RNA–Protein interactions for RNA: YCL054W

SPB1, Transcript of AdoMet-dependent methyltransferase, yeast

Gene SPB1, Length 2,526 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPB1	YCL054W	TRM44	Q02648	567 aa	Known RBP	2.69	□□□□□ -1.98
SPB1	YCL054W	MUK1	Q02866	612 aa		2.69	□□□□□ -1.98
SPB1	YCL054W	FIN1	Q03898	291 aa		2.69	□□□□□ -1.98
SPB1	YCL054W	BUD22	Q04347	519 aa	Known RBP	2.69	□□□□□ -1.98
SPB1	YCL054W	THI3	Q07471	609 aa		2.69	□□□□□ -1.98
SPB1	YCL054W	RPS10A	Q08745	105 aa	Predicted RBP	2.69	□□□□□ -1.98
SPB1	YCL054W	REX3	Q12090	404 aa		2.69	□□□□□ -1.98
SPB1	YCL054W	INP53	Q12271	1107 aa		2.69	□□□□□ -1.98
SPB1	YCL054W	SEC39	Q12745	709 aa		2.69	□□□□□ -1.98
SPB1	YCL054W	MF(ALPHA)1	P01149	165 aa		2.69	□□□□□ -1.98
SPB1	YCL054W	TPK2	P06245	380 aa		2.69	□□□□□ -1.98
SPB1	YCL054W	RPL1A	P0CX43	217 aa	Known RBP	2.69	□□□□□ -1.98
SPB1	YCL054W	RPL1B	P0CX44	217 aa	Known RBP	2.69	□□□□□ -1.98
SPB1	YCL054W	WHI2	P12611	486 aa		2.69	□□□□□ -1.98
SPB1	YCL054W	VMA2	P16140	517 aa	Known RBP	2.69	□□□□□ -1.98
SPB1	YCL054W	VMA16	P23968	213 aa		2.69	□□□□□ -1.98
SPB1	YCL054W	KRE2	P27809	442 aa		2.69	□□□□□ -1.98
SPB1	YCL054W	IDH2	P28241	369 aa	Known RBP	2.69	□□□□□ -1.98
SPB1	YCL054W	SIP1	P32578	815 aa		2.69	□□□□□ -1.98
SPB1	YCL054W	TFB1	P32776	642 aa		2.69	□□□□□ -1.98
SPB1	YCL054W	UGP1	P32861	499 aa	Known RBP	2.69	□□□□□ -1.98
SPB1	YCL054W	LAS1	P36146	502 aa	Predicted RBP	2.69	□□□□□ -1.98
SPB1	YCL054W	APE3	P37302	537 aa	Known RBP	2.69	□□□□□ -1.98
SPB1	YCL054W	SIF2	P38262	535 aa		2.69	□□□□□ -1.98
SPB1	YCL054W	RRT2	P38332	387 aa		2.69	□□□□□ -1.98
SPB1	YCL054W	SUL1	P38359	859 aa		2.69	□□□□□ -1.98
SPB1	YCL054W	GND1	P38720	489 aa	Known RBP	2.69	□□□□□ -1.98
SPB1	YCL054W	MTG2	P38860	518 aa		2.69	□□□□□ -1.98
SPB1	YCL054W	LNP1	P38878	278 aa		2.69	□□□□□ -1.98
SPB1	YCL054W	OPT1	P40897	799 aa		2.69	□□□□□ -1.98
SPB1	YCL054W	CAK1	P43568	368 aa	Predicted RBP	2.69	□□□□□ -1.98
SPB1	YCL054W	STB2	P46679	850 aa		2.69	□□□□□ -1.98
SPB1	YCL054W	FYV8	P46949	817 aa	Known RBP	2.69	□□□□□ -1.98
SPB1	YCL054W	VID30	P53076	958 aa		2.69	□□□□□ -1.98
SPB1	YCL054W	TOF1	P53840	1238 aa		2.69	□□□□□ -1.98
SPB1	YCL054W	IPI3	P53877	555 aa		2.69	□□□□□ -1.98
SPB1	YCL054W	YLH47	Q06493	454 aa		2.69	□□□□□ -1.98
SPB1	YCL054W	CRT10	Q08226	957 aa		2.69	□□□□□ -1.98
SPB1	YCL054W	NCE102	Q12207	173 aa	RIP-Chip data	2.69	□□□□□ -1.98	not detected
SPB1	YCL054W	TAF3	Q12297	353 aa		2.69	□□□□□ -1.98
SPB1	YCL054W	ZPS1	Q12512	249 aa		2.69	□□□□□ -1.98
SPB1	YCL054W	ADH7	P25377	361 aa		2.68	□□□□□ -1.98
SPB1	YCL054W	CDC15	P27636	974 aa		2.68	□□□□□ -1.98
SPB1	YCL054W	SEF1	P34228	1148 aa		2.68	□□□□□ -1.98
SPB1	YCL054W	STV1	P37296	890 aa		2.68	□□□□□ -1.98
SPB1	YCL054W	ADE17	P38009	592 aa	Known RBP	2.68	□□□□□ -1.98
SPB1	YCL054W	SPL2	P38839	148 aa		2.68	□□□□□ -1.98
SPB1	YCL054W	KEL1	P38853	1164 aa	Known RBP	2.68	□□□□□ -1.98
SPB1	YCL054W	YMR147W	P40218	223 aa	Known RBP	2.68	□□□□□ -1.98
SPB1	YCL054W	SMC3	P47037	1230 aa		2.68	□□□□□ -1.98
SPB1	YCL054W	CUL3	P53202	744 aa		2.68	□□□□□ -1.98
SPB1	YCL054W	YML122C	Q03207	126 aa		2.68	□□□□□ -1.98
SPB1	YCL054W	YMR160W	Q03823	816 aa		2.68	□□□□□ -1.98
SPB1	YCL054W	CSI1	Q04368	295 aa		2.68	□□□□□ -1.98
SPB1	YCL054W	RNH1	Q04740	348 aa		2.68	□□□□□ -1.98
SPB1	YCL054W	YDL073W	Q07454	984 aa		2.68	□□□□□ -1.98
SPB1	YCL054W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	2.68	□□□□□ -1.98	not detected
SPB1	YCL054W	RRD2	Q12461	358 aa		2.68	□□□□□ -1.98
SPB1	YCL054W	HKR1	P41809	1802 aa		2.68	□□□□□ -1.98
SPB1	YCL054W	SAC3	P46674	1301 aa		2.68	□□□□□ -1.98
SPB1	YCL054W	HPR1	P17629	752 aa	Known RBP	2.68	□□□□□ -1.98
SPB1	YCL054W	MAK32	P23060	363 aa		2.68	□□□□□ -1.98
SPB1	YCL054W	OTU2	P38747	307 aa	Known RBP	2.68	□□□□□ -1.98
SPB1	YCL054W	PCL5	P38794	229 aa		2.68	□□□□□ -1.98
SPB1	YCL054W	EXO1	P39875	702 aa		2.68	□□□□□ -1.98
SPB1	YCL054W	PKP1	P40530	394 aa		2.68	□□□□□ -1.98
SPB1	YCL054W	YJL055W	P47044	245 aa		2.68	□□□□□ -1.98
SPB1	YCL054W	DRN1	P53255	507 aa	Known RBP	2.68	□□□□□ -1.98
SPB1	YCL054W	ALF1	P53904	254 aa		2.68	□□□□□ -1.98
SPB1	YCL054W	NCS2	P53923	493 aa	Predicted RBP	2.68	□□□□□ -1.98
SPB1	YCL054W	PRO2	P54885	456 aa	Known RBP	2.68	□□□□□ -1.98
SPB1	YCL054W	KAP120	Q02932	1032 aa		2.68	□□□□□ -1.98
SPB1	YCL054W	WAR1	Q03631	944 aa		2.68	□□□□□ -1.98
SPB1	YCL054W	PSY3	Q12318	242 aa		2.68	□□□□□ -1.98
SPB1	YCL054W	YDL007C-A	Q2V2Q0	85 aa		2.68	□□□□□ -1.98
SPB1	YCL054W	VPS13	Q07878	3144 aa		2.67	□□□□□ -1.98
SPB1	YCL054W	SUP35	P05453	685 aa	Known RBP	2.67	□□□□□ -1.98
SPB1	YCL054W	ADE5,7	P07244	802 aa	Known RBP	2.67	□□□□□ -1.98
SPB1	YCL054W	RPL3	P14126	387 aa	Known RBP	2.67	□□□□□ -1.98
SPB1	YCL054W	ART10	P18634	518 aa	Known RBP	2.67	□□□□□ -1.98
SPB1	YCL054W	PMA2	P19657	947 aa		2.67	□□□□□ -1.98
SPB1	YCL054W	PTC6	P25646	442 aa		2.67	□□□□□ -1.98
SPB1	YCL054W	PAP1	P29468	568 aa	Known RBP	2.67	□□□□□ -1.98
SPB1	YCL054W	YME2	P32843	850 aa		2.67	□□□□□ -1.98
SPB1	YCL054W	YBL055C	P34220	418 aa	Predicted RBP	2.67	□□□□□ -1.98
SPB1	YCL054W	UIP5	P36137	443 aa		2.67	□□□□□ -1.98
SPB1	YCL054W	YSW1	P38280	609 aa		2.67	□□□□□ -1.98
SPB1	YCL054W	TSC10	P38342	320 aa		2.67	□□□□□ -1.98
SPB1	YCL054W	RFC1	P38630	861 aa	Known RBP	2.67	□□□□□ -1.98
SPB1	YCL054W	ALG5	P40350	334 aa		2.67	□□□□□ -1.98
SPB1	YCL054W	ARG2	P40360	574 aa		2.67	□□□□□ -1.98
SPB1	YCL054W	LAS21	P40367	830 aa		2.67	□□□□□ -1.98
SPB1	YCL054W	UBX6	P47049	396 aa		2.67	□□□□□ -1.98
SPB1	YCL054W	DIA3	P52290	468 aa		2.67	□□□□□ -1.98
SPB1	YCL054W	COG2	P53271	262 aa		2.67	□□□□□ -1.98
SPB1	YCL054W	OGG1	P53397	376 aa	Predicted RBP	2.67	□□□□□ -1.98
SPB1	YCL054W	YNL144C	P53907	740 aa		2.67	□□□□□ -1.98
SPB1	YCL054W	SLG1	P54867	378 aa		2.67	□□□□□ -1.98
SPB1	YCL054W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	2.67	□□□□□ -1.98	not detected
SPB1	YCL054W	SGT2	Q12118	346 aa	Known RBP	2.67	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms