RNA–Protein interactions for RNA: YLR421C

RPN13, Transcript of Subunit of the 19S regulatory particle of the 26S proteasome lid, yeastyeast

Gene RPN13, Length 471 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN13YLR421C UBP13P38187 747 aa3.39□□□□□ -1.87
RPN13YLR421C YNG2P38806 282 aaKnown RBP3.39□□□□□ -1.87
RPN13YLR421C PCL6P40038 420 aa3.39□□□□□ -1.87
RPN13YLR421C SLZ1P40167 298 aa3.39□□□□□ -1.87
RPN13YLR421C RGI2P40188 164 aa3.39□□□□□ -1.87
RPN13YLR421C MET18P40469 1032 aa3.39□□□□□ -1.87
RPN13YLR421C MET28P40573 187 aa3.39□□□□□ -1.87
RPN13YLR421C ASE1P50275 885 aa3.39□□□□□ -1.87
RPN13YLR421C TAM41P53230 385 aa3.39□□□□□ -1.87
RPN13YLR421C REG1Q00816 1014 aa3.39□□□□□ -1.87
RPN13YLR421C RRB1Q04225 511 aaKnown RBP3.39□□□□□ -1.87
RPN13YLR421C CSI1Q04368 295 aa3.39□□□□□ -1.87
RPN13YLR421C TAP42Q04372 366 aa3.39□□□□□ -1.87
RPN13YLR421C GTB1Q04924 702 aa3.39□□□□□ -1.87
RPN13YLR421C FMP42Q04991 504 aa3.39□□□□□ -1.87
RPN13YLR421C ENT4Q07872 247 aa3.39□□□□□ -1.87
RPN13YLR421C MCH4Q08268 501 aa3.39□□□□□ -1.87
RPN13YLR421C RCN2Q12044 265 aa3.39□□□□□ -1.87
RPN13YLR421C HUA2Q12134 243 aa3.39□□□□□ -1.87
RPN13YLR421C ATG9Q12142 997 aa3.39□□□□□ -1.87
RPN13YLR421C PMS1P14242 873 aa3.38□□□□□ -1.87
RPN13YLR421C PDE1P22434 369 aa3.38□□□□□ -1.87
RPN13YLR421C ADK2P26364 225 aa3.38□□□□□ -1.87
RPN13YLR421C URK1P27515 501 aa3.38□□□□□ -1.87
RPN13YLR421C LAC1P28496 418 aa3.38□□□□□ -1.87
RPN13YLR421C YJL068CP40363 299 aa3.38□□□□□ -1.87
RPN13YLR421C DSD1P53095 428 aa3.38□□□□□ -1.87
RPN13YLR421C ERO1Q03103 563 aa3.38□□□□□ -1.87
RPN13YLR421C HOT1Q03213 719 aa3.38□□□□□ -1.87
RPN13YLR421C ATG23Q06671 453 aa3.38□□□□□ -1.87
RPN13YLR421C RIX7Q07844 837 aaKnown RBP3.38□□□□□ -1.87
RPN13YLR421C GPN2Q08726 347 aaPredicted RBP3.38□□□□□ -1.87
RPN13YLR421C NUS1Q12063 375 aa3.38□□□□□ -1.87
RPN13YLR421C YBR255C-AQ3E776 120 aa3.38□□□□□ -1.87
RPN13YLR421C RPO41P13433 1351 aaKnown RBP3.38□□□□□ -1.87
RPN13YLR421C COX1P00401 534 aa3.37□□□□□ -1.87
RPN13YLR421C ATP2P00830 511 aaKnown RBP3.37□□□□□ -1.87
RPN13YLR421C ARD1P07347 238 aaPredicted RBP3.37□□□□□ -1.87
RPN13YLR421C YML003WP0CF16 290 aa3.37□□□□□ -1.87
RPN13YLR421C RPO26P20435 155 aa3.37□□□□□ -1.87
RPN13YLR421C MRPS28P21771 286 aa3.37□□□□□ -1.87
RPN13YLR421C LRE1P25579 583 aaKnown RBP3.37□□□□□ -1.87
RPN13YLR421C SWC3P31376 625 aa3.37□□□□□ -1.87
RPN13YLR421C DBF4P32325 704 aa3.37□□□□□ -1.87
RPN13YLR421C YME2P32843 850 aa3.37□□□□□ -1.87
RPN13YLR421C RRP1P35178 278 aaPredicted RBP3.37□□□□□ -1.87
RPN13YLR421C HEL1P36113 551 aa3.37□□□□□ -1.87
RPN13YLR421C ALY1P36117 915 aa3.37□□□□□ -1.87
RPN13YLR421C CST26P38226 397 aa3.37□□□□□ -1.87
