RNA–Protein interactions for RNA: YJR102C

VPS25, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS25, Length 609 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS25YJR102C ALT2P52892 507 aa3.79□□□□□ -1.8
VPS25YJR102C MRPL19P53875 158 aa3.79□□□□□ -1.8
VPS25YJR102C THI20Q08224 551 aa3.79□□□□□ -1.8
VPS25YJR102C NDD1Q08887 554 aa3.79□□□□□ -1.8
VPS25YJR102C RIM20Q12033 661 aa3.79□□□□□ -1.8
VPS25YJR102C RAD52P06778 471 aaKnown RBP3.78□□□□□ -1.8
VPS25YJR102C PEP4P07267 405 aaKnown RBP3.78□□□□□ -1.8
VPS25YJR102C APE1P14904 514 aa3.78□□□□□ -1.8
VPS25YJR102C CDC23P16522 626 aa3.78□□□□□ -1.8
VPS25YJR102C MET28P40573 187 aa3.78□□□□□ -1.8
VPS25YJR102C DIM1P41819 318 aaKnown RBP3.78□□□□□ -1.8
VPS25YJR102C AIM22P47051 409 aa3.78□□□□□ -1.8
VPS25YJR102C YMR087WQ04299 284 aa3.78□□□□□ -1.8
VPS25YJR102C RAV1P47104 1357 aa3.77□□□□□ -1.81
VPS25YJR102C CAR1P00812 333 aaKnown RBP3.77□□□□□ -1.81
VPS25YJR102C MET17P06106 444 aa3.77□□□□□ -1.81
VPS25YJR102C COR1P07256 457 aa3.77□□□□□ -1.81
VPS25YJR102C ELO2P25358 347 aa3.77□□□□□ -1.81
VPS25YJR102C PRD1P25375 712 aa3.77□□□□□ -1.81
VPS25YJR102C SEC1P30619 724 aaKnown RBP3.77□□□□□ -1.81
VPS25YJR102C OSH3P38713 996 aaKnown RBP3.77□□□□□ -1.81
VPS25YJR102C RTT107P38850 1070 aa3.77□□□□□ -1.81
VPS25YJR102C VPS52P39904 641 aa3.77□□□□□ -1.81
VPS25YJR102C YTA12P40341 825 aa3.77□□□□□ -1.81
VPS25YJR102C YJR154WP47181 346 aa3.77□□□□□ -1.81
VPS25YJR102C CRZ1P53968 678 aa3.77□□□□□ -1.81
VPS25YJR102C PDS5Q04264 1277 aa3.77□□□□□ -1.81
VPS25YJR102C IVY1Q04934 453 aa3.77□□□□□ -1.81
VPS25YJR102C YOR365CQ08844 703 aa3.77□□□□□ -1.81
VPS25YJR102C DAP1Q12091 152 aa3.77□□□□□ -1.81
VPS25YJR102C RTP1Q12751 981 aa3.77□□□□□ -1.81
VPS25YJR102C GPI10P30777 616 aa3.76□□□□□ -1.81
VPS25YJR102C MRE11P32829 692 aa3.76□□□□□ -1.81
VPS25YJR102C PTR2P32901 601 aa3.76□□□□□ -1.81
VPS25YJR102C JNM1P36224 373 aa3.76□□□□□ -1.81
VPS25YJR102C VID24P38263 362 aa3.76□□□□□ -1.81
VPS25YJR102C TIF4631P39935 952 aaKnown RBP3.76□□□□□ -1.81
VPS25YJR102C YJL070CP40361 888 aa3.76□□□□□ -1.81
VPS25YJR102C CSM2P40465 213 aa3.76□□□□□ -1.81
VPS25YJR102C IRC6P43615 237 aa3.76□□□□□ -1.81
VPS25YJR102C SCD6P45978 349 aaKnown RBP RIP-Chip data3.76□□□□□ -1.81not detected
VPS25YJR102C STB2P46679 850 aa3.76□□□□□ -1.81
VPS25YJR102C YGL260WP53056 76 aa3.76□□□□□ -1.81
VPS25YJR102C DRN1P53255 507 aaKnown RBP3.76□□□□□ -1.81
VPS25YJR102C ZPR1P53303 486 aaKnown RBP3.76□□□□□ -1.81
VPS25YJR102C HEF3P53978 1044 aaKnown RBP3.76□□□□□ -1.81
VPS25YJR102C YMR317WQ04893 1140 aa3.76□□□□□ -1.81
VPS25YJR102C ATG29Q12092 213 aa3.76□□□□□ -1.81
VPS25YJR102C YML002WP0CF17 737 aa3.75□□□□□ -1.81
VPS25YJR102C PMS1P14242 873 aa3.75□□□□□ -1.81
VPS25YJR102C CKA1P15790 372 aa3.75□□□□□ -1.81
VPS25YJR102C PRO3P32263 286 aaKnown RBP3.75□□□□□ -1.81
VPS25YJR102C FRE1P32791 686 aa3.75□□□□□ -1.81
VPS25YJR102C TCM62P38228 572 aaKnown RBP3.75□□□□□ -1.81
VPS25YJR102C UTP9P38882 575 aaKnown RBP3.75□□□□□ -1.81
VPS25YJR102C TWF1P53250 332 aa3.75□□□□□ -1.81
VPS25YJR102C RLI1Q03195 608 aaKnown RBP3.75□□□□□ -1.81
VPS25YJR102C MRD1Q06106 887 aaKnown RBP3.75□□□□□ -1.81
VPS25YJR102C PHO92Q06390 306 aa3.75□□□□□ -1.81
VPS25YJR102C YDL007C-AQ2V2Q0 85 aa3.75□□□□□ -1.81
VPS25YJR102C MES1P00958 751 aaKnown RBP3.74□□□□□ -1.81
VPS25YJR102C CDC31P06704 161 aaKnown RBP3.74□□□□□ -1.81
VPS25YJR102C RED1P14291 827 aa3.74□□□□□ -1.81
VPS25YJR102C PRP2P20095 876 aaPredicted RBP3.74□□□□□ -1.81
VPS25YJR102C MSN2P33748 704 aa3.74□□□□□ -1.81
VPS25YJR102C PMT1P33775 817 aa3.74□□□□□ -1.81
VPS25YJR102C SIP2P34164 415 aaKnown RBP3.74□□□□□ -1.81
VPS25YJR102C CMC1P36064 111 aa3.74□□□□□ -1.81
VPS25YJR102C MBB1P39534 108 aa3.74□□□□□ -1.81
VPS25YJR102C POP1P41812 875 aa3.74□□□□□ -1.81
VPS25YJR102C ROK1P45818 564 aaPredicted RBP3.74□□□□□ -1.81
VPS25YJR102C SLD5Q03406 294 aa3.74□□□□□ -1.81
VPS25YJR102C SEC39Q12745 709 aa3.74□□□□□ -1.81
VPS25YJR102C RPL31BP0C2H9 113 aaKnown RBP3.73□□□□□ -1.81
VPS25YJR102C MTF1P14908 341 aaKnown RBP3.73□□□□□ -1.81
VPS25YJR102C YUR1P26725 428 aa3.73□□□□□ -1.81
VPS25YJR102C NDC1P32500 655 aa3.73□□□□□ -1.81
VPS25YJR102C FMP46P36141 133 aaKnown RBP3.73□□□□□ -1.81
VPS25YJR102C DUG2P38149 878 aa3.73□□□□□ -1.81
VPS25YJR102C MET18P40469 1032 aa3.73□□□□□ -1.81
VPS25YJR102C HXT14P42833 540 aa3.73□□□□□ -1.81
VPS25YJR102C GPI1P53306 609 aa3.73□□□□□ -1.81
VPS25YJR102C LSP1Q12230 341 aaKnown RBP3.73□□□□□ -1.81
VPS25YJR102C EXO70P19658 623 aa3.72□□□□□ -1.81
VPS25YJR102C ROX1P25042 368 aa3.72□□□□□ -1.81
VPS25YJR102C YCR007CP25354 239 aa3.72□□□□□ -1.81
VPS25YJR102C UTR4P32626 227 aa3.72□□□□□ -1.81
VPS25YJR102C MUM2P38236 366 aa3.72□□□□□ -1.81
VPS25YJR102C OCA1P50946 238 aaPredicted RBP3.72□□□□□ -1.81
VPS25YJR102C SYF1Q04048 859 aaPredicted RBP3.72□□□□□ -1.81
VPS25YJR102C TAF11Q04226 346 aa3.72□□□□□ -1.81
VPS25YJR102C YLR287CQ05881 355 aa3.72□□□□□ -1.81
VPS25YJR102C MRPL51Q06090 140 aaPredicted RBP3.72□□□□□ -1.81
VPS25YJR102C YDL009CQ12210 107 aa3.72□□□□□ -1.81
VPS25YJR102C RTN2Q12443 393 aa3.72□□□□□ -1.81
VPS25YJR102C BRR1Q99177 341 aaPredicted RBP3.72□□□□□ -1.81
VPS25YJR102C SUC2P00724 532 aa3.71□□□□□ -1.82
VPS25YJR102C MRS3P10566 314 aa3.71□□□□□ -1.82
VPS25YJR102C RPL3P14126 387 aaKnown RBP3.71□□□□□ -1.82
VPS25YJR102C FUR1P18562 216 aaKnown RBP3.71□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms