RNA–Protein interactions for RNA: YGR013W

SNU71, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU71, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU71YGR013W YDR061WQ12298 539 aa6.54□□□□□ -1.36
SNU71YGR013W TRP4P07285 380 aaPredicted RBP6.53□□□□□ -1.36
SNU71YGR013W MET3P08536 511 aa6.53□□□□□ -1.36
SNU71YGR013W TAL1P15019 335 aaKnown RBP6.53□□□□□ -1.36
SNU71YGR013W SPO7P18410 259 aa6.53□□□□□ -1.36
SNU71YGR013W IMG1P25626 169 aa6.53□□□□□ -1.36
SNU71YGR013W GAR1P28007 205 aaKnown RBP6.53□□□□□ -1.36
SNU71YGR013W HIS7P33734 552 aaKnown RBP6.53□□□□□ -1.36
SNU71YGR013W PFF1P38244 976 aa6.53□□□□□ -1.36
SNU71YGR013W GDT1P38301 280 aaPredicted RBP6.53□□□□□ -1.36
SNU71YGR013W UIP3P39547 235 aa6.53□□□□□ -1.36
SNU71YGR013W ECM10P39987 644 aa6.53□□□□□ -1.36
SNU71YGR013W RPT4P53549 437 aaKnown RBP6.53□□□□□ -1.36
SNU71YGR013W YML053CQ04978 212 aa6.53□□□□□ -1.36
SNU71YGR013W RRP45Q05636 305 aaKnown RBP6.53□□□□□ -1.36
SNU71YGR013W ENB1Q08299 606 aa6.53□□□□□ -1.36
SNU71YGR013W USV1Q12132 391 aa6.53□□□□□ -1.36
SNU71YGR013W TRM13Q12383 476 aa6.53□□□□□ -1.36
SNU71YGR013W YLR278CQ05854 1341 aa6.53□□□□□ -1.36
SNU71YGR013W URA4P20051 364 aa6.53□□□□□ -1.36
SNU71YGR013W ELO2P25358 347 aa6.53□□□□□ -1.36
SNU71YGR013W LAC1P28496 418 aa6.53□□□□□ -1.36
SNU71YGR013W YIM1P28625 365 aa6.53□□□□□ -1.36
SNU71YGR013W SNU114P36048 1008 aaKnown RBP6.53□□□□□ -1.36
SNU71YGR013W MSR1P38714 643 aa6.53□□□□□ -1.36
SNU71YGR013W ELO1P39540 310 aa6.53□□□□□ -1.36
SNU71YGR013W EPL1P43572 832 aa6.53□□□□□ -1.36
SNU71YGR013W YJL163CP46996 555 aa6.53□□□□□ -1.36
SNU71YGR013W COS5P47187 383 aa6.53□□□□□ -1.36
SNU71YGR013W NMA2P53204 395 aa6.53□□□□□ -1.36
SNU71YGR013W YGR151CP53287 111 aa6.53□□□□□ -1.36
SNU71YGR013W ARP5P53946 755 aa6.53□□□□□ -1.36
SNU71YGR013W RPN9Q04062 393 aaKnown RBP6.53□□□□□ -1.36
SNU71YGR013W HBT1Q07653 1046 aaKnown RBP6.53□□□□□ -1.36
SNU71YGR013W COS7Q07788 383 aa6.53□□□□□ -1.36
SNU71YGR013W TRP3P00937 484 aa6.52□□□□□ -1.37
SNU71YGR013W CHO2P05374 869 aaKnown RBP6.52□□□□□ -1.37
SNU71YGR013W GSH1P32477 678 aa6.52□□□□□ -1.37
SNU71YGR013W SOF1P33750 489 aaKnown RBP6.52□□□□□ -1.37
SNU71YGR013W MRPL4P36517 319 aa6.52□□□□□ -1.37
SNU71YGR013W NTC20P38302 140 aaPredicted RBP6.52□□□□□ -1.37
SNU71YGR013W EFM3P47163 339 aa6.52□□□□□ -1.37
SNU71YGR013W CAF130P53280 1122 aaPredicted RBP6.52□□□□□ -1.37
SNU71YGR013W UFO1Q04511 668 aa6.52□□□□□ -1.37
SNU71YGR013W AEP3Q12089 606 aa6.52□□□□□ -1.37
SNU71YGR013W RKI1Q12189 258 aa6.52□□□□□ -1.37
SNU71YGR013W RTC1Q08281 1341 aa6.52□□□□□ -1.37
SNU71YGR013W YLR358CO13565 187 aa6.51□□□□□ -1.37
SNU71YGR013W AAC1P04710 309 aa6.51□□□□□ -1.37
SNU71YGR013W CLN1P20437 546 aa6.51□□□□□ -1.37
SNU71YGR013W RPN11P43588 306 aaKnown RBP6.51□□□□□ -1.37
SNU71YGR013W YFR020WP43600 232 aa6.51□□□□□ -1.37
SNU71YGR013W MCM6P53091 1017 aaKnown RBP6.51□□□□□ -1.37
SNU71YGR013W IST1P53843 298 aaPredicted RBP6.51□□□□□ -1.37
SNU71YGR013W NSG2P53898 299 aa6.51□□□□□ -1.37
SNU71YGR013W YMR160WQ03823 816 aa6.51□□□□□ -1.37
SNU71YGR013W LCB4Q12246 624 aa6.51□□□□□ -1.37
SNU71YGR013W STE4P18851 423 aa6.51□□□□□ -1.37
SNU71YGR013W FAA1P30624 700 aaKnown RBP6.51□□□□□ -1.37
SNU71YGR013W NUP133P36161 1157 aa6.51□□□□□ -1.37
SNU71YGR013W PXL1P36166 706 aa6.51□□□□□ -1.37
SNU71YGR013W FAD1P38913 306 aa6.51□□□□□ -1.37
SNU71YGR013W ELP2P42935 788 aa6.51□□□□□ -1.37
SNU71YGR013W YJL107CP42947 387 aa6.51□□□□□ -1.37
SNU71YGR013W URB2P47108 1174 aa6.51□□□□□ -1.37
SNU71YGR013W MRPL22P53881 309 aa6.51□□□□□ -1.37
SNU71YGR013W COQ9Q05779 260 aa6.51□□□□□ -1.37
SNU71YGR013W ABF1P14164 731 aa6.5□□□□□ -1.37
SNU71YGR013W GDA1P32621 518 aa6.5□□□□□ -1.37
SNU71YGR013W MIC60P36112 540 aa6.5□□□□□ -1.37
SNU71YGR013W IMD2P38697 523 aaKnown RBP6.5□□□□□ -1.37
SNU71YGR013W FMP52P40008 231 aa6.5□□□□□ -1.37
SNU71YGR013W AGX1P43567 385 aa6.5□□□□□ -1.37
SNU71YGR013W BUL1P48524 976 aa6.5□□□□□ -1.37
SNU71YGR013W YGR127WP53275 312 aa6.5□□□□□ -1.37
SNU71YGR013W RRN5Q02983 363 aa6.5□□□□□ -1.37
SNU71YGR013W TRS23Q03784 219 aa6.5□□□□□ -1.37
SNU71YGR013W YMR130WQ04223 302 aa6.5□□□□□ -1.37
SNU71YGR013W MSC3Q05812 728 aa6.5□□□□□ -1.37
SNU71YGR013W TGS1Q12052 315 aa6.5□□□□□ -1.37
SNU71YGR013W PFK27Q12471 397 aaPredicted RBP6.5□□□□□ -1.37
SNU71YGR013W UBA1P22515 1024 aaKnown RBP6.49□□□□□ -1.37
SNU71YGR013W YBL055CP34220 418 aaPredicted RBP6.49□□□□□ -1.37
SNU71YGR013W LHS1P36016 881 aa6.49□□□□□ -1.37
SNU71YGR013W KSP1P38691 1029 aaKnown RBP6.49□□□□□ -1.37
SNU71YGR013W PHM8P40025 321 aa6.49□□□□□ -1.37
SNU71YGR013W YDR179W-AQ03983 463 aa6.49□□□□□ -1.37
SNU71YGR013W DFG16Q99234 619 aa6.49□□□□□ -1.37
SNU71YGR013W PET111P08468 800 aa6.49□□□□□ -1.37
SNU71YGR013W RPL31BP0C2H9 113 aaKnown RBP6.49□□□□□ -1.37
SNU71YGR013W APL3P38065 1025 aa6.49□□□□□ -1.37
SNU71YGR013W ZTA1P38230 334 aaKnown RBP6.49□□□□□ -1.37
SNU71YGR013W BPL1P48445 690 aaPredicted RBP6.49□□□□□ -1.37
SNU71YGR013W TOM22P49334 152 aa6.49□□□□□ -1.37
SNU71YGR013W SPT20P50875 604 aa6.49□□□□□ -1.37
SNU71YGR013W NBL1Q3E7Y6 73 aa6.49□□□□□ -1.37
SNU71YGR013W NUP192P47054 1683 aa6.49□□□□□ -1.37
SNU71YGR013W RAD9P14737 1309 aa6.48□□□□□ -1.37
SNU71YGR013W ARG81P05085 880 aa6.48□□□□□ -1.37
SNU71YGR013W VBA2P38358 474 aaKnown RBP6.48□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms