RNA–Protein interactions for RNA: YPL042C

SSN3, Transcript of Cyclin-dependent protein kinase, yeastyeast

Gene SSN3, Length 1,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN3YPL042C SFB2P53953 876 aa9.45□□□□□ -0.9
SSN3YPL042C KTR5P53966 522 aaPredicted RBP9.45□□□□□ -0.9
SSN3YPL042C KAP120Q02932 1032 aa9.45□□□□□ -0.9
SSN3YPL042C CLU1Q03690 1277 aaKnown RBP9.45□□□□□ -0.9
SSN3YPL042C SHE9Q04172 456 aa9.45□□□□□ -0.9
SSN3YPL042C BOP2Q06150 570 aa9.45□□□□□ -0.9
SSN3YPL042C ARO10Q06408 635 aa9.45□□□□□ -0.9
SSN3YPL042C NDJ1Q12366 352 aa9.45□□□□□ -0.9
SSN3YPL042C NSI1Q12457 570 aa9.45□□□□□ -0.9
SSN3YPL042C SKS1Q12505 502 aa9.45□□□□□ -0.9
SSN3YPL042C KIN2P13186 1147 aaKnown RBP9.44□□□□□ -0.9
SSN3YPL042C PDE1P22434 369 aa9.44□□□□□ -0.9
SSN3YPL042C ADY2P25613 283 aa9.44□□□□□ -0.9
SSN3YPL042C UTR2P32623 467 aa9.44□□□□□ -0.9
SSN3YPL042C KES1P35844 434 aaKnown RBP9.44□□□□□ -0.9
SSN3YPL042C YBP1P38315 674 aa9.44□□□□□ -0.9
SSN3YPL042C SPC97P38863 823 aa9.44□□□□□ -0.9
SSN3YPL042C PIC2P40035 300 aa9.44□□□□□ -0.9
SSN3YPL042C TRS85P46944 698 aa9.44□□□□□ -0.9
SSN3YPL042C OAZ1Q02803 292 aa9.44□□□□□ -0.9
SSN3YPL042C PIR3Q03180 325 aa9.44□□□□□ -0.9
SSN3YPL042C FAR8Q05040 523 aa9.44□□□□□ -0.9
SSN3YPL042C BCP1Q06338 283 aa9.44□□□□□ -0.9
SSN3YPL042C YPD1Q07688 167 aa9.44□□□□□ -0.9
SSN3YPL042C NCA2Q12374 616 aa9.44□□□□□ -0.9
SSN3YPL042C SPE1P08432 466 aa9.43□□□□□ -0.9
SSN3YPL042C CKA1P15790 372 aa9.43□□□□□ -0.9
SSN3YPL042C SRV2P17555 526 aaKnown RBP9.43□□□□□ -0.9
SSN3YPL042C URK1P27515 501 aa9.43□□□□□ -0.9
SSN3YPL042C PMI40P29952 429 aaKnown RBP9.43□□□□□ -0.9
SSN3YPL042C PMT1P33775 817 aa9.43□□□□□ -0.9
SSN3YPL042C CAF4P36130 643 aa9.43□□□□□ -0.9
SSN3YPL042C MPT5P39016 859 aaKnown RBP RIP-Chip data9.43□□□□□ -0.9not detected
SSN3YPL042C NUP60P39705 539 aa9.43□□□□□ -0.9
SSN3YPL042C PCL6P40038 420 aa9.43□□□□□ -0.9
SSN3YPL042C UBP7P40453 1071 aa9.43□□□□□ -0.9
SSN3YPL042C TED1P40533 473 aa9.43□□□□□ -0.9
SSN3YPL042C MSS2P40990 351 aa9.43□□□□□ -0.9
SSN3YPL042C EMW1P42842 904 aaKnown RBP9.43□□□□□ -0.9
SSN3YPL042C LOH1P47055 219 aa9.43□□□□□ -0.9
SSN3YPL042C MON1P53129 644 aa9.43□□□□□ -0.9
SSN3YPL042C UTP8P53276 713 aaKnown RBP9.43□□□□□ -0.9
SSN3YPL042C NRD1P53617 575 aaKnown RBP RIP-Chip data9.43□□□□□ -0.9not detected
SSN3YPL042C MRS2Q01926 470 aa9.43□□□□□ -0.9
SSN3YPL042C RMI1Q02685 241 aa9.43□□□□□ -0.9
SSN3YPL042C RSN1Q03516 953 aa9.43□□□□□ -0.9
SSN3YPL042C MFB1Q04922 465 aa9.43□□□□□ -0.9
SSN3YPL042C RTT10Q08924 1013 aa9.43□□□□□ -0.9
SSN3YPL042C LDB17Q12342 491 aa9.43□□□□□ -0.9
SSN3YPL042C HXK2P04807 486 aaKnown RBP9.42□□□□□ -0.9
SSN3YPL042C MRM1P25270 412 aa9.42□□□□□ -0.9
SSN3YPL042C SUA5P32579 426 aa9.42□□□□□ -0.9
SSN3YPL042C MAC1P35192 417 aa9.42□□□□□ -0.9
SSN3YPL042C YBR184WP38299 523 aa9.42□□□□□ -0.9
SSN3YPL042C URA8P38627 578 aaPredicted RBP9.42□□□□□ -0.9
SSN3YPL042C ARP4P80428 489 aa9.42□□□□□ -0.9
SSN3YPL042C SLT2Q00772 484 aa9.42□□□□□ -0.9
SSN3YPL042C PLP1Q04004 230 aa9.42□□□□□ -0.9
SSN3YPL042C TGS1Q12052 315 aa9.42□□□□□ -0.9
SSN3YPL042C AEP3Q12089 606 aa9.42□□□□□ -0.9
SSN3YPL042C LPX1Q12405 387 aaKnown RBP9.42□□□□□ -0.9
SSN3YPL042C APA2P22108 325 aa9.42□□□□□ -0.9
SSN3YPL042C DBF2P22204 572 aa9.42□□□□□ -0.9
SSN3YPL042C PEX1P24004 1043 aa9.42□□□□□ -0.9
SSN3YPL042C GID7P25569 745 aa9.42□□□□□ -0.9
SSN3YPL042C YKR015CP36111 568 aa9.42□□□□□ -0.9
SSN3YPL042C SFB3P38810 929 aa9.42□□□□□ -0.9
SSN3YPL042C JLP2P40206 208 aa9.42□□□□□ -0.9
SSN3YPL042C ENT5Q03769 411 aaKnown RBP9.42□□□□□ -0.9
SSN3YPL042C PML1Q07930 204 aaPredicted RBP9.42□□□□□ -0.9
SSN3YPL042C YPQ1Q12010 308 aa9.42□□□□□ -0.9
SSN3YPL042C MET17P06106 444 aa9.41□□□□□ -0.9
SSN3YPL042C RSR1P13856 272 aa9.41□□□□□ -0.9
SSN3YPL042C MTF1P14908 341 aaKnown RBP9.41□□□□□ -0.9
SSN3YPL042C URA10P30402 227 aa9.41□□□□□ -0.9
SSN3YPL042C MLS1P30952 554 aa9.41□□□□□ -0.9
SSN3YPL042C VMA6P32366 345 aaKnown RBP9.41□□□□□ -0.9
SSN3YPL042C LRG1P35688 1017 aa9.41□□□□□ -0.9
SSN3YPL042C PIG2P40187 538 aa9.41□□□□□ -0.9
SSN3YPL042C QDR2P40474 542 aa9.41□□□□□ -0.9
SSN3YPL042C DPH1P40487 425 aaKnown RBP9.41□□□□□ -0.9
SSN3YPL042C QRI7P43122 407 aa9.41□□□□□ -0.9
SSN3YPL042C NIT3P49954 291 aa9.41□□□□□ -0.9
SSN3YPL042C HSV2P50079 448 aaPredicted RBP9.41□□□□□ -0.9
SSN3YPL042C TUB4P53378 473 aa9.41□□□□□ -0.9
SSN3YPL042C SLU7Q02775 382 aaKnown RBP9.41□□□□□ -0.9
SSN3YPL042C MTQ2Q03920 221 aaPredicted RBP9.41□□□□□ -0.9
SSN3YPL042C YLR456WQ06199 204 aa9.41□□□□□ -0.9
SSN3YPL042C BSP1Q06604 576 aa9.41□□□□□ -0.9
SSN3YPL042C SWC7Q06707 132 aa9.41□□□□□ -0.9
SSN3YPL042C VHS3Q08438 674 aa9.41□□□□□ -0.9
SSN3YPL042C AFI1Q99222 893 aa9.41□□□□□ -0.9
SSN3YPL042C GPA2P10823 449 aa9.4□□□□□ -0.9
SSN3YPL042C PHO91P27514 894 aa9.4□□□□□ -0.9
SSN3YPL042C SIN4P32259 974 aa9.4□□□□□ -0.9
SSN3YPL042C HEM12P32347 362 aaPredicted RBP9.4□□□□□ -0.9
SSN3YPL042C ETR1P38071 380 aa9.4□□□□□ -0.9
SSN3YPL042C SAF1P38352 637 aa9.4□□□□□ -0.9
SSN3YPL042C REV7P38927 245 aa9.4□□□□□ -0.9
SSN3YPL042C YDR089WP38966 869 aa9.4□□□□□ -0.9
Retrieved 100 of 5,963 RNA–protein pairs in 112.1 ms