W	YEL077C	Q3E7X8	1277 aa		3	□□□□□ -1.93
VPS8	YAL002W	MPH3	P0CE00	602 aa		3	□□□□□ -1.93
VPS8	YAL002W	GLO3	P38682	493 aa	Known RBP	3	□□□□□ -1.93
VPS8	YAL002W	ERP5	P38819	212 aa		3	□□□□□ -1.93
VPS8	YAL002W	OYE2	Q03558	400 aa	Known RBP	3	□□□□□ -1.93
VPS8	YAL002W	ERF2	Q06551	359 aa		3	□□□□□ -1.93
VPS8	YAL002W	SIS2	P36024	562 aa		2.99	□□□□□ -1.93
VPS8	YAL002W	YNL115C	P53925	644 aa		2.99	□□□□□ -1.93
VPS8	YAL002W	SWR1	Q05471	1514 aa		2.99	□□□□□ -1.93
VPS8	YAL002W	MAK16	P10962	306 aa	Predicted RBP	2.99	□□□□□ -1.93
VPS8	YAL002W	TGL3	P40308	642 aa		2.99	□□□□□ -1.93
VPS8	YAL002W	AI4	P03878	556 aa		2.99	□□□□□ -1.93
VPS8	YAL002W	SUP45	P12385	437 aa	Known RBP	2.99	□□□□□ -1.93
VPS8	YAL002W	PDI1	P17967	522 aa	Known RBP	2.99	□□□□□ -1.93
VPS8	YAL002W	NAP1	P25293	417 aa	Known RBP	2.99	□□□□□ -1.93
VPS8	YAL002W	SPT5	P27692	1063 aa	Known RBP	2.99	□□□□□ -1.93
VPS8	YAL002W	SOH1	P38633	127 aa		2.99	□□□□□ -1.93
VPS8	YAL002W	YHL050C	P38721	697 aa		2.99	□□□□□ -1.93
VPS8	YAL002W	YHR219W	P38900	624 aa		2.99	□□□□□ -1.93
VPS8	YAL002W	THO2	P53552	1597 aa	Known RBP	2.98	□□□□□ -1.93
VPS8	YAL002W	ULI1	P43604	169 aa		2.98	□□□□□ -1.93
VPS8	YAL002W	RIM21	P48565	533 aa		2.98	□□□□□ -1.93
VPS8	YAL002W	PUS6	P53294	404 aa		2.98	□□□□□ -1.93
VPS8	YAL002W	FUR4	P05316	633 aa	Known RBP	2.98	□□□□□ -1.93
VPS8	YAL002W	FOX2	Q02207	900 aa	Known RBP	2.98	□□□□□ -1.93
VPS8	YAL002W	DPL1	Q05567	589 aa		2.98	□□□□□ -1.93
VPS8	YAL002W	TRP5	P00931	707 aa	Known RBP	2.98	□□□□□ -1.93
VPS8	YAL002W	SEC20	P28791	383 aa		2.98	□□□□□ -1.93
VPS8	YAL002W	GAL2	P13181	574 aa		2.97	□□□□□ -1.93
VPS8	YAL002W	MPC54	Q08550	464 aa		2.97	□□□□□ -1.93
VPS8	YAL002W	YBL029C-A	Q3E756	94 aa		2.97	□□□□□ -1.93
VPS8	YAL002W	MIP1	P15801	1254 aa		2.97	□□□□□ -1.93
VPS8	YAL002W	TEC1	P18412	486 aa		2.97	□□□□□ -1.93
VPS8	YAL002W	CWC24	P53769	259 aa		2.97	□□□□□ -1.93
VPS8	YAL002W	PDR1	P12383	1068 aa		2.96	□□□□□ -1.94
VPS8	YAL002W	SPP1	Q03012	353 aa		2.96	□□□□□ -1.94
VPS8	YAL002W	IOC4	Q04213	475 aa		2.96	□□□□□ -1.94
VPS8	YAL002W	SVF1	Q05515	481 aa		2.96	□□□□□ -1.94
VPS8	YAL002W	ASF1	P32447	279 aa		2.96	□□□□□ -1.94
VPS8	YAL002W	MGE1	P38523	228 aa		2.96	□□□□□ -1.94
VPS8	YAL002W	ATG3	P40344	310 aa		2.96	□□□□□ -1.94
VPS8	YAL002W	MAD1	P40957	749 aa		2.96	□□□□□ -1.94
VPS8	YAL002W	NMA111	P53920	997 aa		2.96	□□□□□ -1.94
VPS8	YAL002W	STE20	Q03497	939 aa	Known RBP	2.96	□□□□□ -1.94
VPS8	YAL002W	PPG1	P32838	368 aa		2.96	□□□□□ -1.94
VPS8	YAL002W	MRX10	Q05648	414 aa		2.95	□□□□□ -1.94
VPS8	YAL002W	PNP1	Q05788	311 aa		2.95	□□□□□ -1.94
VPS8	YAL002W	GUT2	P32191	649 aa		2.95	□□□□□ -1.94
VPS8	YAL002W	ALR1	Q08269	859 aa		2.95	□□□□□ -1.94
VPS8	YAL002W	VAN1	P23642	535 aa		2.95	□□□□□ -1.94
VPS8	YAL002W	PTC4	P38089	393 aa		2.95	□□□□□ -1.94
VPS8	YAL002W	RRN7	P40992	514 aa		2.95	□□□□□ -1.94
VPS8	YAL002W	SSK2	P53599	1579 aa		2.95	□□□□□ -1.94
VPS8	YAL002W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	2.94	□□□□□ -1.94	not detected
VPS8	YAL002W	EAP1	P36041	632 aa	Known RBP	2.94	□□□□□ -1.94
VPS8	YAL002W	ALD2	P47771	506 aa		2.94	□□□□□ -1.94
VPS8	YAL002W	ELP4	Q02884	456 aa	Known RBP	2.94	□□□□□ -1.94
VPS8	YAL002W	ISU2	Q12056	156 aa		2.94	□□□□□ -1.94
VPS8	YAL002W	MSB4	Q12317	492 aa		2.94	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 12 ms