RNA–Protein interactions for RNA: YOR247W

SRL1, Transcript of Mannoprotein that exhibits a tight association with the cell wall, yeastyeast

Gene SRL1, Length 633 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRL1YOR247W COS7Q07788 383 aa3.21□□□□□ -1.9
SRL1YOR247W MED2Q12124 431 aa3.21□□□□□ -1.9
SRL1YOR247W HSP42Q12329 375 aa3.21□□□□□ -1.9
SRL1YOR247W RAV1P47104 1357 aa3.21□□□□□ -1.9
SRL1YOR247W PGK1P00560 416 aaKnown RBP3.2□□□□□ -1.9
SRL1YOR247W GPH1P06738 902 aaKnown RBP3.2□□□□□ -1.9
SRL1YOR247W COR1P07256 457 aa3.2□□□□□ -1.9
SRL1YOR247W YMR085WP0CF18 432 aa3.2□□□□□ -1.9
SRL1YOR247W ELO2P25358 347 aa3.2□□□□□ -1.9
SRL1YOR247W MGM1P32266 881 aa3.2□□□□□ -1.9
SRL1YOR247W ECM32P32644 1121 aaKnown RBP3.2□□□□□ -1.9
SRL1YOR247W GYP6P32806 458 aa3.2□□□□□ -1.9
SRL1YOR247W LTV1P34078 463 aa3.2□□□□□ -1.9
SRL1YOR247W SCO2P38072 301 aa3.2□□□□□ -1.9
SRL1YOR247W ARA1P38115 344 aa3.2□□□□□ -1.9
SRL1YOR247W BNA4P38169 460 aa3.2□□□□□ -1.9
SRL1YOR247W CAJ1P39101 391 aa3.2□□□□□ -1.9
SRL1YOR247W LCB2P40970 561 aa3.2□□□□□ -1.9
SRL1YOR247W AIM22P47051 409 aa3.2□□□□□ -1.9
SRL1YOR247W TCB2P48231 1178 aa3.2□□□□□ -1.9
SRL1YOR247W YGL108CP53139 140 aa3.2□□□□□ -1.9
SRL1YOR247W COP1P53622 1201 aaKnown RBP3.2□□□□□ -1.9
SRL1YOR247W YNL234WP53857 426 aa3.2□□□□□ -1.9
SRL1YOR247W HEF3P53978 1044 aaKnown RBP3.2□□□□□ -1.9
SRL1YOR247W PEX25Q02969 394 aa3.2□□□□□ -1.9
SRL1YOR247W ECI1Q05871 280 aa3.2□□□□□ -1.9
SRL1YOR247W SSK1Q07084 712 aa3.2□□□□□ -1.9
SRL1YOR247W YDL218WQ07629 317 aa3.2□□□□□ -1.9
SRL1YOR247W DCI1Q08558 271 aa3.2□□□□□ -1.9
SRL1YOR247W VPS54Q12071 889 aa3.2□□□□□ -1.9
SRL1YOR247W SPE3Q12074 293 aaKnown RBP3.2□□□□□ -1.9
SRL1YOR247W GPM3Q12326 303 aa3.2□□□□□ -1.9
SRL1YOR247W ISN1Q99312 450 aa3.2□□□□□ -1.9
SRL1YOR247W BNR1P40450 1375 aa3.2□□□□□ -1.9
SRL1YOR247W PEP4P07267 405 aaKnown RBP3.19□□□□□ -1.9
SRL1YOR247W PUP2P32379 260 aa3.19□□□□□ -1.9
SRL1YOR247W RPN2P32565 945 aaKnown RBP3.19□□□□□ -1.9
SRL1YOR247W REC114P32841 428 aa3.19□□□□□ -1.9
SRL1YOR247W FLO10P36170 1169 aa3.19□□□□□ -1.9
SRL1YOR247W PIM1P36775 1133 aa3.19□□□□□ -1.9
SRL1YOR247W CBP4P37267 147 aa3.19□□□□□ -1.9
SRL1YOR247W RRT2P38332 387 aa3.19□□□□□ -1.9
SRL1YOR247W ARP1P38696 384 aa3.19□□□□□ -1.9
SRL1YOR247W PHO90P39535 881 aa3.19□□□□□ -1.9
SRL1YOR247W HXT9P40885 567 aa3.19□□□□□ -1.9
SRL1YOR247W YPT11P48559 417 aa3.19□□□□□ -1.9
SRL1YOR247W ATP22P50273 684 aaPredicted RBP3.19□□□□□ -1.9
SRL1YOR247W ALT2P52892 507 aa3.19□□□□□ -1.9
SRL1YOR247W CUL3P53202 744 aa3.19□□□□□ -1.9
SRL1YOR247W ZPR1P53303 486 aaKnown RBP3.19□□□□□ -1.9
SRL1YOR247W SOL4P53315 255 aa3.19□□□□□ -1.9
SRL1YOR247W RSC9Q03124 581 aa3.19□□□□□ -1.9
SRL1YOR247W SIL1Q08199 421 aa3.19□□□□□ -1.9
SRL1YOR247W CFT2Q12102 859 aaPredicted RBP3.19□□□□□ -1.9
SRL1YOR247W NCE102Q12207 173 aaRIP-Chip data3.19□□□□□ -1.9not detected
SRL1YOR247W FRE7Q12333 620 aa3.19□□□□□ -1.9
SRL1YOR247W EDE1P34216 1381 aa3.18□□□□□ -1.9
SRL1YOR247W HIP1P06775 603 aa3.18□□□□□ -1.9
SRL1YOR247W MBR1P23493 339 aa3.18□□□□□ -1.9
SRL1YOR247W BRF1P29056 596 aa3.18□□□□□ -1.9
SRL1YOR247W MCM4P30665 933 aaKnown RBP3.18□□□□□ -1.9
SRL1YOR247W SWH1P35845 1188 aa3.18□□□□□ -1.9
SRL1YOR247W DUG2P38149 878 aa3.18□□□□□ -1.9
SRL1YOR247W TCM62P38228 572 aaKnown RBP3.18□□□□□ -1.9
SRL1YOR247W MMS4P38257 691 aa3.18□□□□□ -1.9
SRL1YOR247W VHC1P38329 1120 aa3.18□□□□□ -1.9
SRL1YOR247W YHR054CP38780 354 aa3.18□□□□□ -1.9
SRL1YOR247W TIF4631P39935 952 aaKnown RBP3.18□□□□□ -1.9
SRL1YOR247W IAH1P41734 238 aa3.18□□□□□ -1.9
SRL1YOR247W POP1P41812 875 aa3.18□□□□□ -1.9
SRL1YOR247W YJR154WP47181 346 aa3.18□□□□□ -1.9
SRL1YOR247W OCA1P50946 238 aaPredicted RBP3.18□□□□□ -1.9
SRL1YOR247W EOS1P53938 366 aa3.18□□□□□ -1.9
SRL1YOR247W LGE1Q02796 332 aaKnown RBP3.18□□□□□ -1.9
SRL1YOR247W YMR130WQ04223 302 aa3.18□□□□□ -1.9
SRL1YOR247W SEG1Q04279 960 aa3.18□□□□□ -1.9
SRL1YOR247W COQ11Q05892 277 aa3.18□□□□□ -1.9
SRL1YOR247W YOR365CQ08844 703 aa3.18□□□□□ -1.9
SRL1YOR247W AEP3Q12089 606 aa3.18□□□□□ -1.9
SRL1YOR247W CRC1Q12289 327 aa3.18□□□□□ -1.9
SRL1YOR247W GAL4P04386 881 aa3.17□□□□□ -1.9
SRL1YOR247W SPO7P18410 259 aa3.17□□□□□ -1.9
SRL1YOR247W SNT1P25357 1226 aa3.17□□□□□ -1.9
SRL1YOR247W YIM1P28625 365 aa3.17□□□□□ -1.9
SRL1YOR247W ANP1P32629 500 aa3.17□□□□□ -1.9
SRL1YOR247W SLM4P38247 162 aa3.17□□□□□ -1.9
SRL1YOR247W YIL024CP40543 189 aa3.17□□□□□ -1.9
SRL1YOR247W VMA13P41807 478 aaKnown RBP3.17□□□□□ -1.9
SRL1YOR247W YGL082WP53155 381 aa3.17□□□□□ -1.9
SRL1YOR247W YGR016WP53209 190 aa3.17□□□□□ -1.9
SRL1YOR247W RPT4P53549 437 aaKnown RBP3.17□□□□□ -1.9
SRL1YOR247W YNL181WP53878 407 aa3.17□□□□□ -1.9
SRL1YOR247W SLG1P54867 378 aa3.17□□□□□ -1.9
SRL1YOR247W RHO4Q00246 291 aa3.17□□□□□ -1.9
SRL1YOR247W ACL4Q03771 387 aa3.17□□□□□ -1.9
SRL1YOR247W HEL2Q05580 639 aaKnown RBP3.17□□□□□ -1.9
SRL1YOR247W GLO2Q05584 274 aa3.17□□□□□ -1.9
SRL1YOR247W ATX2Q12067 313 aa3.17□□□□□ -1.9
SRL1YOR247W RPN5Q12250 445 aaKnown RBP3.17□□□□□ -1.9
SRL1YOR247W ARP6Q12509 438 aa3.17□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 51.5 ms