RNA–Protein interactions for RNA: YGR048W

UFD1, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene UFD1, Length 1,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD1YGR048W RTC3P38804 111 aaPredicted RBP7.9□□□□□ -1.14
UFD1YGR048W BIG1P38813 335 aa7.9□□□□□ -1.14
UFD1YGR048W LNP1P38878 278 aa7.9□□□□□ -1.14
UFD1YGR048W CYC2P38909 366 aa7.9□□□□□ -1.14
UFD1YGR048W HRB1P38922 454 aaKnown RBP RIP-Chip data7.9□□□□□ -1.14not detected
UFD1YGR048W IPT1P38954 527 aa7.9□□□□□ -1.14
UFD1YGR048W SSO2P39926 295 aa7.9□□□□□ -1.14
UFD1YGR048W YER184CP39961 794 aa7.9□□□□□ -1.14
UFD1YGR048W FAF1P40546 346 aaPredicted RBP7.9□□□□□ -1.14
UFD1YGR048W CPR7P47103 393 aa7.9□□□□□ -1.14
UFD1YGR048W YGR026WP53217 278 aa7.9□□□□□ -1.14
UFD1YGR048W YGR067CP53243 804 aa7.9□□□□□ -1.14
UFD1YGR048W YNL095CP53932 642 aa7.9□□□□□ -1.14
UFD1YGR048W ARL3Q02804 198 aa7.9□□□□□ -1.14
UFD1YGR048W HSP31Q04432 237 aa7.9□□□□□ -1.14
UFD1YGR048W APC4Q04601 652 aa7.9□□□□□ -1.14
UFD1YGR048W YDR222WQ04925 415 aa7.9□□□□□ -1.14
UFD1YGR048W HPF1Q05164 967 aa7.9□□□□□ -1.14
UFD1YGR048W VPS74Q06385 345 aa7.9□□□□□ -1.14
UFD1YGR048W ARO10Q06408 635 aa7.9□□□□□ -1.14
UFD1YGR048W GRS2Q06817 618 aa7.9□□□□□ -1.14
UFD1YGR048W YPD1Q07688 167 aa7.9□□□□□ -1.14
UFD1YGR048W MDM32Q12171 622 aa7.9□□□□□ -1.14
UFD1YGR048W MYO1P08964 1928 aa7.9□□□□□ -1.15
UFD1YGR048W ENA1P13587 1091 aa7.89□□□□□ -1.15
UFD1YGR048W RPL24BP24000 155 aaKnown RBP7.89□□□□□ -1.15
UFD1YGR048W KRR1P25586 316 aaPredicted RBP7.89□□□□□ -1.15
UFD1YGR048W RAD27P26793 382 aa7.89□□□□□ -1.15
UFD1YGR048W CIN8P27895 1000 aa7.89□□□□□ -1.15
UFD1YGR048W AEP1P32493 518 aa7.89□□□□□ -1.15
UFD1YGR048W UTR4P32626 227 aa7.89□□□□□ -1.15
UFD1YGR048W ABD1P32783 436 aaPredicted RBP7.89□□□□□ -1.15
UFD1YGR048W CDC13P32797 924 aaKnown RBP7.89□□□□□ -1.15
UFD1YGR048W JEN1P36035 616 aa7.89□□□□□ -1.15
UFD1YGR048W YKL133CP36066 463 aa7.89□□□□□ -1.15
UFD1YGR048W STV1P37296 890 aa7.89□□□□□ -1.15
UFD1YGR048W ARN2P38724 620 aa7.89□□□□□ -1.15
UFD1YGR048W RRP4P38792 359 aaKnown RBP7.89□□□□□ -1.15
UFD1YGR048W SOP4P39543 234 aaPredicted RBP7.89□□□□□ -1.15
UFD1YGR048W GIP4P39732 760 aa7.89□□□□□ -1.15
UFD1YGR048W TPA1P40032 644 aaKnown RBP7.89□□□□□ -1.15
UFD1YGR048W YIL054WP40524 105 aa7.89□□□□□ -1.15
UFD1YGR048W ALR2P43553 858 aa7.89□□□□□ -1.15
UFD1YGR048W CAF16P43569 289 aa7.89□□□□□ -1.15
UFD1YGR048W VTC4P47075 721 aa7.89□□□□□ -1.15
UFD1YGR048W BIO3P50277 480 aa7.89□□□□□ -1.15
UFD1YGR048W GUP1P53154 560 aa7.89□□□□□ -1.15
UFD1YGR048W YGR035CP53222 116 aa7.89□□□□□ -1.15
UFD1YGR048W CUS2P53830 285 aaPredicted RBP7.89□□□□□ -1.15
UFD1YGR048W NOP13P53883 403 aaKnown RBP RIP-Chip data7.89□□□□□ -1.15not detected
UFD1YGR048W YNL033WP53964 284 aa7.89□□□□□ -1.15
UFD1YGR048W YNL019CP53975 284 aa7.89□□□□□ -1.15
UFD1YGR048W ENA2Q01896 1091 aa7.89□□□□□ -1.15
UFD1YGR048W MFB1Q04922 465 aa7.89□□□□□ -1.15
UFD1YGR048W EMG1Q06287 252 aaKnown RBP7.89□□□□□ -1.15
UFD1YGR048W SLM3Q12093 417 aa7.89□□□□□ -1.15
UFD1YGR048W LYS21Q12122 440 aaKnown RBP7.89□□□□□ -1.15
UFD1YGR048W YPR063CQ12160 140 aa7.89□□□□□ -1.15
UFD1YGR048W HMS1Q12398 434 aa7.89□□□□□ -1.15
UFD1YGR048W TY1A-DR3Q12441 440 aa7.89□□□□□ -1.15
UFD1YGR048W ENA5Q12691 1091 aa7.89□□□□□ -1.15
UFD1YGR048W CBP2P03874 630 aaPredicted RBP7.88□□□□□ -1.15
UFD1YGR048W RPL25P04456 142 aaKnown RBP7.88□□□□□ -1.15
UFD1YGR048W CDC33P07260 213 aaKnown RBP7.88□□□□□ -1.15
UFD1YGR048W PRP5P21372 849 aaPredicted RBP7.88□□□□□ -1.15
UFD1YGR048W APA2P22108 325 aa7.88□□□□□ -1.15
UFD1YGR048W FPS1P23900 669 aa7.88□□□□□ -1.15
UFD1YGR048W ERG6P25087 383 aaKnown RBP7.88□□□□□ -1.15
UFD1YGR048W UBC8P28263 218 aa7.88□□□□□ -1.15
UFD1YGR048W LYP1P32487 611 aa7.88□□□□□ -1.15
UFD1YGR048W ALG3P38179 458 aa7.88□□□□□ -1.15
UFD1YGR048W SIF2P38262 535 aa7.88□□□□□ -1.15
UFD1YGR048W BSD2P38356 321 aa7.88□□□□□ -1.15
UFD1YGR048W PHO89P38361 574 aa7.88□□□□□ -1.15
UFD1YGR048W RIM11P38615 370 aa7.88□□□□□ -1.15
UFD1YGR048W SHU2P38957 223 aa7.88□□□□□ -1.15
UFD1YGR048W RTT105P40063 208 aa7.88□□□□□ -1.15
UFD1YGR048W BNA6P43619 295 aa7.88□□□□□ -1.15
UFD1YGR048W CIT3P43635 486 aa7.88□□□□□ -1.15
UFD1YGR048W RPE1P46969 238 aa7.88□□□□□ -1.15
UFD1YGR048W YJL016WP47072 561 aa7.88□□□□□ -1.15
UFD1YGR048W YJR141WP47172 347 aaPredicted RBP7.88□□□□□ -1.15
UFD1YGR048W SPT20P50875 604 aa7.88□□□□□ -1.15
UFD1YGR048W YGL036WP53185 909 aaPredicted RBP7.88□□□□□ -1.15
UFD1YGR048W HHO1P53551 258 aa7.88□□□□□ -1.15
UFD1YGR048W ECM9Q02202 377 aa7.88□□□□□ -1.15
UFD1YGR048W RPN4Q03465 531 aa7.88□□□□□ -1.15
UFD1YGR048W CSM3Q04659 317 aa7.88□□□□□ -1.15
UFD1YGR048W YPR091CQ06833 770 aa7.88□□□□□ -1.15
UFD1YGR048W TRE2Q08693 809 aa7.88□□□□□ -1.15
UFD1YGR048W FMP40Q08968 688 aaPredicted RBP7.88□□□□□ -1.15
UFD1YGR048W NSL1Q12143 216 aa7.88□□□□□ -1.15
UFD1YGR048W YDR018CQ12185 396 aa7.88□□□□□ -1.15
UFD1YGR048W ARP7Q12406 477 aa7.88□□□□□ -1.15
UFD1YGR048W RIF1P29539 1916 aa7.88□□□□□ -1.15
UFD1YGR048W GPH1P06738 902 aaKnown RBP7.87□□□□□ -1.15
UFD1YGR048W SPE1P08432 466 aa7.87□□□□□ -1.15
UFD1YGR048W PET54P10834 293 aa7.87□□□□□ -1.15
UFD1YGR048W BAR1P12630 587 aa7.87□□□□□ -1.15
UFD1YGR048W ARO3P14843 370 aaKnown RBP7.87□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 27.6 ms