RNA–Protein interactions for RNA: YPR032W

SRO7, Transcript of Effector of Rab GTPase Sec4p, yeastyeast

Gene SRO7, Length 3,102 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRO7YPR032W RAD7P06779 565 aa3.92□□□□□ -1.78
SRO7YPR032W AAC3P18238 307 aa3.92□□□□□ -1.78
SRO7YPR032W PRP5P21372 849 aaPredicted RBP3.92□□□□□ -1.78
SRO7YPR032W TMT1P32643 299 aa3.92□□□□□ -1.78
SRO7YPR032W YKR051WP36142 418 aa3.92□□□□□ -1.78
SRO7YPR032W ALG14P38242 237 aa3.92□□□□□ -1.78
SRO7YPR032W ERV15P38312 142 aa3.92□□□□□ -1.78
SRO7YPR032W ATG12P38316 186 aa3.92□□□□□ -1.78
SRO7YPR032W YBR238CP38330 731 aaKnown RBP3.92□□□□□ -1.78
SRO7YPR032W RTC3P38804 111 aaPredicted RBP3.92□□□□□ -1.78
SRO7YPR032W SCC4P40090 624 aa3.92□□□□□ -1.78
SRO7YPR032W IMA5P40884 581 aa3.92□□□□□ -1.78
SRO7YPR032W CNN1P43618 361 aa3.92□□□□□ -1.78
SRO7YPR032W DOC1P53068 250 aa3.92□□□□□ -1.78
SRO7YPR032W YGR168CP53293 376 aa3.92□□□□□ -1.78
SRO7YPR032W HXT11P54862 567 aa3.92□□□□□ -1.78
SRO7YPR032W NAM8Q00539 523 aaKnown RBP3.92□□□□□ -1.78
SRO7YPR032W MTD1Q02046 320 aaKnown RBP3.92□□□□□ -1.78
SRO7YPR032W ARL3Q02804 198 aa3.92□□□□□ -1.78
SRO7YPR032W YMR209CQ03648 457 aa3.92□□□□□ -1.78
SRO7YPR032W YML037CQ03703 340 aa3.92□□□□□ -1.78
SRO7YPR032W INM2Q05533 292 aa3.92□□□□□ -1.78
SRO7YPR032W APC9Q12107 265 aa3.92□□□□□ -1.78
SRO7YPR032W MDM32Q12171 622 aa3.92□□□□□ -1.78
SRO7YPR032W HAL9Q12180 1030 aa3.92□□□□□ -1.78
SRO7YPR032W YLL058WQ12198 575 aa3.92□□□□□ -1.78
SRO7YPR032W YGK3Q12222 375 aaPredicted RBP3.92□□□□□ -1.78
SRO7YPR032W BMT6Q12291 365 aa3.92□□□□□ -1.78
SRO7YPR032W PST2Q12335 198 aaKnown RBP3.92□□□□□ -1.78
SRO7YPR032W CBP6P07253 162 aaPredicted RBP3.92□□□□□ -1.78
SRO7YPR032W MET16P18408 261 aaPredicted RBP3.92□□□□□ -1.78
SRO7YPR032W HNM1P19807 563 aa3.92□□□□□ -1.78
SRO7YPR032W MGR1P25573 417 aa3.92□□□□□ -1.78
SRO7YPR032W SER1P33330 395 aaKnown RBP3.92□□□□□ -1.78
SRO7YPR032W ABZ1P37254 787 aaPredicted RBP3.92□□□□□ -1.78
SRO7YPR032W ROT2P38138 954 aa3.92□□□□□ -1.78
SRO7YPR032W GIC1P38785 314 aa3.92□□□□□ -1.78
SRO7YPR032W VPS45P38932 577 aa3.92□□□□□ -1.78
SRO7YPR032W RFC2P40348 353 aa3.92□□□□□ -1.78
SRO7YPR032W YIL024CP40543 189 aa3.92□□□□□ -1.78
SRO7YPR032W AAD10P47182 288 aa3.92□□□□□ -1.78
SRO7YPR032W PMT5P52867 743 aa3.92□□□□□ -1.78
SRO7YPR032W YGR067CP53243 804 aa3.92□□□□□ -1.78
SRO7YPR032W MKC7P53379 596 aa3.92□□□□□ -1.78
SRO7YPR032W INN1P53901 409 aa3.92□□□□□ -1.78
SRO7YPR032W ELP3Q02908 557 aaKnown RBP3.92□□□□□ -1.78
SRO7YPR032W THI7Q05998 598 aa3.92□□□□□ -1.78
SRO7YPR032W SPO77Q06134 477 aa3.92□□□□□ -1.78
SRO7YPR032W CDA2Q06703 312 aa3.92□□□□□ -1.78
SRO7YPR032W YOL159CQ08300 171 aa3.92□□□□□ -1.78
SRO7YPR032W TUM1Q08686 304 aaKnown RBP3.92□□□□□ -1.78
SRO7YPR032W YPL199CQ08954 240 aa3.92□□□□□ -1.78
SRO7YPR032W TYW1Q08960 810 aaKnown RBP3.92□□□□□ -1.78
SRO7YPR032W RGS2Q99188 309 aa3.92□□□□□ -1.78
SRO7YPR032W ECM29P38737 1868 aa3.91□□□□□ -1.78
SRO7YPR032W STE3P06783 470 aa3.91□□□□□ -1.78
SRO7YPR032W MAS1P10507 462 aa3.91□□□□□ -1.78
SRO7YPR032W VMA16P23968 213 aa3.91□□□□□ -1.78
SRO7YPR032W PHA2P32452 334 aa3.91□□□□□ -1.78
SRO7YPR032W SSO2P39926 295 aa3.91□□□□□ -1.78
SRO7YPR032W UBP9P39967 754 aa3.91□□□□□ -1.78
SRO7YPR032W TIR3P40552 269 aa3.91□□□□□ -1.78
SRO7YPR032W CLA4P48562 842 aa3.91□□□□□ -1.78
SRO7YPR032W NBP35P52920 328 aa3.91□□□□□ -1.78
SRO7YPR032W OKP1P53298 406 aa3.91□□□□□ -1.78
SRO7YPR032W BUD32P53323 261 aa3.91□□□□□ -1.78
SRO7YPR032W SRP1Q02821 542 aaKnown RBP3.91□□□□□ -1.78
SRO7YPR032W ENT5Q03769 411 aaKnown RBP3.91□□□□□ -1.78
SRO7YPR032W TAF11Q04226 346 aa3.91□□□□□ -1.78
SRO7YPR032W CSM3Q04659 317 aa3.91□□□□□ -1.78
SRO7YPR032W IRC3Q06683 689 aa3.91□□□□□ -1.78
SRO7YPR032W DIB1Q06819 143 aaPredicted RBP3.91□□□□□ -1.78
SRO7YPR032W WHI4Q07655 649 aaKnown RBP3.91□□□□□ -1.78
SRO7YPR032W YOS9Q99220 542 aa3.91□□□□□ -1.78
SRO7YPR032W GCN4P03069 281 aa3.91□□□□□ -1.78
SRO7YPR032W REP2P03872 296 aa3.91□□□□□ -1.78
SRO7YPR032W ZWF1P11412 505 aaKnown RBP3.91□□□□□ -1.78
SRO7YPR032W PHO8P11491 566 aa3.91□□□□□ -1.78
SRO7YPR032W ABF1P14164 731 aa3.91□□□□□ -1.78
SRO7YPR032W HPR1P17629 752 aaKnown RBP3.91□□□□□ -1.78
SRO7YPR032W DBP1P24784 617 aaKnown RBP3.91□□□□□ -1.78
SRO7YPR032W CIN8P27895 1000 aa3.91□□□□□ -1.78
SRO7YPR032W UBC8P28263 218 aa3.91□□□□□ -1.78
SRO7YPR032W HRR25P29295 494 aaKnown RBP3.91□□□□□ -1.78
SRO7YPR032W DBF20P32328 564 aa3.91□□□□□ -1.78
SRO7YPR032W GSH1P32477 678 aa3.91□□□□□ -1.78
SRO7YPR032W NAB2P32505 525 aaKnown RBP RIP-Chip data3.91□□□□□ -1.78not detected
SRO7YPR032W UTR4P32626 227 aa3.91□□□□□ -1.78
SRO7YPR032W FRE1P32791 686 aa3.91□□□□□ -1.78
SRO7YPR032W VPS17P32913 551 aa3.91□□□□□ -1.78
SRO7YPR032W AVT5P38176 459 aa3.91□□□□□ -1.78
SRO7YPR032W MIT1P40002 666 aa3.91□□□□□ -1.78
SRO7YPR032W YJL218WP40892 196 aaKnown RBP3.91□□□□□ -1.78
SRO7YPR032W VMA13P41807 478 aaKnown RBP3.91□□□□□ -1.78
SRO7YPR032W CAF16P43569 289 aa3.91□□□□□ -1.78
SRO7YPR032W ALY2P47029 1046 aa3.91□□□□□ -1.78
SRO7YPR032W YJL043WP47053 257 aa3.91□□□□□ -1.78
SRO7YPR032W YNL181WP53878 407 aa3.91□□□□□ -1.78
SRO7YPR032W STP1Q00947 519 aa3.91□□□□□ -1.78
SRO7YPR032W TOF2Q02208 771 aa3.91□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 27.3 ms