RNA–Protein interactions for RNA: YDL147W

RPN5, Transcript of Subunit of the CSN and 26S proteasome lid complexes, yeast

Gene RPN5, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN5	YDL147W	LAG1	P38703	411 aa		5.44	□□□□□ -1.54
RPN5	YDL147W	YHR210C	P38893	341 aa		5.44	□□□□□ -1.54
RPN5	YDL147W	SEC28	P40509	296 aa	Known RBP	5.44	□□□□□ -1.54
RPN5	YDL147W	COS5	P47187	383 aa		5.44	□□□□□ -1.54
RPN5	YDL147W	COP1	P53622	1201 aa	Known RBP	5.44	□□□□□ -1.54
RPN5	YDL147W	VTC3	Q02725	835 aa		5.44	□□□□□ -1.54
RPN5	YDL147W	COS7	Q07788	383 aa		5.44	□□□□□ -1.54
RPN5	YDL147W	VPS54	Q12071	889 aa		5.44	□□□□□ -1.54
RPN5	YDL147W	GPM3	Q12326	303 aa		5.44	□□□□□ -1.54
RPN5	YDL147W	PGK1	P00560	416 aa	Known RBP	5.43	□□□□□ -1.54
RPN5	YDL147W	SNC1	P31109	117 aa		5.43	□□□□□ -1.54
RPN5	YDL147W	MGM1	P32266	881 aa		5.43	□□□□□ -1.54
RPN5	YDL147W	BNA4	P38169	460 aa		5.43	□□□□□ -1.54
RPN5	YDL147W	TOM71	P38825	639 aa	Known RBP	5.43	□□□□□ -1.54
RPN5	YDL147W	HXT9	P40885	567 aa		5.43	□□□□□ -1.54
RPN5	YDL147W	YGL108C	P53139	140 aa		5.43	□□□□□ -1.54
RPN5	YDL147W	RMD9	P53140	646 aa	Known RBP	5.43	□□□□□ -1.54
RPN5	YDL147W	ZPR1	P53303	486 aa	Known RBP	5.43	□□□□□ -1.54
RPN5	YDL147W	SOL4	P53315	255 aa		5.43	□□□□□ -1.54
RPN5	YDL147W	HEF3	P53978	1044 aa	Known RBP	5.43	□□□□□ -1.54
RPN5	YDL147W	SKO1	Q02100	647 aa		5.43	□□□□□ -1.54
RPN5	YDL147W	PEX25	Q02969	394 aa		5.43	□□□□□ -1.54
RPN5	YDL147W	CAC2	Q04199	468 aa		5.43	□□□□□ -1.54
RPN5	YDL147W	SSK1	Q07084	712 aa		5.43	□□□□□ -1.54
RPN5	YDL147W	SIL1	Q08199	421 aa		5.43	□□□□□ -1.54
RPN5	YDL147W	NCE102	Q12207	173 aa	RIP-Chip data	5.43	□□□□□ -1.54	not detected
RPN5	YDL147W	GAL4	P04386	881 aa		5.42	□□□□□ -1.54
RPN5	YDL147W	CFD1	P40558	293 aa		5.42	□□□□□ -1.54
RPN5	YDL147W	YPT11	P48559	417 aa		5.42	□□□□□ -1.54
RPN5	YDL147W	YGR111W	P53265	400 aa		5.42	□□□□□ -1.54
RPN5	YDL147W	DCI1	Q08558	271 aa		5.42	□□□□□ -1.54
RPN5	YDL147W	SPE3	Q12074	293 aa	Known RBP	5.42	□□□□□ -1.54
RPN5	YDL147W	HSP42	Q12329	375 aa		5.42	□□□□□ -1.54
RPN5	YDL147W	EDE1	P34216	1381 aa		5.42	□□□□□ -1.54
RPN5	YDL147W	GPH1	P06738	902 aa	Known RBP	5.41	□□□□□ -1.54
RPN5	YDL147W	MBR1	P23493	339 aa		5.41	□□□□□ -1.54
RPN5	YDL147W	ARA1	P38115	344 aa		5.41	□□□□□ -1.54
RPN5	YDL147W	TCM62	P38228	572 aa	Known RBP	5.41	□□□□□ -1.54
RPN5	YDL147W	RRT2	P38332	387 aa		5.41	□□□□□ -1.54
RPN5	YDL147W	PHO90	P39535	881 aa		5.41	□□□□□ -1.54
RPN5	YDL147W	OCA1	P50946	238 aa	Predicted RBP	5.41	□□□□□ -1.54
RPN5	YDL147W	CUL3	P53202	744 aa		5.41	□□□□□ -1.54
RPN5	YDL147W	YLR112W	Q12130	139 aa		5.41	□□□□□ -1.54
RPN5	YDL147W	CRC1	Q12289	327 aa		5.41	□□□□□ -1.54
RPN5	YDL147W	HIP1	P06775	603 aa		5.4	□□□□□ -1.55
RPN5	YDL147W	NAT1	P12945	854 aa	Known RBP	5.4	□□□□□ -1.55
RPN5	YDL147W	YIM1	P28625	365 aa		5.4	□□□□□ -1.55
RPN5	YDL147W	SLM4	P38247	162 aa		5.4	□□□□□ -1.55
RPN5	YDL147W	YHR054C	P38780	354 aa		5.4	□□□□□ -1.55
RPN5	YDL147W	CAJ1	P39101	391 aa		5.4	□□□□□ -1.55
RPN5	YDL147W	YIL024C	P40543	189 aa		5.4	□□□□□ -1.55
RPN5	YDL147W	POP1	P41812	875 aa		5.4	□□□□□ -1.55
RPN5	YDL147W	PKP2	P53170	491 aa		5.4	□□□□□ -1.55
RPN5	YDL147W	YMR130W	Q04223	302 aa		5.4	□□□□□ -1.55
RPN5	YDL147W	ECI1	Q05871	280 aa		5.4	□□□□□ -1.55
RPN5	YDL147W	YOR365C	Q08844	703 aa		5.4	□□□□□ -1.55
RPN5	YDL147W	CFT2	Q12102	859 aa	Predicted RBP	5.4	□□□□□ -1.55
RPN5	YDL147W	SNT1	P25357	1226 aa		5.39	□□□□□ -1.55
RPN5	YDL147W	PEX2	P32800	271 aa		5.39	□□□□□ -1.55
RPN5	YDL147W	LTV1	P34078	463 aa		5.39	□□□□□ -1.55
RPN5	YDL147W	PIM1	P36775	1133 aa		5.39	□□□□□ -1.55
RPN5	YDL147W	DUG2	P38149	878 aa		5.39	□□□□□ -1.55
RPN5	YDL147W	VHC1	P38329	1120 aa		5.39	□□□□□ -1.55
RPN5	YDL147W	FLO5	P38894	1075 aa		5.39	□□□□□ -1.55
RPN5	YDL147W	TIF4631	P39935	952 aa	Known RBP	5.39	□□□□□ -1.55
RPN5	YDL147W	VMA13	P41807	478 aa	Known RBP	5.39	□□□□□ -1.55
RPN5	YDL147W	ATP22	P50273	684 aa	Predicted RBP	5.39	□□□□□ -1.55
RPN5	YDL147W	HEL2	Q05580	639 aa	Known RBP	5.39	□□□□□ -1.55
RPN5	YDL147W	MED2	Q12124	431 aa		5.39	□□□□□ -1.55
RPN5	YDL147W	YAP1	P19880	650 aa	Known RBP	5.38	□□□□□ -1.55
RPN5	YDL147W	URA4	P20051	364 aa		5.38	□□□□□ -1.55
RPN5	YDL147W	BRF1	P29056	596 aa		5.38	□□□□□ -1.55
RPN5	YDL147W	MCM4	P30665	933 aa	Known RBP	5.38	□□□□□ -1.55
RPN5	YDL147W	DPH2	P32461	534 aa		5.38	□□□□□ -1.55
RPN5	YDL147W	REC114	P32841	428 aa		5.38	□□□□□ -1.55
RPN5	YDL147W	CBP4	P37267	147 aa		5.38	□□□□□ -1.55
RPN5	YDL147W	MMS4	P38257	691 aa		5.38	□□□□□ -1.55
RPN5	YDL147W	YGR016W	P53209	190 aa		5.38	□□□□□ -1.55
RPN5	YDL147W	SLG1	P54867	378 aa		5.38	□□□□□ -1.55
RPN5	YDL147W	YPL014W	Q02606	381 aa		5.38	□□□□□ -1.55
RPN5	YDL147W	SEG1	Q04279	960 aa		5.38	□□□□□ -1.55
RPN5	YDL147W	GLO2	Q05584	274 aa		5.38	□□□□□ -1.55
RPN5	YDL147W	RAD52	P06778	471 aa	Known RBP	5.37	□□□□□ -1.55
RPN5	YDL147W	PUP2	P32379	260 aa		5.37	□□□□□ -1.55
RPN5	YDL147W	GYP6	P32806	458 aa		5.37	□□□□□ -1.55
RPN5	YDL147W	YPK3	P38070	525 aa		5.37	□□□□□ -1.55
RPN5	YDL147W	YJR154W	P47181	346 aa		5.37	□□□□□ -1.55
RPN5	YDL147W	ALT2	P52892	507 aa		5.37	□□□□□ -1.55
RPN5	YDL147W	BUD32	P53323	261 aa		5.37	□□□□□ -1.55
RPN5	YDL147W	RPT4	P53549	437 aa	Known RBP	5.37	□□□□□ -1.55
RPN5	YDL147W	YNL181W	P53878	407 aa		5.37	□□□□□ -1.55
RPN5	YDL147W	NUP100	Q02629	959 aa		5.37	□□□□□ -1.55
RPN5	YDL147W	ACL4	Q03771	387 aa		5.37	□□□□□ -1.55
RPN5	YDL147W	ATX2	Q12067	313 aa		5.37	□□□□□ -1.55
RPN5	YDL147W	AEP3	Q12089	606 aa		5.37	□□□□□ -1.55
RPN5	YDL147W	RPN5	Q12250	445 aa	Known RBP	5.37	□□□□□ -1.55
RPN5	YDL147W	YNL162W-A	Q3E7A8	72 aa		5.37	□□□□□ -1.55
RPN5	YDL147W	SPO7	P18410	259 aa		5.36	□□□□□ -1.55
RPN5	YDL147W	TYR1	P20049	452 aa		5.36	□□□□□ -1.55
RPN5	YDL147W	RRP7	P25368	297 aa	Predicted RBP	5.36	□□□□□ -1.55

Retrieved 100 of 5,963 RNA–protein pairs in 28.7 ms