RNA–Protein interactions for RNA: snR41

snR41, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR41, Length 95 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR41snR41 SLC1P33333 303 aa2.55□□□□□ -2
snR41snR41 ICS2P38284 255 aa2.55□□□□□ -2
snR41snR41 YGR021WP53212 290 aa2.55□□□□□ -2
snR41snR41 YLR152CP54072 576 aa2.55□□□□□ -2
snR41snR41 ELP3Q02908 557 aaKnown RBP2.55□□□□□ -2
snR41snR41 IVY1Q04934 453 aa2.55□□□□□ -2
snR41snR41 HIP1P06775 603 aa2.54□□□□□ -2
snR41snR41 RAD52P06778 471 aaKnown RBP2.54□□□□□ -2
snR41snR41 PEP4P07267 405 aaKnown RBP2.54□□□□□ -2
snR41snR41 EXO70P19658 623 aa2.54□□□□□ -2
snR41snR41 SUI2P20459 304 aaKnown RBP2.54□□□□□ -2
snR41snR41 ARO2P28777 376 aaKnown RBP2.54□□□□□ -2
snR41snR41 SSE2P32590 693 aaKnown RBP2.54□□□□□ -2
snR41snR41 YBR144CP34215 104 aa2.54□□□□□ -2
snR41snR41 YBL059WP34224 193 aa2.54□□□□□ -2
snR41snR41 CIN4P39110 191 aa2.54□□□□□ -2
snR41snR41 IES5P40060 125 aa2.54□□□□□ -2
snR41snR41 KAP123P40069 1113 aaKnown RBP2.54□□□□□ -2
snR41snR41 REE1P40893 198 aa2.54□□□□□ -2
snR41snR41 TMC1Q08422 150 aaPredicted RBP2.54□□□□□ -2
snR41snR41 MF(ALPHA)1P01149 165 aa2.53□□□□□ -2
snR41snR41 HHF1P02309 103 aaKnown RBP2.53□□□□□ -2
snR41snR41 ARD1P07347 238 aaPredicted RBP2.53□□□□□ -2
snR41snR41 CPR1P14832 162 aaKnown RBP2.53□□□□□ -2
snR41snR41 HEM15P16622 393 aa2.53□□□□□ -2
snR41snR41 MSN2P33748 704 aa2.53□□□□□ -2
snR41snR41 GWT1P47026 490 aa2.53□□□□□ -2
snR41snR41 PBA1Q05778 276 aa2.53□□□□□ -2
snR41snR41 RRG7Q08774 242 aaPredicted RBP2.53□□□□□ -2
snR41snR41 NAT1P12945 854 aaKnown RBP2.52□□□□□ -2.01
snR41snR41 MRP4P32902 394 aa2.52□□□□□ -2.01
snR41snR41 AUR1P36107 401 aaPredicted RBP2.52□□□□□ -2.01
snR41snR41 DUG2P38149 878 aa2.52□□□□□ -2.01
snR41snR41 MAL33P38157 468 aa2.52□□□□□ -2.01
snR41snR41 NDT80P38830 627 aa2.52□□□□□ -2.01
snR41snR41 TIS11P47977 285 aa2.52□□□□□ -2.01
snR41snR41 PHO92Q06390 306 aa2.52□□□□□ -2.01
snR41snR41 LUC7Q07508 261 aaPredicted RBP2.52□□□□□ -2.01
snR41snR41 HRT3Q12347 344 aa2.52□□□□□ -2.01
snR41snR41 FUM1P08417 488 aaKnown RBP2.51□□□□□ -2.01
snR41snR41 CDC24P11433 854 aaPredicted RBP2.51□□□□□ -2.01
snR41snR41 SHP1P34223 423 aa2.51□□□□□ -2.01
snR41snR41 RRN3P36070 627 aa2.51□□□□□ -2.01
snR41snR41 SWD3P38123 315 aa2.51□□□□□ -2.01
snR41snR41 ELP2P42935 788 aa2.51□□□□□ -2.01
snR41snR41 GPI1P53306 609 aa2.51□□□□□ -2.01
snR41snR41 CAF40P53829 373 aa2.51□□□□□ -2.01
snR41snR41 ARK1P53974 638 aa2.51□□□□□ -2.01
snR41snR41 RAD30Q04049 632 aa2.51□□□□□ -2.01
snR41snR41 RBS1Q05672 457 aaKnown RBP2.51□□□□□ -2.01
snR41snR41 YDL057WQ07379 328 aa2.51□□□□□ -2.01
snR41snR41 KEL3Q08979 651 aaPredicted RBP2.51□□□□□ -2.01
snR41snR41 CHS1P08004 1131 aa2.5□□□□□ -2.01
snR41snR41 KAR3P17119 729 aa2.5□□□□□ -2.01
snR41snR41 YIH1P25637 258 aa2.5□□□□□ -2.01
snR41snR41 TIF4631P39935 952 aaKnown RBP2.5□□□□□ -2.01
snR41snR41 FAU1P40099 211 aa2.5□□□□□ -2.01
snR41snR41 YIL067CP40514 678 aa2.5□□□□□ -2.01
snR41snR41 ALK1P43633 760 aaKnown RBP2.5□□□□□ -2.01
snR41snR41 CBK1P53894 756 aa2.5□□□□□ -2.01
snR41snR41 VIP1Q06685 1146 aaKnown RBP2.5□□□□□ -2.01
snR41snR41 ESA1Q08649 445 aa2.5□□□□□ -2.01
snR41snR41 CFT2Q12102 859 aaPredicted RBP2.5□□□□□ -2.01
snR41snR41 SPE4Q12455 300 aa2.5□□□□□ -2.01
snR41snR41 HSH49Q99181 213 aaPredicted RBP2.5□□□□□ -2.01
snR41snR41 RPL19AP0CX82 189 aaKnown RBP2.49□□□□□ -2.01
snR41snR41 RPL19BP0CX83 189 aaPredicted RBP2.49□□□□□ -2.01
snR41snR41 CLN3P13365 580 aa2.49□□□□□ -2.01
snR41snR41 GLK1P17709 500 aaKnown RBP2.49□□□□□ -2.01
snR41snR41 ART10P18634 518 aaKnown RBP2.49□□□□□ -2.01
snR41snR41 LSB5P25369 354 aa2.49□□□□□ -2.01
snR41snR41 TCM62P38228 572 aaKnown RBP2.49□□□□□ -2.01
snR41snR41 GCD10P41814 478 aa2.49□□□□□ -2.01
snR41snR41 BSC5P53755 489 aa2.49□□□□□ -2.01
snR41snR41 YSA1Q01976 231 aa2.49□□□□□ -2.01
snR41snR41 BUD22Q04347 519 aaKnown RBP2.49□□□□□ -2.01
snR41snR41 MRPL35Q06678 367 aa2.49□□□□□ -2.01
snR41snR41 RBD2Q12270 262 aa2.49□□□□□ -2.01
snR41snR41 PRE8P23639 250 aa2.48□□□□□ -2.01
snR41snR41 MRS6P32864 603 aaKnown RBP2.48□□□□□ -2.01
snR41snR41 MFT1P33441 392 aaKnown RBP2.48□□□□□ -2.01
snR41snR41 RRT5P43607 289 aa2.48□□□□□ -2.01
snR41snR41 ART5P53244 586 aaKnown RBP2.48□□□□□ -2.01
snR41snR41 TOF2Q02208 771 aa2.48□□□□□ -2.01
snR41snR41 PIR3Q03180 325 aa2.48□□□□□ -2.01
snR41snR41 THP1Q08231 455 aa2.48□□□□□ -2.01
snR41snR41 FMP40Q08968 688 aaPredicted RBP2.48□□□□□ -2.01
snR41snR41 ADH2P00331 348 aaKnown RBP2.47□□□□□ -2.01
snR41snR41 MRP13P12686 339 aa2.47□□□□□ -2.01
snR41snR41 CPR4P25334 318 aa2.47□□□□□ -2.01
snR41snR41 ELO2P25358 347 aa2.47□□□□□ -2.01
snR41snR41 SDH3P33421 198 aa2.47□□□□□ -2.01
snR41snR41 BNA4P38169 460 aa2.47□□□□□ -2.01
snR41snR41 CCT6P39079 546 aa2.47□□□□□ -2.01
snR41snR41 DPH1P40487 425 aaKnown RBP2.47□□□□□ -2.01
snR41snR41 YKU80Q04437 629 aa2.47□□□□□ -2.01
snR41snR41 THP3Q12049 470 aaKnown RBP2.47□□□□□ -2.01
snR41snR41 SKM1Q12469 655 aa2.47□□□□□ -2.01
snR41snR41 CDC60P26637 1090 aaKnown RBP2.46□□□□□ -2.02
snR41snR41 AIM22P47051 409 aa2.46□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms