RNA–Protein interactions for RNA: YLR397C

AFG2, Transcript of ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex, yeast

Gene AFG2, Length 2,343 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
AFG2	YLR397C	RPN5	Q12250	445 aa	Known RBP	7.21	□□□□□ -1.26
AFG2	YLR397C	GCR1	P07261	785 aa		7.21	□□□□□ -1.26
AFG2	YLR397C	CAR2	P07991	424 aa	Known RBP	7.21	□□□□□ -1.26
AFG2	YLR397C	MGT1	P26188	188 aa		7.21	□□□□□ -1.26
AFG2	YLR397C	CAM1	P29547	415 aa	Known RBP	7.21	□□□□□ -1.26
AFG2	YLR397C	ARO7	P32178	256 aa		7.21	□□□□□ -1.26
AFG2	YLR397C	ATP11	P32453	318 aa		7.21	□□□□□ -1.26
AFG2	YLR397C	SPO23	P33757	523 aa		7.21	□□□□□ -1.26
AFG2	YLR397C	WHI3	P34761	661 aa	Known RBP	7.21	□□□□□ -1.26
AFG2	YLR397C	BDF1	P35817	686 aa		7.21	□□□□□ -1.26
AFG2	YLR397C	RRT2	P38332	387 aa		7.21	□□□□□ -1.26
AFG2	YLR397C	NVJ1	P38881	321 aa		7.21	□□□□□ -1.26
AFG2	YLR397C	MNN1	P39106	762 aa		7.21	□□□□□ -1.26
AFG2	YLR397C	LSB6	P42951	607 aa		7.21	□□□□□ -1.26
AFG2	YLR397C	SPO74	P45819	413 aa		7.21	□□□□□ -1.26
AFG2	YLR397C	YBP2	P53169	641 aa		7.21	□□□□□ -1.26
AFG2	YLR397C	JAC1	P53193	184 aa		7.21	□□□□□ -1.26
AFG2	YLR397C	ACE2	P21192	770 aa		7.2	□□□□□ -1.26
AFG2	YLR397C	IFM1	P25038	676 aa		7.2	□□□□□ -1.26
AFG2	YLR397C	UBC8	P28263	218 aa		7.2	□□□□□ -1.26
AFG2	YLR397C	END3	P39013	349 aa		7.2	□□□□□ -1.26
AFG2	YLR397C	ECM10	P39987	644 aa		7.2	□□□□□ -1.26
AFG2	YLR397C	FMP52	P40008	231 aa		7.2	□□□□□ -1.26
AFG2	YLR397C	RGI2	P40188	164 aa		7.2	□□□□□ -1.26
AFG2	YLR397C	DOT5	P40553	215 aa		7.2	□□□□□ -1.26
AFG2	YLR397C	YJR056C	P47115	236 aa		7.2	□□□□□ -1.26
AFG2	YLR397C	PAC10	P48363	199 aa		7.2	□□□□□ -1.26
AFG2	YLR397C	MNN10	P50108	393 aa	Known RBP	7.2	□□□□□ -1.26
AFG2	YLR397C	PMT5	P52867	743 aa		7.2	□□□□□ -1.26
AFG2	YLR397C	RET3	P53600	189 aa		7.2	□□□□□ -1.26
AFG2	YLR397C	NOG2	P53742	486 aa	Known RBP	7.2	□□□□□ -1.26
AFG2	YLR397C	SAM50	P53969	484 aa		7.2	□□□□□ -1.26
AFG2	YLR397C	YMR265C	Q03508	461 aa	Known RBP	7.2	□□□□□ -1.26
AFG2	YLR397C	SEN15	Q04675	128 aa		7.2	□□□□□ -1.26
AFG2	YLR397C	RTT103	Q05543	409 aa		7.2	□□□□□ -1.26
AFG2	YLR397C	YLR283W	Q05867	314 aa		7.2	□□□□□ -1.26
AFG2	YLR397C	EST2	Q06163	884 aa		7.2	□□□□□ -1.26
AFG2	YLR397C	YPR1	Q12458	312 aa		7.2	□□□□□ -1.26
AFG2	YLR397C	FOB1	O13329	566 aa		7.19	□□□□□ -1.26
AFG2	YLR397C	AAC1	P04710	309 aa		7.19	□□□□□ -1.26
AFG2	YLR397C	ARG80	P07249	177 aa		7.19	□□□□□ -1.26
AFG2	YLR397C	PHO8	P11491	566 aa		7.19	□□□□□ -1.26
AFG2	YLR397C	YIM1	P28625	365 aa		7.19	□□□□□ -1.26
AFG2	YLR397C	VMA5	P31412	392 aa	Known RBP	7.19	□□□□□ -1.26
AFG2	YLR397C	UGA4	P32837	571 aa		7.19	□□□□□ -1.26
AFG2	YLR397C	CBT1	P36038	271 aa	Predicted RBP	7.19	□□□□□ -1.26
AFG2	YLR397C	THI11	P47183	340 aa		7.19	□□□□□ -1.26
AFG2	YLR397C	RTA1	P53047	317 aa		7.19	□□□□□ -1.26
AFG2	YLR397C	YGR021W	P53212	290 aa		7.19	□□□□□ -1.26
AFG2	YLR397C	PBP1	P53297	722 aa	Known RBP	7.19	□□□□□ -1.26
AFG2	YLR397C	AAD15	Q08361	143 aa		7.19	□□□□□ -1.26
AFG2	YLR397C	PEX27	Q08580	376 aa		7.19	□□□□□ -1.26
AFG2	YLR397C	YBL029C-A	Q3E756	94 aa		7.19	□□□□□ -1.26
AFG2	YLR397C	YMR084W	A2P2R3	262 aa		7.19	□□□□□ -1.26
AFG2	YLR397C	MRP1	P10662	321 aa	Known RBP	7.19	□□□□□ -1.26
AFG2	YLR397C	HOM2	P13663	365 aa	Known RBP	7.19	□□□□□ -1.26
AFG2	YLR397C	THI4	P32318	326 aa		7.19	□□□□□ -1.26
AFG2	YLR397C	DAL3	P32459	195 aa		7.19	□□□□□ -1.26
AFG2	YLR397C	DPH2	P32461	534 aa		7.19	□□□□□ -1.26
AFG2	YLR397C	GSH1	P32477	678 aa		7.19	□□□□□ -1.26
AFG2	YLR397C	CAF4	P36130	643 aa		7.19	□□□□□ -1.26
AFG2	YLR397C	PLB1	P39105	664 aa		7.19	□□□□□ -1.26
AFG2	YLR397C	FAU1	P40099	211 aa		7.19	□□□□□ -1.26
AFG2	YLR397C	YIL166C	P40445	542 aa		7.19	□□□□□ -1.26
AFG2	YLR397C	PFA3	P42836	336 aa		7.19	□□□□□ -1.26
AFG2	YLR397C	YDR090C	Q03193	310 aa		7.19	□□□□□ -1.26
AFG2	YLR397C	ENT5	Q03769	411 aa	Known RBP	7.19	□□□□□ -1.26
AFG2	YLR397C	YLR173W	Q06247	608 aa		7.19	□□□□□ -1.26
AFG2	YLR397C	RPL25	P04456	142 aa	Known RBP	7.18	□□□□□ -1.26
AFG2	YLR397C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	7.18	□□□□□ -1.26	not detected
AFG2	YLR397C	CDC20	P26309	610 aa		7.18	□□□□□ -1.26
AFG2	YLR397C	SPR1	P32603	445 aa		7.18	□□□□□ -1.26
AFG2	YLR397C	PGM1	P33401	570 aa	Known RBP	7.18	□□□□□ -1.26
AFG2	YLR397C	MTC2	P34246	357 aa		7.18	□□□□□ -1.26
AFG2	YLR397C	PRM9	P39551	298 aa		7.18	□□□□□ -1.26
AFG2	YLR397C	FLC2	P39719	783 aa		7.18	□□□□□ -1.26
AFG2	YLR397C	AIM10	P39965	576 aa	Known RBP	7.18	□□□□□ -1.26
AFG2	YLR397C	BIM1	P40013	344 aa		7.18	□□□□□ -1.26
AFG2	YLR397C	UTP25	P40498	721 aa	Known RBP	7.18	□□□□□ -1.26
AFG2	YLR397C	REF2	P42073	533 aa	Predicted RBP	7.18	□□□□□ -1.26
AFG2	YLR397C	NSE4	P43124	402 aa		7.18	□□□□□ -1.26
AFG2	YLR397C	SLD3	P53135	668 aa		7.18	□□□□□ -1.26
AFG2	YLR397C	RNH70	P53331	553 aa		7.18	□□□□□ -1.26
AFG2	YLR397C	YAF9	P53930	226 aa		7.18	□□□□□ -1.26
AFG2	YLR397C	RRN5	Q02983	363 aa		7.18	□□□□□ -1.26
AFG2	YLR397C	TPP1	Q03796	238 aa		7.18	□□□□□ -1.26
AFG2	YLR397C	MUS81	Q04149	632 aa	Predicted RBP	7.18	□□□□□ -1.26
AFG2	YLR397C	ECM38	Q05902	660 aa	Predicted RBP	7.18	□□□□□ -1.26
AFG2	YLR397C	YPR091C	Q06833	770 aa		7.18	□□□□□ -1.26
AFG2	YLR397C	TYW1	Q08960	810 aa	Known RBP	7.18	□□□□□ -1.26
AFG2	YLR397C	NBL1	Q3E7Y6	73 aa		7.18	□□□□□ -1.26
AFG2	YLR397C	COB	P00163	385 aa		7.18	□□□□□ -1.26
AFG2	YLR397C	MET16	P18408	261 aa	Predicted RBP	7.18	□□□□□ -1.26
AFG2	YLR397C	COX11	P19516	300 aa	Known RBP	7.18	□□□□□ -1.26
AFG2	YLR397C	RAM1	P22007	431 aa		7.18	□□□□□ -1.26
AFG2	YLR397C	PAH1	P32567	862 aa		7.18	□□□□□ -1.26
AFG2	YLR397C	SIP1	P32578	815 aa		7.18	□□□□□ -1.26
AFG2	YLR397C	MDL2	P33311	773 aa		7.18	□□□□□ -1.26
AFG2	YLR397C	RER2	P35196	286 aa		7.18	□□□□□ -1.26
AFG2	YLR397C	HIS2	P38635	335 aa		7.18	□□□□□ -1.26

Retrieved 100 of 5,963 RNA–protein pairs in 30.4 ms