RNA–Protein interactions for RNA: ENST00000593093.5

CIRBP-242, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,528 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-242ENST00000593093 CCDC7Q96M83 1385 aa19.08■□□□□ 0.64
CIRBP-242ENST00000593093 SLC4A3P48751 1232 aa19.08■□□□□ 0.64
CIRBP-242ENST00000593093 EXOC6Q8TAG9 804 aa19.08■□□□□ 0.64
CIRBP-242ENST00000593093 ABCA10Q8WWZ4 1543 aa19.07■□□□□ 0.64
CIRBP-242ENST00000593093 CNTLNQ9NXG0 1405 aa19.06■□□□□ 0.64
CIRBP-242ENST00000593093 PKNOX2Q96KN3 472 aa19.06■□□□□ 0.64
CIRBP-242ENST00000593093 ZNF777Q9ULD5 760 aaPredicted RBP19.06■□□□□ 0.64
CIRBP-242ENST00000593093 PRDM2Q13029 1718 aa19.05■□□□□ 0.64
CIRBP-242ENST00000593093 FMN1Q68DA7 1419 aa19.04■□□□□ 0.64
CIRBP-242ENST00000593093 ERCC6Q03468 1493 aa19.03■□□□□ 0.64
CIRBP-242ENST00000593093 PLIN1O60240 522 aa19.02■□□□□ 0.64
CIRBP-242ENST00000593093 LAMC3Q9Y6N6 1575 aa19.01■□□□□ 0.63
CIRBP-242ENST00000593093 PLEKHG5O94827 1062 aa19■□□□□ 0.63
CIRBP-242ENST00000593093 PDE4AP27815 886 aa18.99■□□□□ 0.63
CIRBP-242ENST00000593093 CHMP7Q8WUX9 453 aaPredicted RBP18.99■□□□□ 0.63
CIRBP-242ENST00000593093 NAIPQ13075 1403 aa18.99■□□□□ 0.63
CIRBP-242ENST00000593093 PCF11O94913 1555 aaKnown RBP18.98■□□□□ 0.63
CIRBP-242ENST00000593093 KIF21AQ7Z4S6 1674 aa18.97■□□□□ 0.63
CIRBP-242ENST00000593093 ARXQ96QS3 562 aa18.96■□□□□ 0.63
CIRBP-242ENST00000593093 BRPF3Q9ULD4 1205 aa18.96■□□□□ 0.63
CIRBP-242ENST00000593093 HFM1A2PYH4 1435 aa18.96■□□□□ 0.63
CIRBP-242ENST00000593093 RCAN3Q9UKA8 241 aa18.93■□□□□ 0.62
CIRBP-242ENST00000593093 ZNF608Q9ULD9 1512 aaPredicted RBP18.91■□□□□ 0.62
CIRBP-242ENST00000593093 CARD11Q9BXL7 1154 aa18.91■□□□□ 0.62
CIRBP-242ENST00000593093 ZNF644Q9H582 1327 aaPredicted RBP18.9■□□□□ 0.62
CIRBP-242ENST00000593093 RRP1P56182 461 aaKnown RBP18.89■□□□□ 0.61
CIRBP-242ENST00000593093 CDCA7LQ96GN5 454 aa18.89■□□□□ 0.61
CIRBP-242ENST00000593093 CASKIN1Q8WXD9 1431 aa18.88■□□□□ 0.61
CIRBP-242ENST00000593093 NCOA2Q15596 1464 aa18.88■□□□□ 0.61
CIRBP-242ENST00000593093 TCERG1O14776 1098 aaKnown RBP18.87■□□□□ 0.61
CIRBP-242ENST00000593093 PPM1GO15355 546 aaPredicted RBP18.87■□□□□ 0.61
CIRBP-242ENST00000593093 RGS3P49796 1198 aa18.87■□□□□ 0.61
CIRBP-242ENST00000593093 CC2D1BQ5T0F9 858 aaKnown RBP18.87■□□□□ 0.61
CIRBP-242ENST00000593093 MYOM3Q5VTT5 1437 aa18.86■□□□□ 0.61
CIRBP-242ENST00000593093 MAP3K1Q13233 1512 aa18.86■□□□□ 0.61
CIRBP-242ENST00000593093 PNISRQ8TF01 805 aaKnown RBP18.86■□□□□ 0.61
CIRBP-242ENST00000593093 SMG6Q86US8 1419 aaKnown RBP18.84■□□□□ 0.61
CIRBP-242ENST00000593093 NCOA1Q15788 1441 aa18.83■□□□□ 0.61
CIRBP-242ENST00000593093 RGL3Q3MIN7 710 aa18.83■□□□□ 0.6
CIRBP-242ENST00000593093 PKD2Q13563 968 aa18.82■□□□□ 0.6
CIRBP-242ENST00000593093 MRC2Q9UBG0 1479 aa18.82■□□□□ 0.6
CIRBP-242ENST00000593093 PODXL2Q9NZ53 605 aa18.82■□□□□ 0.6
CIRBP-242ENST00000593093 ST20-MTHFSA0A0A6YYL1 179 aa18.82■□□□□ 0.6
CIRBP-242ENST00000593093 PTPN23Q9H3S7 1636 aa18.81■□□□□ 0.6
CIRBP-242ENST00000593093 FYCO1Q9BQS8 1478 aa18.81■□□□□ 0.6
CIRBP-242ENST00000593093 USP47Q96K76 1375 aa18.8■□□□□ 0.6
CIRBP-242ENST00000593093 CRBNQ96SW2 442 aa18.8■□□□□ 0.6
CIRBP-242ENST00000593093 BACH2Q9BYV9 841 aa18.8■□□□□ 0.6
CIRBP-242ENST00000593093 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.79■□□□□ 0.65e-6■■■□□ 18.7
CIRBP-242ENST00000593093 CUL7Q14999 1698 aa18.79■□□□□ 0.6
CIRBP-242ENST00000593093 DCAF11Q8TEB1 546 aa18.78■□□□□ 0.6
CIRBP-242ENST00000593093 GSE1Q14687 1217 aa18.77■□□□□ 0.6
CIRBP-242ENST00000593093 NFKBIBQ15653 356 aa18.77■□□□□ 0.6
CIRBP-242ENST00000593093 FRAT1Q92837 279 aaPredicted RBP18.76■□□□□ 0.59
CIRBP-242ENST00000593093 DDRGK1Q96HY6 314 aa18.74■□□□□ 0.59
CIRBP-242ENST00000593093 VSIG10Q8N0Z9 540 aa18.74■□□□□ 0.59
CIRBP-242ENST00000593093 GRIN2BQ13224 1484 aa18.73■□□□□ 0.59
CIRBP-242ENST00000593093 EFCAB5A4FU69 1503 aa18.73■□□□□ 0.59
CIRBP-242ENST00000593093 ABCA5Q8WWZ7 1642 aa18.72■□□□□ 0.59
CIRBP-242ENST00000593093 SNAPC4Q5SXM2 1469 aa18.72■□□□□ 0.59
CIRBP-242ENST00000593093 CDK13Q14004 1512 aaKnown RBP18.71■□□□□ 0.59
CIRBP-242ENST00000593093 USP35Q9P2H5 1018 aa18.71■□□□□ 0.59
CIRBP-242ENST00000593093 CFDP1Q9UEE9 299 aaPredicted RBP18.71■□□□□ 0.59
CIRBP-242ENST00000593093 CTTNBP2Q8WZ74 1663 aa18.71■□□□□ 0.59
CIRBP-242ENST00000593093 C20orf194Q5TEA3 1177 aa18.7■□□□□ 0.58
CIRBP-242ENST00000593093 FRAT2O75474 233 aaPredicted RBP18.69■□□□□ 0.58
CIRBP-242ENST00000593093 TARBP1Q13395 1621 aaKnown RBP18.68■□□□□ 0.58
CIRBP-242ENST00000593093 JPH4Q96JJ6 628 aa18.68■□□□□ 0.58
CIRBP-242ENST00000593093 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.68■□□□□ 0.581e-19■□□□□ 10
CIRBP-242ENST00000593093 ANKRD30BQ9BXX2 1392 aa18.68■□□□□ 0.58
CIRBP-242ENST00000593093 SLC24A1O60721 1099 aa18.68■□□□□ 0.58
CIRBP-242ENST00000593093 MYBBP1AQ9BQG0 1328 aaKnown RBP18.67■□□□□ 0.58
CIRBP-242ENST00000593093 KDM5BQ9UGL1 1544 aa18.66■□□□□ 0.58
CIRBP-242ENST00000593093 SLKQ9H2G2 1235 aaPredicted RBP18.65■□□□□ 0.58
CIRBP-242ENST00000593093 DHX29Q7Z478 1369 aaKnown RBP18.65■□□□□ 0.58
CIRBP-242ENST00000593093 GLIPR1L2Q4G1C9 344 aa18.65■□□□□ 0.58
CIRBP-242ENST00000593093 RNF123Q5XPI4 1314 aa18.65■□□□□ 0.58
CIRBP-242ENST00000593093 IFT140Q96RY7 1462 aa18.64■□□□□ 0.57
CIRBP-242ENST00000593093 SPRYD3Q8NCJ5 442 aa18.63■□□□□ 0.57
CIRBP-242ENST00000593093 CFAP43Q8NDM7 1665 aa18.63■□□□□ 0.57
CIRBP-242ENST00000593093 NLRP13Q86W25 1043 aa18.63■□□□□ 0.57
CIRBP-242ENST00000593093 MS4A1P11836 297 aa18.63■□□□□ 0.57
CIRBP-242ENST00000593093 KIF15Q9NS87 1388 aa18.62■□□□□ 0.57
CIRBP-242ENST00000593093 RALBP1Q15311 655 aa18.62■□□□□ 0.57
CIRBP-242ENST00000593093 IQGAP2Q13576 1575 aa18.62■□□□□ 0.57
CIRBP-242ENST00000593093 KDM6BO15054 1643 aa18.61■□□□□ 0.57
CIRBP-242ENST00000593093 CANXP27824 592 aaKnown RBP18.6■□□□□ 0.57
CIRBP-242ENST00000593093 DENND4BO75064 1496 aaPredicted RBP18.6■□□□□ 0.57
CIRBP-242ENST00000593093 WDR43Q15061 677 aaKnown RBP eCLIP18.59■□□□□ 0.57
CIRBP-242ENST00000593093 KTN1Q86UP2 1357 aaKnown RBP18.58■□□□□ 0.57
CIRBP-242ENST00000593093 ZMYND15Q9H091 742 aa18.58■□□□□ 0.57
CIRBP-242ENST00000593093 NUP155O75694 1391 aa18.57■□□□□ 0.56
CIRBP-242ENST00000593093 A0A0U1RQG5 324 aaPredicted RBP18.57■□□□□ 0.56
CIRBP-242ENST00000593093 EPRSP07814 1512 aaKnown RBP18.57■□□□□ 0.56
CIRBP-242ENST00000593093 PBRM1Q86U86 1689 aa18.57■□□□□ 0.56
CIRBP-242ENST00000593093 CCDC146Q8IYE0 955 aa18.56■□□□□ 0.56
CIRBP-242ENST00000593093 RPRD2Q5VT52 1461 aaKnown RBP18.56■□□□□ 0.56
CIRBP-242ENST00000593093 ROCK2O75116 1388 aaKnown RBP18.56■□□□□ 0.56
CIRBP-242ENST00000593093 MAGI3Q5TCQ9 1506 aa18.55■□□□□ 0.56
CIRBP-242ENST00000593093 PLEKHD1A6NEE1 506 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms