RNA–Protein interactions for RNA: ENST00000422395.1

CCR9-204, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 1,331 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-204ENST00000422395 IRX5P78411 483 aaPredicted RBP10.65□□□□□ -0.7
CCR9-204ENST00000422395 PCDHB8Q9UN66 801 aa10.64□□□□□ -0.71
CCR9-204ENST00000422395 ACIN1Q9UKV3 1341 aaKnown RBP10.64□□□□□ -0.71
CCR9-204ENST00000422395 ST18O60284 1047 aa10.63□□□□□ -0.71
CCR9-204ENST00000422395 URB2Q14146 1524 aaKnown RBP10.63□□□□□ -0.71
CCR9-204ENST00000422395 GSE1Q14687 1217 aa10.62□□□□□ -0.71
CCR9-204ENST00000422395 MKRN3Q13064 507 aaKnown RBP10.6□□□□□ -0.71
CCR9-204ENST00000422395 ZNF467Q7Z7K2 595 aaPredicted RBP10.6□□□□□ -0.71
CCR9-204ENST00000422395 C3orf67Q6ZVT6 689 aa10.59□□□□□ -0.71
CCR9-204ENST00000422395 TRIM41Q8WV44 630 aa10.58□□□□□ -0.71
CCR9-204ENST00000422395 TMEM121BQ9BXQ6 578 aaPredicted RBP10.58□□□□□ -0.71
CCR9-204ENST00000422395 CCDC88BA6NC98 1476 aa10.56□□□□□ -0.72
CCR9-204ENST00000422395 LOC105371045A0A1W2PR82 267 aa10.55□□□□□ -0.72
CCR9-204ENST00000422395 VASPP50552 380 aaPredicted RBP10.55□□□□□ -0.72
CCR9-204ENST00000422395 L3MBTL3Q96JM7 780 aaPredicted RBP10.55□□□□□ -0.72
CCR9-204ENST00000422395 G3V3G9 751 aa10.52□□□□□ -0.73
CCR9-204ENST00000422395 IFT140Q96RY7 1462 aa10.51□□□□□ -0.73
CCR9-204ENST00000422395 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.51□□□□□ -0.73
CCR9-204ENST00000422395 TOPBP1Q92547 1522 aa10.51□□□□□ -0.73
CCR9-204ENST00000422395 EIF4G3O43432 1585 aaKnown RBP10.49□□□□□ -0.73
CCR9-204ENST00000422395 DNMBPQ6XZF7 1577 aa10.49□□□□□ -0.73
CCR9-204ENST00000422395 ZNF608Q9ULD9 1512 aaPredicted RBP10.49□□□□□ -0.73
CCR9-204ENST00000422395 PSEN1P49768 467 aa10.49□□□□□ -0.73
CCR9-204ENST00000422395 MARVELD3Q96A59 401 aa10.49□□□□□ -0.73
CCR9-204ENST00000422395 ABCC8Q09428 1581 aa10.49□□□□□ -0.73
CCR9-204ENST00000422395 RIMBP3CA6NJZ7 1639 aa10.47□□□□□ -0.73
CCR9-204ENST00000422395 RIMBP3BA6NNM3 1639 aa10.47□□□□□ -0.73
CCR9-204ENST00000422395 RIMBP3Q9UFD9 1639 aa10.47□□□□□ -0.73
CCR9-204ENST00000422395 CLSPNQ9HAW4 1339 aa10.46□□□□□ -0.73
CCR9-204ENST00000422395 EMP3P54852 163 aa10.46□□□□□ -0.73
CCR9-204ENST00000422395 CHD1O14646 1710 aa10.46□□□□□ -0.74
CCR9-204ENST00000422395 CIZ1Q9ULV3 898 aaPredicted RBP10.45□□□□□ -0.74
CCR9-204ENST00000422395 TARBP1Q13395 1621 aaKnown RBP10.44□□□□□ -0.74
CCR9-204ENST00000422395 CHRM1P11229 460 aaPredicted RBP10.44□□□□□ -0.74
CCR9-204ENST00000422395 PDCD7Q8N8D1 485 aaKnown RBP10.44□□□□□ -0.74
CCR9-204ENST00000422395 PDAP1Q13442 181 aaKnown RBP10.43□□□□□ -0.74
CCR9-204ENST00000422395 NEUROD1Q13562 356 aa10.43□□□□□ -0.74
CCR9-204ENST00000422395 RTN4Q9NQC3 1192 aaKnown RBP10.43□□□□□ -0.74
CCR9-204ENST00000422395 GTF3C3Q9Y5Q9 886 aa10.43□□□□□ -0.74
CCR9-204ENST00000422395 ARHGEF11O15085 1522 aa10.41□□□□□ -0.74
CCR9-204ENST00000422395 MMRN1Q13201 1228 aa10.4□□□□□ -0.74
CCR9-204ENST00000422395 DIEXFQ68CQ4 756 aaKnown RBP10.4□□□□□ -0.74
CCR9-204ENST00000422395 POLA1P09884 1462 aaPredicted RBP10.4□□□□□ -0.75
CCR9-204ENST00000422395 SPNS2Q8IVW8 549 aa10.39□□□□□ -0.75
CCR9-204ENST00000422395 SPOCK2Q92563 424 aa10.39□□□□□ -0.75
CCR9-204ENST00000422395 CABP2Q9NPB3 220 aa10.38□□□□□ -0.75
CCR9-204ENST00000422395 AQRO60306 1485 aaKnown RBP eCLIP10.38□□□□□ -0.75
CCR9-204ENST00000422395 AMER1Q5JTC6 1135 aaPredicted RBP10.36□□□□□ -0.75
CCR9-204ENST00000422395 WDR97A6NE52 1622 aa10.35□□□□□ -0.75
CCR9-204ENST00000422395 FAM205CA6NFA0 338 aa10.34□□□□□ -0.75
CCR9-204ENST00000422395 CCER1Q8TC90 406 aaPredicted RBP10.34□□□□□ -0.75
CCR9-204ENST00000422395 RAD54L2Q9Y4B4 1467 aa10.34□□□□□ -0.75
CCR9-204ENST00000422395 ZNF710Q8N1W2 664 aa10.33□□□□□ -0.76
CCR9-204ENST00000422395 FGD5Q6ZNL6 1462 aa10.33□□□□□ -0.76
CCR9-204ENST00000422395 BOLA1Q9Y3E2 137 aa10.33□□□□□ -0.76
CCR9-204ENST00000422395 SOGA1O94964 1423 aa10.32□□□□□ -0.76
CCR9-204ENST00000422395 HS3ST6Q96QI5 342 aa10.32□□□□□ -0.76
CCR9-204ENST00000422395 CUX1P39880 1505 aa10.31□□□□□ -0.76
CCR9-204ENST00000422395 SNAPC4Q5SXM2 1469 aa10.31□□□□□ -0.76
CCR9-204ENST00000422395 PBRM1Q86U86 1689 aa10.31□□□□□ -0.76
CCR9-204ENST00000422395 TDRD9Q8NDG6 1382 aaKnown RBP10.3□□□□□ -0.76
CCR9-204ENST00000422395 ARAP1Q96P48 1450 aa10.29□□□□□ -0.76
CCR9-204ENST00000422395 DPY19L2Q6NUT2 758 aa10.29□□□□□ -0.76
CCR9-204ENST00000422395 SYNJ1O43426 1573 aa10.28□□□□□ -0.76
CCR9-204ENST00000422395 MAGI1Q96QZ7 1491 aaPredicted RBP10.28□□□□□ -0.76
CCR9-204ENST00000422395 WRNQ14191 1432 aaPredicted RBP eCLIP10.28□□□□□ -0.76
CCR9-204ENST00000422395 CYB5RLQ6IPT4 315 aa10.28□□□□□ -0.76
CCR9-204ENST00000422395 CLASP1Q7Z460 1538 aa10.27□□□□□ -0.76
CCR9-204ENST00000422395 ZNF316A6NFI3 1004 aaPredicted RBP10.27□□□□□ -0.77
CCR9-204ENST00000422395 RIMBP2O15034 1052 aa10.27□□□□□ -0.77
CCR9-204ENST00000422395 GRIN2BQ13224 1484 aa10.26□□□□□ -0.77
CCR9-204ENST00000422395 DOK7Q18PE1 504 aa10.26□□□□□ -0.77
CCR9-204ENST00000422395 IFNLR1Q8IU57 520 aaPredicted RBP10.26□□□□□ -0.77
CCR9-204ENST00000422395 SYNJ2O15056 1496 aa10.25□□□□□ -0.77
CCR9-204ENST00000422395 ILDR1Q86SU0 546 aaPredicted RBP10.24□□□□□ -0.77
CCR9-204ENST00000422395 ABCA5Q8WWZ7 1642 aa10.24□□□□□ -0.77
CCR9-204ENST00000422395 CHMP7Q8WUX9 453 aaPredicted RBP10.23□□□□□ -0.77
CCR9-204ENST00000422395 GAPVD1Q14C86 1478 aa10.22□□□□□ -0.77
CCR9-204ENST00000422395 ERBB3P21860 1342 aa10.22□□□□□ -0.77
CCR9-204ENST00000422395 ABCA10Q8WWZ4 1543 aa10.2□□□□□ -0.78
CCR9-204ENST00000422395 KRTAP3-3Q9BYR6 98 aa10.19□□□□□ -0.78
CCR9-204ENST00000422395 KRTAP3-2Q9BYR7 98 aa10.19□□□□□ -0.78
CCR9-204ENST00000422395 BIVM-ERCC5R4GMW8 1640 aa10.19□□□□□ -0.78
CCR9-204ENST00000422395 EFCAB3Q8N7B9 438 aa10.18□□□□□ -0.78
CCR9-204ENST00000422395 POTEB3A0JP26 581 aa10.17□□□□□ -0.78
CCR9-204ENST00000422395 HOXB1P14653 301 aaPredicted RBP10.17□□□□□ -0.78
CCR9-204ENST00000422395 POTEBQ6S5H4 581 aa10.17□□□□□ -0.78
CCR9-204ENST00000422395 TOP2BQ02880 1626 aa10.17□□□□□ -0.78
CCR9-204ENST00000422395 ADAMTS12P58397 1594 aa10.17□□□□□ -0.78
CCR9-204ENST00000422395 HOXB3P14651 431 aaPredicted RBP10.16□□□□□ -0.78
CCR9-204ENST00000422395 GRIN2AQ12879 1464 aa10.14□□□□□ -0.79
CCR9-204ENST00000422395 EEA1Q15075 1411 aa10.13□□□□□ -0.79
CCR9-204ENST00000422395 CEP170Q5SW79 1584 aa10.13□□□□□ -0.79
CCR9-204ENST00000422395 VARS2Q5ST30 1063 aaKnown RBP10.11□□□□□ -0.79
CCR9-204ENST00000422395 ANP32EQ9BTT0 268 aa10.1□□□□□ -0.79
CCR9-204ENST00000422395 ERCC6L2Q5T890 1561 aa10.1□□□□□ -0.79
CCR9-204ENST00000422395 SHROOM2Q13796 1616 aa10.09□□□□□ -0.79
CCR9-204ENST00000422395 RIOK3O14730 519 aaKnown RBP10.09□□□□□ -0.79
CCR9-204ENST00000422395 SOX12O15370 315 aa10.09□□□□□ -0.79
CCR9-204ENST00000422395 MICALL2Q8IY33 904 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms