RNA–Protein interactions for RNA: YLR062C

BUD28, Transcript of Dubious open reading frame, yeast

Gene BUD28, Length 378 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BUD28	YLR062C	MCD1	Q12158	566 aa		4.91	□□□□□ -1.62
BUD28	YLR062C	YOL107W	Q12239	342 aa		4.91	□□□□□ -1.62
BUD28	YLR062C	YLR111W	Q12528	110 aa		4.91	□□□□□ -1.62
BUD28	YLR062C	RGS2	Q99188	309 aa		4.91	□□□□□ -1.62
BUD28	YLR062C	SSC1	P0CS90	654 aa	Known RBP	4.9	□□□□□ -1.63
BUD28	YLR062C	RPS4A	P0CX35	261 aa	Known RBP	4.9	□□□□□ -1.63
BUD28	YLR062C	RPS4B	P0CX36	261 aa	Known RBP	4.9	□□□□□ -1.63
BUD28	YLR062C	PRP2	P20095	876 aa	Predicted RBP	4.9	□□□□□ -1.63
BUD28	YLR062C	SFC1	P33303	322 aa		4.9	□□□□□ -1.63
BUD28	YLR062C	SKT5	P34226	696 aa		4.9	□□□□□ -1.63
BUD28	YLR062C	GLY1	P37303	387 aa	Known RBP	4.9	□□□□□ -1.63
BUD28	YLR062C	INM1	P38710	295 aa		4.9	□□□□□ -1.63
BUD28	YLR062C	SPC97	P38863	823 aa		4.9	□□□□□ -1.63
BUD28	YLR062C	SSP120	P39931	234 aa	Known RBP	4.9	□□□□□ -1.63
BUD28	YLR062C	CEP3	P40969	608 aa		4.9	□□□□□ -1.63
BUD28	YLR062C	YJR149W	P47177	404 aa		4.9	□□□□□ -1.63
BUD28	YLR062C	ERG26	P53199	349 aa	Known RBP	4.9	□□□□□ -1.63
BUD28	YLR062C	LSC1	P53598	329 aa	Known RBP	4.9	□□□□□ -1.63
BUD28	YLR062C	RNY1	Q02933	434 aa	Known RBP	4.9	□□□□□ -1.63
BUD28	YLR062C	NHP10	Q03435	203 aa		4.9	□□□□□ -1.63
BUD28	YLR062C	YMR209C	Q03648	457 aa		4.9	□□□□□ -1.63
BUD28	YLR062C	TAF12	Q03761	539 aa		4.9	□□□□□ -1.63
BUD28	YLR062C	CSN9	Q03981	162 aa		4.9	□□□□□ -1.63
BUD28	YLR062C	HPT1	Q04178	221 aa	Known RBP	4.9	□□□□□ -1.63
BUD28	YLR062C	RRN11	Q04712	507 aa		4.9	□□□□□ -1.63
BUD28	YLR062C	BCH1	Q05029	724 aa		4.9	□□□□□ -1.63
BUD28	YLR062C	YMR034C	Q05131	434 aa	Predicted RBP	4.9	□□□□□ -1.63
BUD28	YLR062C	MDY2	Q12285	212 aa		4.9	□□□□□ -1.63
BUD28	YLR062C	YPL247C	Q12523	523 aa		4.9	□□□□□ -1.63
BUD28	YLR062C	FAS1	P07149	2051 aa	Known RBP	4.89	□□□□□ -1.63
BUD28	YLR062C	STE3	P06783	470 aa		4.89	□□□□□ -1.63
BUD28	YLR062C	LAT1	P12695	482 aa	Known RBP	4.89	□□□□□ -1.63
BUD28	YLR062C	RSR1	P13856	272 aa		4.89	□□□□□ -1.63
BUD28	YLR062C	CMP2	P14747	604 aa		4.89	□□□□□ -1.63
BUD28	YLR062C	RPB4	P20433	221 aa	Predicted RBP	4.89	□□□□□ -1.63
BUD28	YLR062C	BUB3	P26449	341 aa		4.89	□□□□□ -1.63
BUD28	YLR062C	MLF3	P32047	452 aa		4.89	□□□□□ -1.63
BUD28	YLR062C	PET112	P33893	541 aa		4.89	□□□□□ -1.63
BUD28	YLR062C	SET3	P36124	751 aa		4.89	□□□□□ -1.63
BUD28	YLR062C	REV7	P38927	245 aa		4.89	□□□□□ -1.63
BUD28	YLR062C	NDE1	P40215	560 aa		4.89	□□□□□ -1.63
BUD28	YLR062C	YJR030C	P47101	745 aa		4.89	□□□□□ -1.63
BUD28	YLR062C	URB2	P47108	1174 aa		4.89	□□□□□ -1.63
BUD28	YLR062C	PRP31	P49704	494 aa	Predicted RBP	4.89	□□□□□ -1.63
BUD28	YLR062C	MDM34	P53083	459 aa		4.89	□□□□□ -1.63
BUD28	YLR062C	FHN1	P53279	174 aa		4.89	□□□□□ -1.63
BUD28	YLR062C	BIO4	P53630	237 aa		4.89	□□□□□ -1.63
BUD28	YLR062C	ESF2	P53743	316 aa	Known RBP	4.89	□□□□□ -1.63
BUD28	YLR062C	MTQ2	Q03920	221 aa	Predicted RBP	4.89	□□□□□ -1.63
BUD28	YLR062C	SIZ1	Q04195	904 aa		4.89	□□□□□ -1.63
BUD28	YLR062C	TAF11	Q04226	346 aa		4.89	□□□□□ -1.63
BUD28	YLR062C	VAM6	Q07468	1049 aa		4.89	□□□□□ -1.63
BUD28	YLR062C	YOR389W	Q08912	624 aa		4.89	□□□□□ -1.63
BUD28	YLR062C	YPL278C	Q08990	100 aa		4.89	□□□□□ -1.63
BUD28	YLR062C	YDR056C	Q12025	205 aa		4.89	□□□□□ -1.63
BUD28	YLR062C	ATG29	Q12092	213 aa		4.89	□□□□□ -1.63
BUD28	YLR062C	CHS5	Q12114	671 aa	Known RBP	4.89	□□□□□ -1.63
BUD28	YLR062C	RRP42	Q12277	265 aa	Predicted RBP	4.89	□□□□□ -1.63
BUD28	YLR062C	FRE7	Q12333	620 aa		4.89	□□□□□ -1.63
BUD28	YLR062C	LAG2	Q92325	660 aa		4.89	□□□□□ -1.63
BUD28	YLR062C	KIN2	P13186	1147 aa	Known RBP	4.88	□□□□□ -1.63
BUD28	YLR062C	TYR1	P20049	452 aa		4.88	□□□□□ -1.63
BUD28	YLR062C	IMG1	P25626	169 aa		4.88	□□□□□ -1.63
BUD28	YLR062C	SFA1	P32771	386 aa		4.88	□□□□□ -1.63
BUD28	YLR062C	NFU1	P32860	256 aa		4.88	□□□□□ -1.63
BUD28	YLR062C	SDH3	P33421	198 aa		4.88	□□□□□ -1.63
BUD28	YLR062C	YKL100C	P34248	587 aa		4.88	□□□□□ -1.63
BUD28	YLR062C	NUP120	P35729	1037 aa		4.88	□□□□□ -1.63
BUD28	YLR062C	ASK1	P35734	292 aa		4.88	□□□□□ -1.63
BUD28	YLR062C	RRP14	P36080	434 aa	Known RBP	4.88	□□□□□ -1.63
BUD28	YLR062C	AXL2	P38928	823 aa		4.88	□□□□□ -1.63
BUD28	YLR062C	GGC1	P38988	300 aa		4.88	□□□□□ -1.63
BUD28	YLR062C	BEM4	P39011	633 aa		4.88	□□□□□ -1.63
BUD28	YLR062C	DHH1	P39517	506 aa	Known RBP	4.88	□□□□□ -1.63
BUD28	YLR062C	YJL206C	P39529	758 aa		4.88	□□□□□ -1.63
BUD28	YLR062C	EMP65	P40085	556 aa		4.88	□□□□□ -1.63
BUD28	YLR062C	PEP8	P40335	379 aa		4.88	□□□□□ -1.63
BUD28	YLR062C	SHY1	P53266	389 aa		4.88	□□□□□ -1.63
BUD28	YLR062C	CSL4	P53859	292 aa	Predicted RBP	4.88	□□□□□ -1.63
BUD28	YLR062C	RSM10	Q03201	203 aa		4.88	□□□□□ -1.63
BUD28	YLR062C	USA1	Q03714	838 aa		4.88	□□□□□ -1.63
BUD28	YLR062C	TRS23	Q03784	219 aa		4.88	□□□□□ -1.63
BUD28	YLR062C	VHS1	Q03785	461 aa		4.88	□□□□□ -1.63
BUD28	YLR062C	IRC13	Q08630	104 aa		4.88	□□□□□ -1.63
BUD28	YLR062C	LEU9	Q12166	604 aa	Known RBP	4.88	□□□□□ -1.63
BUD28	YLR062C	HAL9	Q12180	1030 aa		4.88	□□□□□ -1.63
BUD28	YLR062C	YOR114W	Q12219	294 aa		4.88	□□□□□ -1.63
BUD28	YLR062C	TY1A-BL	Q12266	440 aa		4.88	□□□□□ -1.63
BUD28	YLR062C	GLE1	Q12315	538 aa		4.88	□□□□□ -1.63
BUD28	YLR062C	ARG4	P04076	463 aa	Predicted RBP	4.87	□□□□□ -1.63
BUD28	YLR062C	HEM2	P05373	342 aa		4.87	□□□□□ -1.63
BUD28	YLR062C	ILV6	P25605	309 aa	Known RBP	4.87	□□□□□ -1.63
BUD28	YLR062C	YCR090C	P25654	182 aa	Known RBP	4.87	□□□□□ -1.63
BUD28	YLR062C	CRM1	P30822	1084 aa	Known RBP	4.87	□□□□□ -1.63
BUD28	YLR062C	PRO1	P32264	428 aa		4.87	□□□□□ -1.63
BUD28	YLR062C	PHA2	P32452	334 aa		4.87	□□□□□ -1.63
BUD28	YLR062C	ISC10	P32645	267 aa		4.87	□□□□□ -1.63
BUD28	YLR062C	KKQ8	P36004	724 aa		4.87	□□□□□ -1.63
BUD28	YLR062C	OSH7	P38755	437 aa		4.87	□□□□□ -1.63
BUD28	YLR062C	YER034W	P40022	185 aa	Known RBP	4.87	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms