RNA–Protein interactions for RNA: YLR022C

SDO1, Transcript of Guanine nucleotide exchange factor (GEF) for Ria1p, yeastyeast

Gene SDO1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDO1YLR022C MRPL1Q04599 285 aa3.29□□□□□ -1.88
SDO1YLR022C ECM22Q05958 814 aaPredicted RBP3.29□□□□□ -1.88
SDO1YLR022C YOR387CQ08910 206 aa3.29□□□□□ -1.88
SDO1YLR022C SAM4Q08985 325 aaKnown RBP3.29□□□□□ -1.88
SDO1YLR022C GET3Q12154 354 aaKnown RBP3.29□□□□□ -1.88
SDO1YLR022C SKM1Q12469 655 aa3.29□□□□□ -1.88
SDO1YLR022C SEC16P48415 2195 aaKnown RBP3.28□□□□□ -1.88
SDO1YLR022C HIS4P00815 799 aaKnown RBP3.28□□□□□ -1.88
SDO1YLR022C ASP3-2P0CX77 362 aa3.28□□□□□ -1.88
SDO1YLR022C ASP3-3P0CX78 362 aa3.28□□□□□ -1.88
SDO1YLR022C ASP3-4P0CX79 362 aa3.28□□□□□ -1.88
SDO1YLR022C ASP3-1P0CZ17 362 aa3.28□□□□□ -1.88
SDO1YLR022C YCP4P25349 247 aaKnown RBP3.28□□□□□ -1.88
SDO1YLR022C SGE1P33335 543 aa3.28□□□□□ -1.88
SDO1YLR022C SDS22P36047 338 aa3.28□□□□□ -1.88
SDO1YLR022C FUI1P38196 639 aa3.28□□□□□ -1.88
SDO1YLR022C LNP1P38878 278 aa3.28□□□□□ -1.88
SDO1YLR022C YJL070CP40361 888 aa3.28□□□□□ -1.88
SDO1YLR022C UBP7P40453 1071 aa3.28□□□□□ -1.88
SDO1YLR022C IMA5P40884 581 aa3.28□□□□□ -1.88
SDO1YLR022C UFE1P41834 346 aa3.28□□□□□ -1.88
SDO1YLR022C RPL15BP54780 204 aaPredicted RBP3.28□□□□□ -1.88
SDO1YLR022C ARA2Q04212 335 aa3.28□□□□□ -1.88
SDO1YLR022C YPL191CQ08930 360 aa3.28□□□□□ -1.88
SDO1YLR022C NUR1Q12066 484 aa3.28□□□□□ -1.88
SDO1YLR022C TMS1Q12116 473 aa3.28□□□□□ -1.88
SDO1YLR022C HER1Q12276 1246 aa3.28□□□□□ -1.88
SDO1YLR022C NAG1Q8TGN9 163 aa3.28□□□□□ -1.88
SDO1YLR022C ILS1P09436 1072 aaKnown RBP3.27□□□□□ -1.89
SDO1YLR022C ADH4P10127 382 aa3.27□□□□□ -1.89
SDO1YLR022C LDB16P25587 256 aa3.27□□□□□ -1.89
SDO1YLR022C PEP3P27801 918 aa3.27□□□□□ -1.89
SDO1YLR022C XRS2P33301 854 aa3.27□□□□□ -1.89
SDO1YLR022C PTH2P34222 208 aa3.27□□□□□ -1.89
SDO1YLR022C KDX1P36005 433 aa3.27□□□□□ -1.89
SDO1YLR022C PXL1P36166 706 aa3.27□□□□□ -1.89
SDO1YLR022C AGP2P38090 596 aa3.27□□□□□ -1.89
SDO1YLR022C SAW1P39735 261 aa3.27□□□□□ -1.89
SDO1YLR022C ARB1P40024 610 aaKnown RBP3.27□□□□□ -1.89
SDO1YLR022C FAU1P40099 211 aa3.27□□□□□ -1.89
SDO1YLR022C SER33P40510 469 aa3.27□□□□□ -1.89
SDO1YLR022C STB2P46679 850 aa3.27□□□□□ -1.89
SDO1YLR022C YGL138CP53122 345 aa3.27□□□□□ -1.89
SDO1YLR022C RET3P53600 189 aa3.27□□□□□ -1.89
SDO1YLR022C ESF2P53743 316 aaKnown RBP3.27□□□□□ -1.89
SDO1YLR022C ARK1P53974 638 aa3.27□□□□□ -1.89
SDO1YLR022C YPL113CQ02961 396 aa3.27□□□□□ -1.89
SDO1YLR022C VHS1Q03785 461 aa3.27□□□□□ -1.89
SDO1YLR022C RTN1Q04947 295 aaKnown RBP3.27□□□□□ -1.89
SDO1YLR022C COG4Q06096 861 aa3.27□□□□□ -1.89
SDO1YLR022C AAD4Q07747 329 aa3.27□□□□□ -1.89
SDO1YLR022C YRA1Q12159 226 aaKnown RBP3.27□□□□□ -1.89
SDO1YLR022C CDC16P09798 840 aa3.26□□□□□ -1.89
SDO1YLR022C SPT15P13393 240 aaKnown RBP3.26□□□□□ -1.89
SDO1YLR022C ARF2P19146 181 aaKnown RBP3.26□□□□□ -1.89
SDO1YLR022C AIM17P23180 465 aaKnown RBP3.26□□□□□ -1.89
SDO1YLR022C RPN12P32496 274 aa3.26□□□□□ -1.89
SDO1YLR022C TFC3P34111 1160 aa3.26□□□□□ -1.89
SDO1YLR022C VBA2P38358 474 aaKnown RBP3.26□□□□□ -1.89
SDO1YLR022C RRP3P38712 501 aaKnown RBP3.26□□□□□ -1.89
SDO1YLR022C SWD1P39706 426 aa3.26□□□□□ -1.89
SDO1YLR022C GUF1P46943 645 aa3.26□□□□□ -1.89
SDO1YLR022C ACS1Q01574 713 aa3.26□□□□□ -1.89
SDO1YLR022C AAT1Q01802 451 aa3.26□□□□□ -1.89
SDO1YLR022C SND1Q04007 877 aa3.26□□□□□ -1.89
SDO1YLR022C AIM6Q07716 390 aa3.26□□□□□ -1.89
SDO1YLR022C PSR2Q07949 397 aa3.26□□□□□ -1.89
SDO1YLR022C CLP1Q08685 445 aaPredicted RBP3.26□□□□□ -1.89
SDO1YLR022C RIM20Q12033 661 aa3.26□□□□□ -1.89
SDO1YLR022C SGT2Q12118 346 aaKnown RBP3.26□□□□□ -1.89
SDO1YLR022C PGA3Q12746 312 aaKnown RBP3.26□□□□□ -1.89
SDO1YLR022C SMC6Q12749 1114 aa3.26□□□□□ -1.89
SDO1YLR022C YBR255C-AQ3E776 120 aa3.26□□□□□ -1.89
SDO1YLR022C POL30P15873 258 aaKnown RBP3.25□□□□□ -1.89
SDO1YLR022C THR4P16120 514 aaKnown RBP3.25□□□□□ -1.89
SDO1YLR022C TPM1P17536 199 aaKnown RBP3.25□□□□□ -1.89
SDO1YLR022C SWI4P25302 1093 aaKnown RBP3.25□□□□□ -1.89
SDO1YLR022C MRS6P32864 603 aaKnown RBP3.25□□□□□ -1.89
SDO1YLR022C FHL1P39521 936 aa3.25□□□□□ -1.89
SDO1YLR022C MEP2P41948 499 aa3.25□□□□□ -1.89
SDO1YLR022C UBX4P54730 416 aa3.25□□□□□ -1.89
SDO1YLR022C MUB1Q03162 620 aa3.25□□□□□ -1.89
SDO1YLR022C GLE1Q12315 538 aa3.25□□□□□ -1.89
SDO1YLR022C SST2P11972 698 aaKnown RBP3.24□□□□□ -1.89
SDO1YLR022C SEC63P14906 663 aa3.24□□□□□ -1.89
SDO1YLR022C FRS2P15625 503 aaKnown RBP3.24□□□□□ -1.89
SDO1YLR022C GSH1P32477 678 aa3.24□□□□□ -1.89
SDO1YLR022C FRE1P32791 686 aa3.24□□□□□ -1.89
SDO1YLR022C YSC83P32792 385 aa3.24□□□□□ -1.89
SDO1YLR022C ATO2P32907 282 aa3.24□□□□□ -1.89
SDO1YLR022C SEF1P34228 1148 aa3.24□□□□□ -1.89
SDO1YLR022C PXA2P34230 853 aa3.24□□□□□ -1.89
SDO1YLR022C RPF2P36160 344 aaKnown RBP3.24□□□□□ -1.89
SDO1YLR022C ECM13P38195 257 aa3.24□□□□□ -1.89
SDO1YLR022C SIP3P38717 1229 aa3.24□□□□□ -1.89
SDO1YLR022C ELO1P39540 310 aa3.24□□□□□ -1.89
SDO1YLR022C RPT2P40327 437 aaKnown RBP3.24□□□□□ -1.89
SDO1YLR022C ASK10P48361 1146 aa3.24□□□□□ -1.89
SDO1YLR022C TAN1P53072 289 aaPredicted RBP3.24□□□□□ -1.89
SDO1YLR022C CUE3P53137 624 aaKnown RBP3.24□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms