RNA–Protein interactions for RNA: YLR411W

CTR3, Transcript of High-affinity copper transporter of the plasma membrane, yeastyeast

Gene CTR3, Length 726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTR3YLR411W SLT2Q00772 484 aa5.32□□□□□ -1.56
CTR3YLR411W RPA49Q01080 415 aaPredicted RBP5.32□□□□□ -1.56
CTR3YLR411W FMN1Q03778 218 aa5.32□□□□□ -1.56
CTR3YLR411W OCA6Q12454 224 aa5.32□□□□□ -1.56
CTR3YLR411W PNO1Q99216 274 aaKnown RBP5.32□□□□□ -1.56
CTR3YLR411W BI2P03873 423 aa5.31□□□□□ -1.56
CTR3YLR411W MIS1P09440 975 aaKnown RBP5.31□□□□□ -1.56
CTR3YLR411W SAM2P19358 384 aaKnown RBP5.31□□□□□ -1.56
CTR3YLR411W PDE1P22434 369 aa5.31□□□□□ -1.56
CTR3YLR411W RAD51P25454 400 aa5.31□□□□□ -1.56
CTR3YLR411W BEM3P32873 1128 aa5.31□□□□□ -1.56
CTR3YLR411W RFC3P38629 340 aa5.31□□□□□ -1.56
CTR3YLR411W ERC1P38767 581 aa5.31□□□□□ -1.56
CTR3YLR411W XBP1P40489 647 aa5.31□□□□□ -1.56
CTR3YLR411W PHO86P46956 311 aa5.31□□□□□ -1.56
CTR3YLR411W SHE10P53075 577 aa5.31□□□□□ -1.56
CTR3YLR411W LIF1P53150 421 aa5.31□□□□□ -1.56
CTR3YLR411W ATG21Q02887 496 aa5.31□□□□□ -1.56
CTR3YLR411W INP2Q03824 705 aa5.31□□□□□ -1.56
CTR3YLR411W SXM1Q04175 944 aaKnown RBP5.31□□□□□ -1.56
CTR3YLR411W YDR222WQ04925 415 aa5.31□□□□□ -1.56
CTR3YLR411W RAD34Q06665 692 aa5.31□□□□□ -1.56
CTR3YLR411W GPM3Q12326 303 aa5.31□□□□□ -1.56
CTR3YLR411W HKR1P41809 1802 aa5.31□□□□□ -1.56
CTR3YLR411W ILS1P09436 1072 aaKnown RBP5.3□□□□□ -1.56
CTR3YLR411W NAT1P12945 854 aaKnown RBP5.3□□□□□ -1.56
CTR3YLR411W CBF1P17106 351 aa5.3□□□□□ -1.56
CTR3YLR411W PHO81P17442 1178 aa5.3□□□□□ -1.56
CTR3YLR411W EXO70P19658 623 aa5.3□□□□□ -1.56
CTR3YLR411W REC107P21651 314 aa5.3□□□□□ -1.56
CTR3YLR411W ARP2P32381 391 aaKnown RBP5.3□□□□□ -1.56
CTR3YLR411W CSG2P35206 410 aa5.3□□□□□ -1.56
CTR3YLR411W RPF2P36160 344 aaKnown RBP5.3□□□□□ -1.56
CTR3YLR411W YBL028CP38202 106 aa5.3□□□□□ -1.56
CTR3YLR411W VBA2P38358 474 aaKnown RBP5.3□□□□□ -1.56
CTR3YLR411W ACA1P39970 489 aa5.3□□□□□ -1.56
CTR3YLR411W RPT2P40327 437 aaKnown RBP5.3□□□□□ -1.56
CTR3YLR411W LYS4P49367 693 aaPredicted RBP5.3□□□□□ -1.56
CTR3YLR411W KTR5P53966 522 aaPredicted RBP5.3□□□□□ -1.56
CTR3YLR411W HOT1Q03213 719 aa5.3□□□□□ -1.56
CTR3YLR411W IVY1Q04934 453 aa5.3□□□□□ -1.56
CTR3YLR411W CIR2Q08822 631 aa5.3□□□□□ -1.56
CTR3YLR411W YPL191CQ08930 360 aa5.3□□□□□ -1.56
CTR3YLR411W SUL2Q12325 893 aa5.3□□□□□ -1.56
CTR3YLR411W GIS3Q12418 502 aa5.3□□□□□ -1.56
CTR3YLR411W EST1P17214 699 aaPredicted RBP5.29□□□□□ -1.56
CTR3YLR411W URA4P20051 364 aa5.29□□□□□ -1.56
CTR3YLR411W MAK32P23060 363 aa5.29□□□□□ -1.56
CTR3YLR411W SPS22P25380 463 aa5.29□□□□□ -1.56
CTR3YLR411W DPH5P32469 300 aaPredicted RBP5.29□□□□□ -1.56
CTR3YLR411W EFB1P32471 206 aaKnown RBP5.29□□□□□ -1.56
CTR3YLR411W MUD1P32605 298 aaKnown RBP5.29□□□□□ -1.56
CTR3YLR411W COT1P32798 439 aa5.29□□□□□ -1.56
CTR3YLR411W YBR138CP38277 524 aa5.29□□□□□ -1.56
CTR3YLR411W MSR1P38714 643 aa5.29□□□□□ -1.56
CTR3YLR411W PUG1P40100 303 aa5.29□□□□□ -1.56
CTR3YLR411W TMA108P40462 946 aa5.29□□□□□ -1.56
CTR3YLR411W ULP2P40537 1034 aaPredicted RBP5.29□□□□□ -1.56
CTR3YLR411W DIM1P41819 318 aaKnown RBP5.29□□□□□ -1.56
CTR3YLR411W YML6P51998 286 aa5.29□□□□□ -1.56
CTR3YLR411W TAM41P53230 385 aa5.29□□□□□ -1.56
CTR3YLR411W COS6P53344 381 aa5.29□□□□□ -1.56
CTR3YLR411W YNL247WP53852 767 aaKnown RBP5.29□□□□□ -1.56
CTR3YLR411W ARK1P53974 638 aa5.29□□□□□ -1.56
CTR3YLR411W AAT1Q01802 451 aa5.29□□□□□ -1.56
CTR3YLR411W PPM1Q04081 328 aa5.29□□□□□ -1.56
CTR3YLR411W PRM6Q04705 352 aa5.29□□□□□ -1.56
CTR3YLR411W ATG17Q06410 417 aa5.29□□□□□ -1.56
CTR3YLR411W TPO3Q06451 622 aa5.29□□□□□ -1.56
CTR3YLR411W MEU1Q07938 337 aaKnown RBP RIP-Chip data5.29□□□□□ -1.56not detected
CTR3YLR411W SPE4Q12455 300 aa5.29□□□□□ -1.56
CTR3YLR411W RRP36Q12481 300 aaPredicted RBP5.29□□□□□ -1.56
CTR3YLR411W NOT5Q12514 560 aaPredicted RBP5.29□□□□□ -1.56
CTR3YLR411W APA1P16550 321 aaKnown RBP5.28□□□□□ -1.56
CTR3YLR411W URE2P23202 354 aaKnown RBP5.28□□□□□ -1.56
CTR3YLR411W TPS2P31688 896 aaKnown RBP5.28□□□□□ -1.56
CTR3YLR411W CBF2P32504 956 aa5.28□□□□□ -1.56
CTR3YLR411W SIP1P32578 815 aa5.28□□□□□ -1.56
CTR3YLR411W IMD2P38697 523 aaKnown RBP5.28□□□□□ -1.56
CTR3YLR411W FSH1P38777 243 aaKnown RBP5.28□□□□□ -1.56
CTR3YLR411W GCN20P43535 752 aaKnown RBP5.28□□□□□ -1.56
CTR3YLR411W ARC1P46672 376 aaKnown RBP5.28□□□□□ -1.56
CTR3YLR411W IMD3P50095 523 aaKnown RBP5.28□□□□□ -1.56
CTR3YLR411W HOP2P53187 214 aa5.28□□□□□ -1.56
CTR3YLR411W ASI1P54074 624 aa5.28□□□□□ -1.56
CTR3YLR411W YAT1P80235 687 aa5.28□□□□□ -1.56
CTR3YLR411W YPL071CQ02864 156 aa5.28□□□□□ -1.56
CTR3YLR411W RSC9Q03124 581 aa5.28□□□□□ -1.56
CTR3YLR411W SUE1Q06524 206 aa5.28□□□□□ -1.56
CTR3YLR411W GET4Q12125 312 aa5.28□□□□□ -1.56
CTR3YLR411W YDR018CQ12185 396 aa5.28□□□□□ -1.56
CTR3YLR411W CET1O13297 549 aaPredicted RBP5.27□□□□□ -1.57
CTR3YLR411W PET122P10355 254 aa5.27□□□□□ -1.57
CTR3YLR411W TYR1P20049 452 aa5.27□□□□□ -1.57
CTR3YLR411W PTP1P25044 335 aa5.27□□□□□ -1.57
CTR3YLR411W URK1P27515 501 aa5.27□□□□□ -1.57
CTR3YLR411W DUG2P38149 878 aa5.27□□□□□ -1.57
CTR3YLR411W PHO88P38264 188 aaPredicted RBP5.27□□□□□ -1.57
CTR3YLR411W FTH1P38310 465 aa5.27□□□□□ -1.57
CTR3YLR411W TSC10P38342 320 aa5.27□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms