RNA–Protein interactions for RNA: YLR055C

SPT8, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT8, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT8YLR055C GRX8Q05926 109 aa10.85□□□□□ -0.67
SPT8YLR055C TRE2Q08693 809 aa10.85□□□□□ -0.67
SPT8YLR055C PAT1P25644 796 aaKnown RBP10.84□□□□□ -0.67
SPT8YLR055C MEI5P32489 222 aa10.84□□□□□ -0.67
SPT8YLR055C STE14P32584 239 aa10.84□□□□□ -0.67
SPT8YLR055C POL12P38121 705 aaPredicted RBP10.84□□□□□ -0.67
SPT8YLR055C YIR007WP40566 764 aa10.84□□□□□ -0.67
SPT8YLR055C SNG1P46950 547 aa10.84□□□□□ -0.67
SPT8YLR055C MTR3P48240 250 aaPredicted RBP10.84□□□□□ -0.67
SPT8YLR055C MRX6P48564 524 aa10.84□□□□□ -0.67
SPT8YLR055C CLD1P53264 445 aa10.84□□□□□ -0.67
SPT8YLR055C TIM13P53299 105 aa10.84□□□□□ -0.67
SPT8YLR055C COG5P53951 403 aa10.84□□□□□ -0.67
SPT8YLR055C NHP10Q03435 203 aa10.84□□□□□ -0.67
SPT8YLR055C RPN4Q03465 531 aa10.84□□□□□ -0.67
SPT8YLR055C YHM2Q04013 314 aa10.84□□□□□ -0.67
SPT8YLR055C RPN9Q04062 393 aaKnown RBP10.84□□□□□ -0.67
SPT8YLR055C RTN1Q04947 295 aaKnown RBP10.84□□□□□ -0.67
SPT8YLR055C RIF2Q06208 395 aa10.84□□□□□ -0.67
SPT8YLR055C YPQ2Q06328 317 aa10.84□□□□□ -0.67
SPT8YLR055C BRE4Q07660 1125 aa10.84□□□□□ -0.67
SPT8YLR055C UAF30Q08747 228 aa10.84□□□□□ -0.67
SPT8YLR055C MED2Q12124 431 aa10.84□□□□□ -0.67
SPT8YLR055C PDH1Q12428 516 aaKnown RBP10.84□□□□□ -0.67
SPT8YLR055C PUT2P07275 575 aa10.84□□□□□ -0.67
SPT8YLR055C COS2P0CX12 379 aa10.84□□□□□ -0.67
SPT8YLR055C COS3P0CX13 379 aa10.84□□□□□ -0.67
SPT8YLR055C YAP1P19880 650 aaKnown RBP10.84□□□□□ -0.67
SPT8YLR055C SGF29P25554 259 aa10.84□□□□□ -0.67
SPT8YLR055C NTG1P31378 399 aa10.84□□□□□ -0.67
SPT8YLR055C GDH2P33327 1092 aaKnown RBP10.84□□□□□ -0.67
SPT8YLR055C SKT5P34226 696 aa10.84□□□□□ -0.67
SPT8YLR055C MED6P38782 295 aa10.84□□□□□ -0.67
SPT8YLR055C SLX8P40072 274 aa10.84□□□□□ -0.67
SPT8YLR055C COS4P43542 379 aa10.84□□□□□ -0.67
SPT8YLR055C UPF3P48412 387 aaKnown RBP10.84□□□□□ -0.67
SPT8YLR055C YDR109CQ04585 715 aa10.84□□□□□ -0.67
SPT8YLR055C ARG81P05085 880 aa10.83□□□□□ -0.68
SPT8YLR055C SEC53P07283 254 aaKnown RBP10.83□□□□□ -0.68
SPT8YLR055C AAT2P23542 418 aaKnown RBP10.83□□□□□ -0.68
SPT8YLR055C ACH1P32316 526 aa10.83□□□□□ -0.68
SPT8YLR055C PRP21P32524 280 aaPredicted RBP10.83□□□□□ -0.68
SPT8YLR055C VAC8P39968 578 aa10.83□□□□□ -0.68
SPT8YLR055C ELO3P40319 345 aa10.83□□□□□ -0.68
SPT8YLR055C GCD10P41814 478 aa10.83□□□□□ -0.68
SPT8YLR055C ARH1P48360 493 aa10.83□□□□□ -0.68
SPT8YLR055C ARP10Q04549 284 aa10.83□□□□□ -0.68
SPT8YLR055C APC4Q04601 652 aa10.83□□□□□ -0.68
SPT8YLR055C COA4Q05809 96 aa10.83□□□□□ -0.68
SPT8YLR055C BLS1Q06071 122 aa10.83□□□□□ -0.68
SPT8YLR055C GPH1P06738 902 aaKnown RBP10.82□□□□□ -0.68
SPT8YLR055C RAD7P06779 565 aa10.82□□□□□ -0.68
SPT8YLR055C EMC1P25574 760 aa10.82□□□□□ -0.68
SPT8YLR055C COX13P32799 129 aa10.82□□□□□ -0.68
SPT8YLR055C JLP2P40206 208 aa10.82□□□□□ -0.68
SPT8YLR055C UTP18P40362 594 aaPredicted RBP10.82□□□□□ -0.68
SPT8YLR055C IMD3P50095 523 aaKnown RBP10.82□□□□□ -0.68
SPT8YLR055C ATP22P50273 684 aaPredicted RBP10.82□□□□□ -0.68
SPT8YLR055C TWF1P53250 332 aa10.82□□□□□ -0.68
SPT8YLR055C YNR068CP53754 272 aa10.82□□□□□ -0.68
SPT8YLR055C CDC14Q00684 551 aa10.82□□□□□ -0.68
SPT8YLR055C PET117Q02771 107 aa10.82□□□□□ -0.68
SPT8YLR055C SPO20Q04359 397 aa10.82□□□□□ -0.68
SPT8YLR055C YLR012CQ07927 99 aa10.82□□□□□ -0.68
SPT8YLR055C NUS1Q12063 375 aa10.82□□□□□ -0.68
SPT8YLR055C AFI1Q99222 893 aa10.82□□□□□ -0.68
SPT8YLR055C ARP2P32381 391 aaKnown RBP10.81□□□□□ -0.68
SPT8YLR055C YKL100CP34248 587 aa10.81□□□□□ -0.68
SPT8YLR055C CAF4P36130 643 aa10.81□□□□□ -0.68
SPT8YLR055C FTH1P38310 465 aa10.81□□□□□ -0.68
SPT8YLR055C GCD14P46959 383 aaPredicted RBP10.81□□□□□ -0.68
SPT8YLR055C ARP4P80428 489 aa10.81□□□□□ -0.68
SPT8YLR055C YMR206WQ03695 313 aa10.81□□□□□ -0.68
SPT8YLR055C PUS7Q08647 676 aaKnown RBP10.81□□□□□ -0.68
SPT8YLR055C GPB1Q08886 897 aa10.81□□□□□ -0.68
SPT8YLR055C THP3Q12049 470 aaKnown RBP10.81□□□□□ -0.68
SPT8YLR055C AHA1Q12449 350 aaKnown RBP10.81□□□□□ -0.68
SPT8YLR055C YKL018C-AQ3E7A7 99 aa10.81□□□□□ -0.68
SPT8YLR055C FUI1P38196 639 aa10.81□□□□□ -0.68
SPT8YLR055C YHR078WP38799 552 aa10.81□□□□□ -0.68
SPT8YLR055C MTW1P39731 289 aa10.81□□□□□ -0.68
SPT8YLR055C BIR1P47134 954 aa10.81□□□□□ -0.68
SPT8YLR055C RAI1P53063 387 aaKnown RBP10.81□□□□□ -0.68
SPT8YLR055C YPL014WQ02606 381 aa10.81□□□□□ -0.68
SPT8YLR055C GOT1Q03554 138 aa10.81□□□□□ -0.68
SPT8YLR055C RRP17Q04031 235 aaPredicted RBP10.81□□□□□ -0.68
SPT8YLR055C BCH1Q05029 724 aa10.81□□□□□ -0.68
SPT8YLR055C PEX10Q05568 337 aa10.81□□□□□ -0.68
SPT8YLR055C MDM36Q06820 579 aa10.81□□□□□ -0.68
SPT8YLR055C NOP56Q12460 504 aaKnown RBP RIP-Chip data10.81□□□□□ -0.68 RIP-Chip
SPT8YLR055C RMD5Q12508 421 aa10.81□□□□□ -0.68
SPT8YLR055C TIM9O74700 87 aa10.8□□□□□ -0.68
SPT8YLR055C PET112P33893 541 aa10.8□□□□□ -0.68
SPT8YLR055C ADD66P36040 267 aa10.8□□□□□ -0.68
SPT8YLR055C PPN1Q04119 674 aa10.8□□□□□ -0.68
SPT8YLR055C MRX10Q05648 414 aa10.8□□□□□ -0.68
SPT8YLR055C MRH1Q12117 320 aaPredicted RBP10.8□□□□□ -0.68
SPT8YLR055C CDC31P06704 161 aaKnown RBP10.79□□□□□ -0.68
SPT8YLR055C NFT1P0CE68 1218 aa10.79□□□□□ -0.68
SPT8YLR055C ARF2P19146 181 aaKnown RBP10.79□□□□□ -0.68
Retrieved 100 of 5,963 RNA–protein pairs in 124.1 ms