RNA–Protein interactions for RNA: YPL115C

BEM3, Transcript of Rho GTPase activating protein (RhoGAP), yeast

Gene BEM3, Length 3,387 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BEM3	YPL115C	SNU114	P36048	1008 aa	Known RBP	0.8	□□□□□ -2.28
BEM3	YPL115C	SWD3	P38123	315 aa		0.8	□□□□□ -2.28
BEM3	YPL115C	TAF5	P38129	798 aa		0.8	□□□□□ -2.28
BEM3	YPL115C	VPS52	P39904	641 aa		0.8	□□□□□ -2.28
BEM3	YPL115C	YIL161W	P40449	235 aa	Known RBP	0.8	□□□□□ -2.28
BEM3	YPL115C	GCD10	P41814	478 aa		0.8	□□□□□ -2.28
BEM3	YPL115C	DIM1	P41819	318 aa	Known RBP	0.8	□□□□□ -2.28
BEM3	YPL115C	GPD2	P41911	440 aa	Known RBP	0.8	□□□□□ -2.28
BEM3	YPL115C	SHE10	P53075	577 aa		0.8	□□□□□ -2.28
BEM3	YPL115C	DSD1	P53095	428 aa		0.8	□□□□□ -2.28
BEM3	YPL115C	CRZ1	P53968	678 aa		0.8	□□□□□ -2.28
BEM3	YPL115C	TIM10	P87108	93 aa		0.8	□□□□□ -2.28
BEM3	YPL115C	SKG3	Q06315	1026 aa		0.8	□□□□□ -2.28
BEM3	YPL115C	YDL057W	Q07379	328 aa		0.8	□□□□□ -2.28
BEM3	YPL115C	FMP45	Q07651	309 aa		0.8	□□□□□ -2.28
BEM3	YPL115C	SSP2	Q08646	371 aa		0.8	□□□□□ -2.28
BEM3	YPL115C	YLR049C	Q12110	428 aa		0.8	□□□□□ -2.28
BEM3	YPL115C	HSH49	Q99181	213 aa	Predicted RBP	0.8	□□□□□ -2.28
BEM3	YPL115C	SUC2	P00724	532 aa		0.79	□□□□□ -2.28
BEM3	YPL115C	CHS1	P08004	1131 aa		0.79	□□□□□ -2.28
BEM3	YPL115C	RPB2	P08518	1224 aa	Known RBP	0.79	□□□□□ -2.28
BEM3	YPL115C	YCL049C	P25577	312 aa		0.79	□□□□□ -2.28
BEM3	YPL115C	MPE1	P35728	441 aa	Known RBP	0.79	□□□□□ -2.28
BEM3	YPL115C	RRT2	P38332	387 aa		0.79	□□□□□ -2.28
BEM3	YPL115C	FSH1	P38777	243 aa	Known RBP	0.79	□□□□□ -2.28
BEM3	YPL115C	DPH1	P40487	425 aa	Known RBP	0.79	□□□□□ -2.28
BEM3	YPL115C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	0.79	□□□□□ -2.28	not detected
BEM3	YPL115C	SOL4	P53315	255 aa		0.79	□□□□□ -2.28
BEM3	YPL115C	PAP2	P53632	584 aa	Known RBP	0.79	□□□□□ -2.28
BEM3	YPL115C	MHR1	Q06630	226 aa		0.79	□□□□□ -2.28
BEM3	YPL115C	ECM30	Q06673	1274 aa		0.79	□□□□□ -2.28
BEM3	YPL115C	TMC1	Q08422	150 aa	Predicted RBP	0.79	□□□□□ -2.28
BEM3	YPL115C	ERV2	Q12284	196 aa		0.79	□□□□□ -2.28
BEM3	YPL115C	ERG27	Q12452	347 aa	Known RBP	0.79	□□□□□ -2.28
BEM3	YPL115C	RRD2	Q12461	358 aa		0.79	□□□□□ -2.28
BEM3	YPL115C	YIL177C	P40434	1758 aa		0.79	□□□□□ -2.28
BEM3	YPL115C	YJL225C	P40889	1758 aa		0.79	□□□□□ -2.28
BEM3	YPL115C	MET17	P06106	444 aa		0.79	□□□□□ -2.28
BEM3	YPL115C	RAP1	P11938	827 aa		0.79	□□□□□ -2.28
BEM3	YPL115C	ERG8	P24521	451 aa		0.79	□□□□□ -2.28
BEM3	YPL115C	RER1	P25560	188 aa		0.79	□□□□□ -2.28
BEM3	YPL115C	SPC110	P32380	944 aa		0.79	□□□□□ -2.28
BEM3	YPL115C	ALY1	P36117	915 aa		0.79	□□□□□ -2.28
BEM3	YPL115C	ROT2	P38138	954 aa		0.79	□□□□□ -2.28
BEM3	YPL115C	YBL029W	P38201	376 aa		0.79	□□□□□ -2.28
BEM3	YPL115C	RIC1	P40395	1056 aa		0.79	□□□□□ -2.28
BEM3	YPL115C	PTR3	P43606	678 aa		0.79	□□□□□ -2.28
BEM3	YPL115C	CAF130	P53280	1122 aa	Predicted RBP	0.79	□□□□□ -2.28
BEM3	YPL115C	MEP3	P53390	489 aa		0.79	□□□□□ -2.28
BEM3	YPL115C	YLR152C	P54072	576 aa		0.79	□□□□□ -2.28
BEM3	YPL115C	TCO89	Q08921	799 aa		0.79	□□□□□ -2.28
BEM3	YPL115C	MSM1	P22438	575 aa		0.79	□□□□□ -2.28
BEM3	YPL115C	ELO2	P25358	347 aa		0.79	□□□□□ -2.28
BEM3	YPL115C	NAM9	P27929	486 aa		0.79	□□□□□ -2.28
BEM3	YPL115C	KEL1	P38853	1164 aa	Known RBP	0.79	□□□□□ -2.28
BEM3	YPL115C	HAT2	P39984	401 aa		0.79	□□□□□ -2.28
BEM3	YPL115C	YMR147W	P40218	223 aa	Known RBP	0.79	□□□□□ -2.28
BEM3	YPL115C	TDA7	P53882	636 aa	Predicted RBP	0.79	□□□□□ -2.28
BEM3	YPL115C	RHO4	Q00246	291 aa		0.79	□□□□□ -2.28
BEM3	YPL115C	YML037C	Q03703	340 aa		0.79	□□□□□ -2.28
BEM3	YPL115C	YDR239C	Q03780	787 aa		0.79	□□□□□ -2.28
BEM3	YPL115C	MFB1	Q04922	465 aa		0.79	□□□□□ -2.28
BEM3	YPL115C	RDR1	Q08904	546 aa		0.79	□□□□□ -2.28
BEM3	YPL115C	ADH2	P00331	348 aa	Known RBP	0.78	□□□□□ -2.28
BEM3	YPL115C	SNF3	P10870	884 aa		0.78	□□□□□ -2.28
BEM3	YPL115C	KAR3	P17119	729 aa		0.78	□□□□□ -2.28
BEM3	YPL115C	PPH22	P23595	377 aa		0.78	□□□□□ -2.28
BEM3	YPL115C	MDM31	P38880	579 aa		0.78	□□□□□ -2.28
BEM3	YPL115C	SEC24	P40482	926 aa	Known RBP	0.78	□□□□□ -2.28
BEM3	YPL115C	SIP4	P46954	829 aa		0.78	□□□□□ -2.28
BEM3	YPL115C	IKS1	P47042	667 aa		0.78	□□□□□ -2.28
BEM3	YPL115C	YGR021W	P53212	290 aa		0.78	□□□□□ -2.28
BEM3	YPL115C	DCP2	P53550	970 aa	Known RBP	0.78	□□□□□ -2.28
BEM3	YPL115C	INA17	Q02888	182 aa		0.78	□□□□□ -2.28
BEM3	YPL115C	YKU80	Q04437	629 aa		0.78	□□□□□ -2.28
BEM3	YPL115C	YBR126W-A	Q8TGU7	68 aa		0.78	□□□□□ -2.28
BEM3	YPL115C	CDC25	P04821	1589 aa		0.78	□□□□□ -2.28
BEM3	YPL115C	RKR1	Q04781	1562 aa		0.78	□□□□□ -2.28
BEM3	YPL115C	SNF1	P06782	633 aa	Known RBP	0.78	□□□□□ -2.28
BEM3	YPL115C	PUT2	P07275	575 aa		0.78	□□□□□ -2.28
BEM3	YPL115C	LHS1	P36016	881 aa		0.78	□□□□□ -2.28
BEM3	YPL115C	TSC10	P38342	320 aa		0.78	□□□□□ -2.28
BEM3	YPL115C	YJR061W	P40355	935 aa		0.78	□□□□□ -2.28
BEM3	YPL115C	RRT5	P43607	289 aa		0.78	□□□□□ -2.28
BEM3	YPL115C	BUD32	P53323	261 aa		0.78	□□□□□ -2.28
BEM3	YPL115C	MDM1	Q01846	1127 aa		0.78	□□□□□ -2.28
BEM3	YPL115C	DPB4	Q04603	196 aa	Known RBP	0.78	□□□□□ -2.28
BEM3	YPL115C	COG4	Q06096	861 aa		0.78	□□□□□ -2.28
BEM3	YPL115C	SYO1	Q07395	620 aa		0.78	□□□□□ -2.28
BEM3	YPL115C	PPT2	Q12036	173 aa		0.78	□□□□□ -2.28
BEM3	YPL115C	YOL087C	Q99247	1116 aa		0.78	□□□□□ -2.28
BEM3	YPL115C	IDH2	P28241	369 aa	Known RBP	0.77	□□□□□ -2.29
BEM3	YPL115C	CBF2	P32504	956 aa		0.77	□□□□□ -2.29
BEM3	YPL115C	ECM15	P35195	104 aa		0.77	□□□□□ -2.29
BEM3	YPL115C	ACA1	P39970	489 aa		0.77	□□□□□ -2.29
BEM3	YPL115C	YJL213W	P40896	331 aa		0.77	□□□□□ -2.29
BEM3	YPL115C	IGO1	P53897	168 aa		0.77	□□□□□ -2.29
BEM3	YPL115C	SAM50	P53969	484 aa		0.77	□□□□□ -2.29
BEM3	YPL115C	YPL014W	Q02606	381 aa		0.77	□□□□□ -2.29
BEM3	YPL115C	MUB1	Q03162	620 aa		0.77	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms