RNA–Protein interactions for RNA: YJR042W

NUP85, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP85, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP85YJR042W OSH3P38713 996 aaKnown RBP3.72□□□□□ -1.81
NUP85YJR042W MSS4P38994 779 aa3.72□□□□□ -1.81
NUP85YJR042W AKR1P39010 764 aa3.72□□□□□ -1.81
NUP85YJR042W ASG1P40467 964 aa3.72□□□□□ -1.81
NUP85YJR042W CTR1P49573 406 aa3.72□□□□□ -1.81
NUP85YJR042W USA1Q03714 838 aa3.72□□□□□ -1.81
NUP85YJR042W YOR223WQ12015 292 aa3.72□□□□□ -1.81
NUP85YJR042W NUS1Q12063 375 aa3.72□□□□□ -1.81
NUP85YJR042W DDP1Q99321 188 aaKnown RBP3.72□□□□□ -1.81
NUP85YJR042W COX3P00420 269 aa3.71□□□□□ -1.82
NUP85YJR042W RAP1P11938 827 aa3.71□□□□□ -1.82
NUP85YJR042W SRV2P17555 526 aaKnown RBP3.71□□□□□ -1.82
NUP85YJR042W PRE8P23639 250 aa3.71□□□□□ -1.82
NUP85YJR042W VPS3P23643 1011 aa3.71□□□□□ -1.82
NUP85YJR042W YIH1P25637 258 aa3.71□□□□□ -1.82
NUP85YJR042W YIM1P28625 365 aa3.71□□□□□ -1.82
NUP85YJR042W ARO4P32449 370 aaKnown RBP3.71□□□□□ -1.82
NUP85YJR042W ERG1P32476 496 aaKnown RBP3.71□□□□□ -1.82
NUP85YJR042W PTK1P36002 662 aaPredicted RBP3.71□□□□□ -1.82
NUP85YJR042W TUL1P36096 758 aa3.71□□□□□ -1.82
NUP85YJR042W STV1P37296 890 aa3.71□□□□□ -1.82
NUP85YJR042W TAT1P38085 619 aa3.71□□□□□ -1.82
NUP85YJR042W YHR078WP38799 552 aa3.71□□□□□ -1.82
NUP85YJR042W FAD1P38913 306 aa3.71□□□□□ -1.82
NUP85YJR042W MTR3P48240 250 aaPredicted RBP3.71□□□□□ -1.82
NUP85YJR042W HSH155P49955 971 aaKnown RBP3.71□□□□□ -1.82
NUP85YJR042W RIB4P50861 169 aaPredicted RBP3.71□□□□□ -1.82
NUP85YJR042W PUS2P53167 370 aa3.71□□□□□ -1.82
NUP85YJR042W SPO19Q03029 223 aa3.71□□□□□ -1.82
NUP85YJR042W MSC2Q03455 724 aa3.71□□□□□ -1.82
NUP85YJR042W YOL159CQ08300 171 aa3.71□□□□□ -1.82
NUP85YJR042W RAD61Q99359 647 aa3.71□□□□□ -1.82
NUP85YJR042W RPL6BP05739 176 aaKnown RBP3.71□□□□□ -1.82
NUP85YJR042W FRS2P15625 503 aaKnown RBP3.71□□□□□ -1.82
NUP85YJR042W MBR1P23493 339 aa3.71□□□□□ -1.82
NUP85YJR042W PPH22P23595 377 aa3.71□□□□□ -1.82
NUP85YJR042W MEK1P24719 497 aaPredicted RBP3.71□□□□□ -1.82
NUP85YJR042W LRE1P25579 583 aaKnown RBP3.71□□□□□ -1.82
NUP85YJR042W RDS1P25611 832 aa3.71□□□□□ -1.82
NUP85YJR042W SSE2P32590 693 aaKnown RBP3.71□□□□□ -1.82
NUP85YJR042W SIP3P38717 1229 aa3.71□□□□□ -1.82
NUP85YJR042W KEL1P38853 1164 aaKnown RBP3.71□□□□□ -1.82
NUP85YJR042W TRF5P48561 642 aaKnown RBP3.71□□□□□ -1.82
NUP85YJR042W LYS5P50113 272 aa3.71□□□□□ -1.82
NUP85YJR042W RPT4P53549 437 aaKnown RBP3.71□□□□□ -1.82
NUP85YJR042W DBP6P53734 629 aaKnown RBP3.71□□□□□ -1.82
NUP85YJR042W ASI2P53895 289 aa3.71□□□□□ -1.82
NUP85YJR042W BOP3P53958 396 aa3.71□□□□□ -1.82
NUP85YJR042W ADE16P54113 591 aaKnown RBP3.71□□□□□ -1.82
NUP85YJR042W RPL6AQ02326 176 aaKnown RBP3.71□□□□□ -1.82
NUP85YJR042W STD1Q02794 444 aa3.71□□□□□ -1.82
NUP85YJR042W CLU1Q03690 1277 aaKnown RBP3.71□□□□□ -1.82
NUP85YJR042W YRM1Q12340 786 aa3.71□□□□□ -1.82
NUP85YJR042W AHC1Q12433 566 aa3.71□□□□□ -1.82
NUP85YJR042W RRD2Q12461 358 aa3.71□□□□□ -1.82
NUP85YJR042W RAS1P01119 309 aa3.7□□□□□ -1.82
NUP85YJR042W CDC36P06100 191 aaPredicted RBP3.7□□□□□ -1.82
NUP85YJR042W PRE10P21242 288 aaKnown RBP RIP-Chip data3.7□□□□□ -1.82 RIP-Chip
NUP85YJR042W MGR1P25573 417 aa3.7□□□□□ -1.82
NUP85YJR042W PDB1P32473 366 aaKnown RBP3.7□□□□□ -1.82
NUP85YJR042W SIC1P38634 284 aa3.7□□□□□ -1.82
NUP85YJR042W TCD1P38756 429 aa3.7□□□□□ -1.82
NUP85YJR042W NET1P47035 1189 aa3.7□□□□□ -1.82
NUP85YJR042W LIA1P47120 325 aaKnown RBP3.7□□□□□ -1.82
NUP85YJR042W PRP31P49704 494 aaPredicted RBP3.7□□□□□ -1.82
NUP85YJR042W STR3P53101 465 aaKnown RBP3.7□□□□□ -1.82
NUP85YJR042W GIM3P53900 129 aa3.7□□□□□ -1.82
NUP85YJR042W RSN1Q03516 953 aa3.7□□□□□ -1.82
NUP85YJR042W YMR160WQ03823 816 aa3.7□□□□□ -1.82
NUP85YJR042W HOF1Q05080 669 aa3.7□□□□□ -1.82
NUP85YJR042W YLR173WQ06247 608 aa3.7□□□□□ -1.82
NUP85YJR042W VTA1Q06263 330 aa3.7□□□□□ -1.82
NUP85YJR042W SYT1Q06836 1226 aa3.7□□□□□ -1.82
NUP85YJR042W YFH1Q07540 174 aa3.7□□□□□ -1.82
NUP85YJR042W SIL1Q08199 421 aa3.7□□□□□ -1.82
NUP85YJR042W FRE3Q08905 711 aa3.7□□□□□ -1.82
NUP85YJR042W PKH2Q12236 1081 aaKnown RBP3.7□□□□□ -1.82
NUP85YJR042W SPO7P18410 259 aa3.7□□□□□ -1.82
NUP85YJR042W YCR015CP25616 317 aa3.7□□□□□ -1.82
NUP85YJR042W RFA2P26754 273 aaKnown RBP3.7□□□□□ -1.82
NUP85YJR042W NTH1P32356 751 aa3.7□□□□□ -1.82
NUP85YJR042W DCG1P32460 244 aa3.7□□□□□ -1.82
NUP85YJR042W ASC1P38011 319 aaKnown RBP3.7□□□□□ -1.82
NUP85YJR042W RFT1P38206 574 aaPredicted RBP3.7□□□□□ -1.82
NUP85YJR042W ZTA1P38230 334 aaKnown RBP3.7□□□□□ -1.82
NUP85YJR042W MSR1P38714 643 aa3.7□□□□□ -1.82
NUP85YJR042W OSH7P38755 437 aa3.7□□□□□ -1.82
NUP85YJR042W PIH1P38768 344 aa3.7□□□□□ -1.82
NUP85YJR042W ARO9P38840 513 aaPredicted RBP3.7□□□□□ -1.82
NUP85YJR042W AFG3P39925 761 aa3.7□□□□□ -1.82
NUP85YJR042W ULP2P40537 1034 aaPredicted RBP3.7□□□□□ -1.82
NUP85YJR042W CIN1P40987 1014 aa3.7□□□□□ -1.82
NUP85YJR042W YGR149WP48236 432 aa3.7□□□□□ -1.82
NUP85YJR042W RFX1P48743 811 aa3.7□□□□□ -1.82
NUP85YJR042W MRK1P50873 501 aa3.7□□□□□ -1.82
NUP85YJR042W MCM6P53091 1017 aaKnown RBP3.7□□□□□ -1.82
NUP85YJR042W MND1P53102 219 aa3.7□□□□□ -1.82
NUP85YJR042W YGR012WP53206 393 aa3.7□□□□□ -1.82
NUP85YJR042W BUD9P53226 547 aa3.7□□□□□ -1.82
NUP85YJR042W MPP6P53725 186 aaPredicted RBP3.7□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 10.5 ms