RPN13YLR421C CCT6P39079 546 aa3.37□□□□□ -1.87
RPN13YLR421C YEL057CP39983 233 aa3.37□□□□□ -1.87
RPN13YLR421C ASG1P40467 964 aa3.37□□□□□ -1.87
RPN13YLR421C IAH1P41734 238 aa3.37□□□□□ -1.87
RPN13YLR421C ZAP1P47043 880 aa3.37□□□□□ -1.87
RPN13YLR421C YGL242CP53066 181 aa3.37□□□□□ -1.87
RPN13YLR421C INA17Q02888 182 aa3.37□□□□□ -1.87
RPN13YLR421C SPO19Q03029 223 aa3.37□□□□□ -1.87
RPN13YLR421C RAD30Q04049 632 aa3.37□□□□□ -1.87
RPN13YLR421C UBX2Q04228 584 aa3.37□□□□□ -1.87
RPN13YLR421C YLR281CQ05863 155 aa3.37□□□□□ -1.87
RPN13YLR421C SFH1Q06168 426 aa3.37□□□□□ -1.87
RPN13YLR421C PIG1Q06216 648 aa3.37□□□□□ -1.87
RPN13YLR421C TMA16Q08687 178 aa3.37□□□□□ -1.87
RPN13YLR421C PGC1Q08959 321 aa3.37□□□□□ -1.87
RPN13YLR421C APL4Q12028 832 aa3.37□□□□□ -1.87
RPN13YLR421C TIP41Q12199 356 aa3.37□□□□□ -1.87
RPN13YLR421C SPE4Q12455 300 aa3.37□□□□□ -1.87
RPN13YLR421C YJR112W-AQ3E743 109 aa3.37□□□□□ -1.87
RPN13YLR421C DDP1Q99321 188 aaKnown RBP3.37□□□□□ -1.87
RPN13YLR421C SWI1P09547 1314 aa3.37□□□□□ -1.87
RPN13YLR421C YRF1-2P40105 1681 aa3.36□□□□□ -1.87
RPN13YLR421C APC1P53886 1748 aa3.36□□□□□ -1.87
RPN13YLR421C TY1B-NL2Q99337 1749 aaKnown RBP3.36□□□□□ -1.87
RPN13YLR421C RPS19AP07280 144 aaKnown RBP3.36□□□□□ -1.87
RPN13YLR421C RPS19BP07281 144 aaPredicted RBP3.36□□□□□ -1.87
RPN13YLR421C DFR1P07807 211 aaKnown RBP RIP-Chip data3.36□□□□□ -1.87not detected
RPN13YLR421C GPA1P08539 472 aa3.36□□□□□ -1.87
RPN13YLR421C PMR1P13586 950 aa3.36□□□□□ -1.87
RPN13YLR421C CBS1P14066 229 aa3.36□□□□□ -1.87
RPN13YLR421C PRP16P15938 1071 aaPredicted RBP3.36□□□□□ -1.87
RPN13YLR421C YCR006CP25350 157 aa3.36□□□□□ -1.87
RPN13YLR421C PSO2P30620 661 aa3.36□□□□□ -1.87
RPN13YLR421C GCD7P32502 381 aaPredicted RBP3.36□□□□□ -1.87
RPN13YLR421C PCH2P38126 564 aa3.36□□□□□ -1.87
RPN13YLR421C SPT8P38915 602 aa3.36□□□□□ -1.87
RPN13YLR421C SMF1P38925 575 aa3.36□□□□□ -1.87
RPN13YLR421C PES4P39684 611 aa3.36□□□□□ -1.87
RPN13YLR421C SKP2P42843 763 aa3.36□□□□□ -1.87
RPN13YLR421C MAL13P53338 473 aa3.36□□□□□ -1.87
RPN13YLR421C CIK1Q01649 594 aa3.36□□□□□ -1.87
RPN13YLR421C RPT6Q01939 405 aaKnown RBP3.36□□□□□ -1.87
RPN13YLR421C MTG1Q03151 367 aaPredicted RBP3.36□□□□□ -1.87
RPN13YLR421C RMT2Q03305 412 aa3.36□□□□□ -1.87
RPN13YLR421C RBA50Q04418 439 aa3.36□□□□□ -1.87
RPN13YLR421C STE23Q06010 1027 aa3.36□□□□□ -1.87
RPN13YLR421C NDL1Q06568 189 aa3.36□□□□□ -1.87
RPN13YLR421C YEH1Q07804 573 aa3.36□□□□□ -1.87
RPN13YLR421C RLP24Q07915 199 aaKnown RBP3.36□□□□□ -1.87
RPN13YLR421C FRE3Q08905 711 aa3.36□□□□□ -1.87
RPN13YLR421C APL5Q08951 932 aaKnown RBP3.36□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 29.6 ms