RNA–Protein interactions for RNA: tA(UGC)A

TGA1, Transcript of Alanine tRNA (tRNA-Ala), predicted by tRNAscan-SE analysis, yeast

Gene TGA1, Length 73 nt, Biotype tRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TGA1	tA(UGC)A	GAS3	Q03655	524 aa		7.85	□□□□□ -1.15
TGA1	tA(UGC)A	TRS23	Q03784	219 aa		7.85	□□□□□ -1.15
TGA1	tA(UGC)A	ROY1	Q04847	553 aa		7.85	□□□□□ -1.15
TGA1	tA(UGC)A	RAD34	Q06665	692 aa		7.85	□□□□□ -1.15
TGA1	tA(UGC)A	APC9	Q12107	265 aa		7.85	□□□□□ -1.15
TGA1	tA(UGC)A	LEU9	Q12166	604 aa	Known RBP	7.85	□□□□□ -1.15
TGA1	tA(UGC)A	RUD3	Q12234	484 aa	Known RBP	7.85	□□□□□ -1.15
TGA1	tA(UGC)A	FRE7	Q12333	620 aa		7.85	□□□□□ -1.15
TGA1	tA(UGC)A	AHA1	Q12449	350 aa	Known RBP	7.85	□□□□□ -1.15
TGA1	tA(UGC)A	YBR056W-A	I2HB52	66 aa		7.84	□□□□□ -1.15
TGA1	tA(UGC)A	COX6	P00427	148 aa		7.84	□□□□□ -1.15
TGA1	tA(UGC)A	HEM2	P05373	342 aa		7.84	□□□□□ -1.15
TGA1	tA(UGC)A	LAT1	P12695	482 aa	Known RBP	7.84	□□□□□ -1.15
TGA1	tA(UGC)A	KIN2	P13186	1147 aa	Known RBP	7.84	□□□□□ -1.15
TGA1	tA(UGC)A	HOP1	P20050	605 aa		7.84	□□□□□ -1.15
TGA1	tA(UGC)A	IMG1	P25626	169 aa		7.84	□□□□□ -1.15
TGA1	tA(UGC)A	ADE1	P27616	306 aa		7.84	□□□□□ -1.15
TGA1	tA(UGC)A	SFA1	P32771	386 aa		7.84	□□□□□ -1.15
TGA1	tA(UGC)A	YSC84	P32793	468 aa		7.84	□□□□□ -1.15
TGA1	tA(UGC)A	OAF3	P36023	863 aa		7.84	□□□□□ -1.15
TGA1	tA(UGC)A	BEM4	P39011	633 aa		7.84	□□□□□ -1.15
TGA1	tA(UGC)A	SDH1	Q00711	640 aa		7.84	□□□□□ -1.15
TGA1	tA(UGC)A	GPB1	Q08886	897 aa		7.84	□□□□□ -1.15
TGA1	tA(UGC)A	YPL245W	Q12179	454 aa	Known RBP	7.84	□□□□□ -1.15
TGA1	tA(UGC)A	FAS1	P07149	2051 aa	Known RBP	7.83	□□□□□ -1.16
TGA1	tA(UGC)A	RPS21A	P0C0V8	87 aa	Known RBP	7.83	□□□□□ -1.16
TGA1	tA(UGC)A	SEC15	P22224	910 aa		7.83	□□□□□ -1.16
TGA1	tA(UGC)A	YCR051W	P25631	222 aa		7.83	□□□□□ -1.16
TGA1	tA(UGC)A	KIP2	P28743	706 aa		7.83	□□□□□ -1.16
TGA1	tA(UGC)A	RIM101	P33400	625 aa		7.83	□□□□□ -1.16
TGA1	tA(UGC)A	STS1	P38637	319 aa		7.83	□□□□□ -1.16
TGA1	tA(UGC)A	OAF1	P39720	1047 aa	Predicted RBP	7.83	□□□□□ -1.16
TGA1	tA(UGC)A	MNT3	P40549	630 aa		7.83	□□□□□ -1.16
TGA1	tA(UGC)A	YRB1	P41920	201 aa	Known RBP	7.83	□□□□□ -1.16
TGA1	tA(UGC)A	EFM5	P53200	248 aa	Known RBP	7.83	□□□□□ -1.16
TGA1	tA(UGC)A	YML131W	Q03102	365 aa		7.83	□□□□□ -1.16
TGA1	tA(UGC)A	RSM10	Q03201	203 aa		7.83	□□□□□ -1.16
TGA1	tA(UGC)A	SEC10	Q06245	871 aa		7.83	□□□□□ -1.16
TGA1	tA(UGC)A	ENT4	Q07872	247 aa		7.83	□□□□□ -1.16
TGA1	tA(UGC)A	YPR011C	Q12251	326 aa		7.83	□□□□□ -1.16
TGA1	tA(UGC)A	RGT2	Q12300	763 aa		7.83	□□□□□ -1.16
TGA1	tA(UGC)A	RHO2	P06781	192 aa		7.82	□□□□□ -1.16
TGA1	tA(UGC)A	SRV2	P17555	526 aa	Known RBP	7.82	□□□□□ -1.16
TGA1	tA(UGC)A	AGP1	P25376	633 aa		7.82	□□□□□ -1.16
TGA1	tA(UGC)A	PRO1	P32264	428 aa		7.82	□□□□□ -1.16
TGA1	tA(UGC)A	CBF5	P33322	483 aa	Known RBP RIP-Chip data	7.82	□□□□□ -1.16	not detected
TGA1	tA(UGC)A	RPS1A	P33442	255 aa	Known RBP	7.82	□□□□□ -1.16
TGA1	tA(UGC)A	RRN10	P38204	145 aa		7.82	□□□□□ -1.16
TGA1	tA(UGC)A	YDR089W	P38966	869 aa		7.82	□□□□□ -1.16
TGA1	tA(UGC)A	PTC2	P39966	464 aa	Known RBP	7.82	□□□□□ -1.16
TGA1	tA(UGC)A	YJR154W	P47181	346 aa		7.82	□□□□□ -1.16
TGA1	tA(UGC)A	KXD1	P53158	218 aa		7.82	□□□□□ -1.16
TGA1	tA(UGC)A	YGR250C	P53316	781 aa	Known RBP	7.82	□□□□□ -1.16
TGA1	tA(UGC)A	YGR266W	P53326	701 aa		7.82	□□□□□ -1.16
TGA1	tA(UGC)A	FAR8	Q05040	523 aa		7.82	□□□□□ -1.16
TGA1	tA(UGC)A	SFH1	Q06168	426 aa		7.82	□□□□□ -1.16
TGA1	tA(UGC)A	HDA3	Q06623	655 aa		7.82	□□□□□ -1.16
TGA1	tA(UGC)A	TMA46	Q12000	345 aa	Known RBP	7.82	□□□□□ -1.16
TGA1	tA(UGC)A	IOC2	Q12072	812 aa		7.82	□□□□□ -1.16
TGA1	tA(UGC)A	SPE4	Q12455	300 aa		7.82	□□□□□ -1.16
TGA1	tA(UGC)A	MHT1	Q12525	324 aa		7.82	□□□□□ -1.16
TGA1	tA(UGC)A	PRP6	P19735	899 aa	Predicted RBP	7.81	□□□□□ -1.16
TGA1	tA(UGC)A	MRPL15	P36523	253 aa		7.81	□□□□□ -1.16
TGA1	tA(UGC)A	YBR071W	P38243	211 aa		7.81	□□□□□ -1.16
TGA1	tA(UGC)A	YHR112C	P38716	378 aa		7.81	□□□□□ -1.16
TGA1	tA(UGC)A	LIN1	P38852	340 aa	Predicted RBP	7.81	□□□□□ -1.16
TGA1	tA(UGC)A	MET30	P39014	640 aa		7.81	□□□□□ -1.16
TGA1	tA(UGC)A	PRM2	P40534	656 aa		7.81	□□□□□ -1.16
TGA1	tA(UGC)A	AZF1	P41696	914 aa		7.81	□□□□□ -1.16
TGA1	tA(UGC)A	GCD10	P41814	478 aa		7.81	□□□□□ -1.16
TGA1	tA(UGC)A	MET12	P46151	657 aa		7.81	□□□□□ -1.16
TGA1	tA(UGC)A	YGL176C	P46945	554 aa		7.81	□□□□□ -1.16
TGA1	tA(UGC)A	LSM3	P57743	89 aa	Known RBP	7.81	□□□□□ -1.16
TGA1	tA(UGC)A	VHS3	Q08438	674 aa		7.81	□□□□□ -1.16
TGA1	tA(UGC)A	GLE1	Q12315	538 aa		7.81	□□□□□ -1.16
TGA1	tA(UGC)A	NCA2	Q12374	616 aa		7.81	□□□□□ -1.16
TGA1	tA(UGC)A	TY4A-H	Q6Q5P6	413 aa		7.81	□□□□□ -1.16
TGA1	tA(UGC)A	PNO1	Q99216	274 aa	Known RBP	7.81	□□□□□ -1.16
TGA1	tA(UGC)A	HSC82	P15108	705 aa	Known RBP	7.8	□□□□□ -1.16
TGA1	tA(UGC)A	SIN4	P32259	974 aa		7.8	□□□□□ -1.16
TGA1	tA(UGC)A	SRB5	P32585	307 aa		7.8	□□□□□ -1.16
TGA1	tA(UGC)A	YRO2	P38079	344 aa		7.8	□□□□□ -1.16
TGA1	tA(UGC)A	MNL1	P38888	796 aa		7.8	□□□□□ -1.16
TGA1	tA(UGC)A	SAP1	P39955	897 aa	Known RBP	7.8	□□□□□ -1.16
TGA1	tA(UGC)A	APQ12	P40532	138 aa		7.8	□□□□□ -1.16
TGA1	tA(UGC)A	VMA13	P41807	478 aa	Known RBP	7.8	□□□□□ -1.16
TGA1	tA(UGC)A	FKH2	P41813	862 aa		7.8	□□□□□ -1.16
TGA1	tA(UGC)A	ARC1	P46672	376 aa	Known RBP	7.8	□□□□□ -1.16
TGA1	tA(UGC)A	YGR012W	P53206	393 aa		7.8	□□□□□ -1.16
TGA1	tA(UGC)A	YNL260C	P53846	198 aa		7.8	□□□□□ -1.16
TGA1	tA(UGC)A	SLM2	P53955	656 aa		7.8	□□□□□ -1.16
TGA1	tA(UGC)A	MPS1	P54199	764 aa		7.8	□□□□□ -1.16
TGA1	tA(UGC)A	SED5	Q01590	340 aa		7.8	□□□□□ -1.16
TGA1	tA(UGC)A	MRS2	Q01926	470 aa		7.8	□□□□□ -1.16
TGA1	tA(UGC)A	SIZ1	Q04195	904 aa		7.8	□□□□□ -1.16
TGA1	tA(UGC)A	VID22	Q05934	901 aa		7.8	□□□□□ -1.16
TGA1	tA(UGC)A	GYP1	Q08484	637 aa		7.8	□□□□□ -1.16
TGA1	tA(UGC)A	YOR223W	Q12015	292 aa		7.8	□□□□□ -1.16
TGA1	tA(UGC)A	SRN2	Q99176	213 aa		7.8	□□□□□ -1.16
TGA1	tA(UGC)A	BRR1	Q99177	341 aa	Predicted RBP	7.8	□□□□□ -1.16

Retrieved 100 of 5,963 RNA–protein pairs in 57.4 ms