RNA–Protein interactions for RNA: YDL097C

RPN6, Transcript of Essential, non-ATPase regulatory subunit of the 26S proteasome lid, yeast

Gene RPN6, Length 1,305 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN6	YDL097C	AEP1	P32493	518 aa		4.19	□□□□□ -1.74
RPN6	YDL097C	PEX6	P33760	1030 aa		4.19	□□□□□ -1.74
RPN6	YDL097C	DEF1	P35732	738 aa	Known RBP	4.19	□□□□□ -1.74
RPN6	YDL097C	YBR139W	P38109	508 aa		4.19	□□□□□ -1.74
RPN6	YDL097C	GND1	P38720	489 aa	Known RBP	4.19	□□□□□ -1.74
RPN6	YDL097C	APE4	P38821	490 aa		4.19	□□□□□ -1.74
RPN6	YDL097C	FET3	P38993	636 aa		4.19	□□□□□ -1.74
RPN6	YDL097C	YMR124W	P39523	943 aa	Known RBP	4.19	□□□□□ -1.74
RPN6	YDL097C	TPA1	P40032	644 aa	Known RBP	4.19	□□□□□ -1.74
RPN6	YDL097C	TES1	P41903	349 aa	Known RBP	4.19	□□□□□ -1.74
RPN6	YDL097C	SNZ3	P43545	298 aa		4.19	□□□□□ -1.74
RPN6	YDL097C	ROK1	P45818	564 aa	Predicted RBP	4.19	□□□□□ -1.74
RPN6	YDL097C	PHO86	P46956	311 aa		4.19	□□□□□ -1.74
RPN6	YDL097C	COG1	P53079	417 aa		4.19	□□□□□ -1.74
RPN6	YDL097C	SNZ2	P53824	298 aa		4.19	□□□□□ -1.74
RPN6	YDL097C	YPL068C	Q02749	293 aa		4.19	□□□□□ -1.74
RPN6	YDL097C	TFB2	Q02939	513 aa		4.19	□□□□□ -1.74
RPN6	YDL097C	VAM6	Q07468	1049 aa		4.19	□□□□□ -1.74
RPN6	YDL097C	LDB18	Q07887	179 aa		4.19	□□□□□ -1.74
RPN6	YDL097C	AVO1	Q08236	1176 aa		4.19	□□□□□ -1.74
RPN6	YDL097C	ELG1	Q12050	791 aa		4.19	□□□□□ -1.74
RPN6	YDL097C	YLL054C	Q12244	843 aa		4.19	□□□□□ -1.74
RPN6	YDL097C	BPH1	P25356	2167 aa		4.18	□□□□□ -1.74
RPN6	YDL097C	URA2	P07259	2214 aa	Known RBP	4.18	□□□□□ -1.74
RPN6	YDL097C	MIP6	P38760	659 aa	Known RBP	4.18	□□□□□ -1.74
RPN6	YDL097C	MNL1	P38888	796 aa		4.18	□□□□□ -1.74
RPN6	YDL097C	BUD13	P46947	266 aa	Predicted RBP	4.18	□□□□□ -1.74
RPN6	YDL097C	MNN11	P46985	422 aa	Known RBP	4.18	□□□□□ -1.74
RPN6	YDL097C	MAL11	P53048	616 aa		4.18	□□□□□ -1.74
RPN6	YDL097C	PUS2	P53167	370 aa		4.18	□□□□□ -1.74
RPN6	YDL097C	HST1	P53685	503 aa		4.18	□□□□□ -1.74
RPN6	YDL097C	RNH1	Q04740	348 aa		4.18	□□□□□ -1.74
RPN6	YDL097C	ALG6	Q12001	544 aa	Known RBP	4.18	□□□□□ -1.74
RPN6	YDL097C	YDR018C	Q12185	396 aa		4.18	□□□□□ -1.74
RPN6	YDL097C	YPR071W	Q12346	211 aa		4.18	□□□□□ -1.74
RPN6	YDL097C	YLR111W	Q12528	110 aa		4.18	□□□□□ -1.74
RPN6	YDL097C	SEY1	Q99287	776 aa		4.18	□□□□□ -1.74
RPN6	YDL097C	SEM1	O94742	89 aa		4.17	□□□□□ -1.74
RPN6	YDL097C	RPS3	P05750	240 aa	Known RBP	4.17	□□□□□ -1.74
RPN6	YDL097C	TOP3	P13099	656 aa		4.17	□□□□□ -1.74
RPN6	YDL097C	MXR2	P25566	168 aa		4.17	□□□□□ -1.74
RPN6	YDL097C	AAR2	P32357	355 aa	Predicted RBP	4.17	□□□□□ -1.74
RPN6	YDL097C	SRB5	P32585	307 aa		4.17	□□□□□ -1.74
RPN6	YDL097C	HSE1	P38753	452 aa		4.17	□□□□□ -1.74
RPN6	YDL097C	GAT2	P40209	560 aa		4.17	□□□□□ -1.74
RPN6	YDL097C	XBP1	P40489	647 aa		4.17	□□□□□ -1.74
RPN6	YDL097C	YIL054W	P40524	105 aa		4.17	□□□□□ -1.74
RPN6	YDL097C	UBP6	P43593	499 aa	Known RBP	4.17	□□□□□ -1.74
RPN6	YDL097C	MET12	P46151	657 aa		4.17	□□□□□ -1.74
RPN6	YDL097C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
RPN6	YDL097C	STR3	P53101	465 aa	Known RBP	4.17	□□□□□ -1.74
RPN6	YDL097C	YGR012W	P53206	393 aa		4.17	□□□□□ -1.74
RPN6	YDL097C	DUG3	P53871	357 aa		4.17	□□□□□ -1.74
RPN6	YDL097C	IBD2	P53892	351 aa		4.17	□□□□□ -1.74
RPN6	YDL097C	ALF1	P53904	254 aa		4.17	□□□□□ -1.74
RPN6	YDL097C	YDR109C	Q04585	715 aa		4.17	□□□□□ -1.74
RPN6	YDL097C	CRR1	Q05790	422 aa		4.17	□□□□□ -1.74
RPN6	YDL097C	YPS7	Q06325	596 aa		4.17	□□□□□ -1.74
RPN6	YDL097C	CIR2	Q08822	631 aa		4.17	□□□□□ -1.74
RPN6	YDL097C	GPM3	Q12326	303 aa		4.17	□□□□□ -1.74
RPN6	YDL097C	GEP5	Q12393	293 aa		4.17	□□□□□ -1.74
RPN6	YDL097C	EFG1	Q3E705	233 aa	Known RBP	4.17	□□□□□ -1.74
RPN6	YDL097C	TEF1	P02994	458 aa	Known RBP	4.16	□□□□□ -1.74
RPN6	YDL097C	CDC33	P07260	213 aa	Known RBP	4.16	□□□□□ -1.74
RPN6	YDL097C	NFS1	P25374	497 aa		4.16	□□□□□ -1.74
RPN6	YDL097C	MRC1	P25588	1096 aa		4.16	□□□□□ -1.74
RPN6	YDL097C	PTC6	P25646	442 aa		4.16	□□□□□ -1.74
RPN6	YDL097C	RPS27A	P35997	82 aa	Known RBP	4.16	□□□□□ -1.74
RPN6	YDL097C	RPS27B	P38711	82 aa		4.16	□□□□□ -1.74
RPN6	YDL097C	RIX1	P38883	763 aa	Predicted RBP	4.16	□□□□□ -1.74
RPN6	YDL097C	YIL152W	P40455	235 aa		4.16	□□□□□ -1.74
RPN6	YDL097C	SAP4	P53036	818 aa		4.16	□□□□□ -1.74
RPN6	YDL097C	YGR045C	P53229	120 aa		4.16	□□□□□ -1.74
RPN6	YDL097C	PBP1	P53297	722 aa	Known RBP	4.16	□□□□□ -1.74
RPN6	YDL097C	TRM12	Q04235	462 aa		4.16	□□□□□ -1.74
RPN6	YDL097C	NOP6	Q07623	225 aa	Known RBP	4.16	□□□□□ -1.74
RPN6	YDL097C	MSA1	Q08471	629 aa		4.16	□□□□□ -1.74
RPN6	YDL097C	BIK1	P11709	440 aa		4.15	□□□□□ -1.75
RPN6	YDL097C	LAT1	P12695	482 aa	Known RBP	4.15	□□□□□ -1.75
RPN6	YDL097C	ERS1	P17261	260 aa		4.15	□□□□□ -1.75
RPN6	YDL097C	SRV2	P17555	526 aa	Known RBP	4.15	□□□□□ -1.75
RPN6	YDL097C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.75	not detected
RPN6	YDL097C	AIM26	P32858	118 aa		4.15	□□□□□ -1.75
RPN6	YDL097C	PRP18	P33411	251 aa	Predicted RBP	4.15	□□□□□ -1.75
RPN6	YDL097C	BIT2	P38346	545 aa		4.15	□□□□□ -1.75
RPN6	YDL097C	ATM1	P40416	690 aa		4.15	□□□□□ -1.75
RPN6	YDL097C	RRT5	P43607	289 aa		4.15	□□□□□ -1.75
RPN6	YDL097C	SEH1	P53011	349 aa	Known RBP	4.15	□□□□□ -1.75
RPN6	YDL097C	ERG26	P53199	349 aa	Known RBP	4.15	□□□□□ -1.75
RPN6	YDL097C	ELA1	P53861	379 aa	Predicted RBP	4.15	□□□□□ -1.75
RPN6	YDL097C	CDC14	Q00684	551 aa		4.15	□□□□□ -1.75
RPN6	YDL097C	ENT5	Q03769	411 aa	Known RBP	4.15	□□□□□ -1.75
RPN6	YDL097C	RSA3	Q05942	220 aa	Known RBP	4.15	□□□□□ -1.75
RPN6	YDL097C	YOL075C	Q08234	1294 aa		4.15	□□□□□ -1.75
RPN6	YDL097C	MDM12	Q92328	271 aa		4.15	□□□□□ -1.75
RPN6	YDL097C	CAR1	P00812	333 aa	Known RBP	4.14	□□□□□ -1.75
RPN6	YDL097C	GLK1	P17709	500 aa	Known RBP	4.14	□□□□□ -1.75
RPN6	YDL097C	DBF2	P22204	572 aa		4.14	□□□□□ -1.75
RPN6	YDL097C	YKL102C	P34249	101 aa		4.14	□□□□□ -1.75
RPN6	YDL097C	MAE1	P36013	669 aa	Known RBP	4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 33.9 ms