RNA–Protein interactions for RNA: YNL197C

WHI3, Transcript of RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci, yeastyeast

Gene WHI3, Length 1,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
WHI3YNL197C HCS1P34243 683 aa3.43□□□□□ -1.86
WHI3YNL197C TOM71P38825 639 aaKnown RBP3.43□□□□□ -1.86
WHI3YNL197C YIL024CP40543 189 aa3.43□□□□□ -1.86
WHI3YNL197C BUD27P43573 796 aaKnown RBP RIP-Chip data3.43□□□□□ -1.86not detected
WHI3YNL197C ECM27P47144 725 aa3.43□□□□□ -1.86
WHI3YNL197C YPT11P48559 417 aa3.43□□□□□ -1.86
WHI3YNL197C RHO4Q00246 291 aa3.43□□□□□ -1.86
WHI3YNL197C YPL014WQ02606 381 aa3.43□□□□□ -1.86
WHI3YNL197C DON1Q05610 365 aa3.43□□□□□ -1.86
WHI3YNL197C SIL1Q08199 421 aa3.43□□□□□ -1.86
WHI3YNL197C THP1Q08231 455 aa3.43□□□□□ -1.86
WHI3YNL197C YLR112WQ12130 139 aa3.43□□□□□ -1.86
WHI3YNL197C PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.43□□□□□ -1.86 RIP-Chip
WHI3YNL197C CRC1Q12289 327 aa3.43□□□□□ -1.86
WHI3YNL197C GPM3Q12326 303 aa3.43□□□□□ -1.86
WHI3YNL197C PAR32Q12515 295 aaKnown RBP3.43□□□□□ -1.86
WHI3YNL197C MNE1P24720 663 aa3.43□□□□□ -1.86
WHI3YNL197C RRP7P25368 297 aaPredicted RBP3.43□□□□□ -1.86
WHI3YNL197C PEX2P32800 271 aa3.43□□□□□ -1.86
WHI3YNL197C MSN2P33748 704 aa3.43□□□□□ -1.86
WHI3YNL197C SHP1P34223 423 aa3.43□□□□□ -1.86
WHI3YNL197C YKL023WP36103 277 aaKnown RBP3.43□□□□□ -1.86
WHI3YNL197C RXT2P38255 430 aa3.43□□□□□ -1.86
WHI3YNL197C YGR149WP48236 432 aa3.43□□□□□ -1.86
WHI3YNL197C OGG1P53397 376 aaPredicted RBP3.43□□□□□ -1.86
WHI3YNL197C MCP2Q06567 569 aa3.43□□□□□ -1.86
WHI3YNL197C RAV1P47104 1357 aa3.42□□□□□ -1.86
WHI3YNL197C PEP5P12868 1029 aa3.42□□□□□ -1.86
WHI3YNL197C RPB8P20436 146 aa3.42□□□□□ -1.86
WHI3YNL197C SUI2P20459 304 aaKnown RBP3.42□□□□□ -1.86
WHI3YNL197C VPH1P32563 840 aaKnown RBP3.42□□□□□ -1.86
WHI3YNL197C APE3P37302 537 aaKnown RBP3.42□□□□□ -1.86
WHI3YNL197C ROT2P38138 954 aa3.42□□□□□ -1.86
WHI3YNL197C LAG1P38703 411 aa3.42□□□□□ -1.86
WHI3YNL197C SER3P40054 469 aa3.42□□□□□ -1.86
WHI3YNL197C SMM1P53720 384 aaKnown RBP3.42□□□□□ -1.86
WHI3YNL197C DUG3P53871 357 aa3.42□□□□□ -1.86
WHI3YNL197C LGE1Q02796 332 aaKnown RBP3.42□□□□□ -1.86
WHI3YNL197C CTL1Q03220 320 aaKnown RBP3.42□□□□□ -1.86
WHI3YNL197C EKI1Q03764 534 aa3.42□□□□□ -1.86
WHI3YNL197C ORM2Q06144 216 aa3.42□□□□□ -1.86
WHI3YNL197C MMR1Q06324 491 aa3.42□□□□□ -1.86
WHI3YNL197C SPE3Q12074 293 aaKnown RBP3.42□□□□□ -1.86
WHI3YNL197C NDJ1Q12366 352 aa3.42□□□□□ -1.86
WHI3YNL197C TPM1P17536 199 aaKnown RBP3.42□□□□□ -1.86
WHI3YNL197C ATP11P32453 318 aa3.42□□□□□ -1.86
WHI3YNL197C MDL1P33310 695 aa3.42□□□□□ -1.86
WHI3YNL197C STV1P37296 890 aa3.42□□□□□ -1.86
WHI3YNL197C DUG2P38149 878 aa3.42□□□□□ -1.86
WHI3YNL197C BNA4P38169 460 aa3.42□□□□□ -1.86
WHI3YNL197C SLM4P38247 162 aa3.42□□□□□ -1.86
WHI3YNL197C SYG1P40528 902 aa3.42□□□□□ -1.86
WHI3YNL197C FET5P43561 622 aa3.42□□□□□ -1.86
WHI3YNL197C COS5P47187 383 aa3.42□□□□□ -1.86
WHI3YNL197C SHR3Q02774 210 aa3.42□□□□□ -1.86
WHI3YNL197C ACL4Q03771 387 aa3.42□□□□□ -1.86
WHI3YNL197C COQ11Q05892 277 aa3.42□□□□□ -1.86
WHI3YNL197C POS5Q06892 414 aa3.42□□□□□ -1.86
WHI3YNL197C COS7Q07788 383 aa3.42□□□□□ -1.86
WHI3YNL197C UAF30Q08747 228 aa3.42□□□□□ -1.86
WHI3YNL197C YNL162W-AQ3E7A8 72 aa3.42□□□□□ -1.86
WHI3YNL197C TAD3Q9URQ3 322 aa3.42□□□□□ -1.86
WHI3YNL197C RIP1P08067 215 aa3.41□□□□□ -1.86
WHI3YNL197C BAR1P12630 587 aa3.41□□□□□ -1.86
WHI3YNL197C SEC63P14906 663 aa3.41□□□□□ -1.86
WHI3YNL197C YCP4P25349 247 aaKnown RBP3.41□□□□□ -1.86
WHI3YNL197C TFB1P32776 642 aa3.41□□□□□ -1.86
WHI3YNL197C FLO5P38894 1075 aa3.41□□□□□ -1.86
WHI3YNL197C EFM4P40516 257 aa3.41□□□□□ -1.86
WHI3YNL197C VPS25P47142 202 aa3.41□□□□□ -1.86
WHI3YNL197C YGR016WP53209 190 aa3.41□□□□□ -1.86
WHI3YNL197C ERG13P54839 491 aaKnown RBP3.41□□□□□ -1.86
WHI3YNL197C SEG1Q04279 960 aa3.41□□□□□ -1.86
WHI3YNL197C GYL1Q04322 720 aa3.41□□□□□ -1.86
WHI3YNL197C DIC1Q06143 298 aa3.41□□□□□ -1.86
WHI3YNL197C RDR1Q08904 546 aa3.41□□□□□ -1.86
WHI3YNL197C YPR089WO13585 888 aa3.4□□□□□ -1.86
WHI3YNL197C SPS4P09937 338 aa3.4□□□□□ -1.86
WHI3YNL197C TYR1P20049 452 aa3.4□□□□□ -1.86
WHI3YNL197C AIM17P23180 465 aaKnown RBP3.4□□□□□ -1.86
WHI3YNL197C PPZ1P26570 692 aa3.4□□□□□ -1.86
WHI3YNL197C RAD14P28519 371 aa3.4□□□□□ -1.86
WHI3YNL197C SNC1P31109 117 aa3.4□□□□□ -1.86
WHI3YNL197C AFG1P32317 509 aa3.4□□□□□ -1.86
WHI3YNL197C PUP2P32379 260 aa3.4□□□□□ -1.86
WHI3YNL197C SPC34P36131 295 aa3.4□□□□□ -1.86
WHI3YNL197C RFC3P38629 340 aa3.4□□□□□ -1.86
WHI3YNL197C YER130CP39959 443 aa3.4□□□□□ -1.86
WHI3YNL197C SEC28P40509 296 aaKnown RBP3.4□□□□□ -1.86
WHI3YNL197C ZPR1P53303 486 aaKnown RBP3.4□□□□□ -1.86
WHI3YNL197C RIM13Q03792 727 aa3.4□□□□□ -1.86
WHI3YNL197C RRP45Q05636 305 aaKnown RBP3.4□□□□□ -1.86
WHI3YNL197C MDM30Q05930 598 aa3.4□□□□□ -1.86
WHI3YNL197C YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.4□□□□□ -1.86not detected
WHI3YNL197C RPN5Q12250 445 aaKnown RBP3.4□□□□□ -1.86
WHI3YNL197C HER1Q12276 1246 aa3.4□□□□□ -1.86
WHI3YNL197C RPL42AP0CX27 106 aaKnown RBP3.4□□□□□ -1.87
WHI3YNL197C RPL42BP0CX28 106 aaKnown RBP3.4□□□□□ -1.87
WHI3YNL197C ATP10P18496 279 aa3.4□□□□□ -1.87
WHI3YNL197C GID7P25569 745 aa3.4□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 70.7 ms