RNA–Protein interactions for RNA: YOL013C

HRD1, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene HRD1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD1YOL013C YME1P32795 747 aa3.34□□□□□ -1.87
HRD1YOL013C SRB2P34162 210 aa3.34□□□□□ -1.87
HRD1YOL013C MRPL40P36534 297 aa3.34□□□□□ -1.87
HRD1YOL013C PIH1P38768 344 aa3.34□□□□□ -1.87
HRD1YOL013C WSS1P38838 269 aa3.34□□□□□ -1.87
HRD1YOL013C SEC31P38968 1273 aaKnown RBP3.34□□□□□ -1.87
HRD1YOL013C VID30P53076 958 aa3.34□□□□□ -1.87
HRD1YOL013C MLC1P53141 149 aa3.34□□□□□ -1.87
HRD1YOL013C MAK10Q02197 733 aa3.34□□□□□ -1.87
HRD1YOL013C VTC3Q02725 835 aa3.34□□□□□ -1.87
HRD1YOL013C RRN5Q02983 363 aa3.34□□□□□ -1.87
HRD1YOL013C PPM1Q04081 328 aa3.34□□□□□ -1.87
HRD1YOL013C CRN1Q06440 651 aa3.34□□□□□ -1.87
HRD1YOL013C DNA2P38859 1522 aa3.34□□□□□ -1.87
HRD1YOL013C XRN1P22147 1528 aaKnown RBP3.33□□□□□ -1.88
HRD1YOL013C QCR6P00127 147 aa3.33□□□□□ -1.88
HRD1YOL013C PRD1P25375 712 aa3.33□□□□□ -1.88
HRD1YOL013C PDB1P32473 366 aaKnown RBP3.33□□□□□ -1.88
HRD1YOL013C EBP2P36049 427 aaKnown RBP3.33□□□□□ -1.88
HRD1YOL013C TUL1P36096 758 aa3.33□□□□□ -1.88
HRD1YOL013C PFF1P38244 976 aa3.33□□□□□ -1.88
HRD1YOL013C BUR6P40096 142 aa3.33□□□□□ -1.88
HRD1YOL013C YIL089WP40500 205 aa3.33□□□□□ -1.88
HRD1YOL013C ALK1P43633 760 aaKnown RBP3.33□□□□□ -1.88
HRD1YOL013C CPR8P53728 308 aa3.33□□□□□ -1.88
HRD1YOL013C YNL143CP53908 130 aa3.33□□□□□ -1.88
HRD1YOL013C AQR1P53943 586 aa3.33□□□□□ -1.88
HRD1YOL013C BOP3P53958 396 aa3.33□□□□□ -1.88
HRD1YOL013C YAT1P80235 687 aa3.33□□□□□ -1.88
HRD1YOL013C TRS23Q03784 219 aa3.33□□□□□ -1.88
HRD1YOL013C RIM13Q03792 727 aa3.33□□□□□ -1.88
HRD1YOL013C MGR3Q04472 501 aa3.33□□□□□ -1.88
HRD1YOL013C YOL159CQ08300 171 aa3.33□□□□□ -1.88
HRD1YOL013C COX1P00401 534 aa3.33□□□□□ -1.88
HRD1YOL013C ERG11P10614 530 aa3.33□□□□□ -1.88
HRD1YOL013C ELO2P25358 347 aa3.33□□□□□ -1.88
HRD1YOL013C IDH2P28241 369 aaKnown RBP3.33□□□□□ -1.88
HRD1YOL013C AFG1P32317 509 aa3.33□□□□□ -1.88
HRD1YOL013C AGP2P38090 596 aa3.33□□□□□ -1.88
HRD1YOL013C HSM3P38348 480 aa3.33□□□□□ -1.88
HRD1YOL013C MLH1P38920 769 aa3.33□□□□□ -1.88
HRD1YOL013C VPS45P38932 577 aa3.33□□□□□ -1.88
HRD1YOL013C ECM27P47144 725 aa3.33□□□□□ -1.88
HRD1YOL013C APT1P49435 187 aaKnown RBP3.33□□□□□ -1.88
HRD1YOL013C YGL117WP53133 265 aa3.33□□□□□ -1.88
HRD1YOL013C RSM28Q03430 361 aa3.33□□□□□ -1.88
HRD1YOL013C ACL4Q03771 387 aa3.33□□□□□ -1.88
HRD1YOL013C MRPL1Q04599 285 aa3.33□□□□□ -1.88
HRD1YOL013C ARG7Q04728 441 aa3.33□□□□□ -1.88
HRD1YOL013C VTA1Q06263 330 aa3.33□□□□□ -1.88
HRD1YOL013C RRT8Q08219 342 aa3.33□□□□□ -1.88
HRD1YOL013C FMP40Q08968 688 aaPredicted RBP3.33□□□□□ -1.88
HRD1YOL013C PFK27Q12471 397 aaPredicted RBP3.33□□□□□ -1.88
HRD1YOL013C AI5_ALPHAQ9ZZX1 630 aa3.33□□□□□ -1.88
HRD1YOL013C GAL7P08431 366 aa3.32□□□□□ -1.88
HRD1YOL013C PET123P17558 318 aa3.32□□□□□ -1.88
HRD1YOL013C HNM1P19807 563 aa3.32□□□□□ -1.88
HRD1YOL013C VMA16P23968 213 aa3.32□□□□□ -1.88
HRD1YOL013C YBL055CP34220 418 aaPredicted RBP3.32□□□□□ -1.88
HRD1YOL013C MIC60P36112 540 aa3.32□□□□□ -1.88
HRD1YOL013C SDH8P38345 138 aa3.32□□□□□ -1.88
HRD1YOL013C YNG2P38806 282 aaKnown RBP3.32□□□□□ -1.88
HRD1YOL013C FAD1P38913 306 aa3.32□□□□□ -1.88
HRD1YOL013C YTA12P40341 825 aa3.32□□□□□ -1.88
HRD1YOL013C ALG5P40350 334 aa3.32□□□□□ -1.88
HRD1YOL013C ELP2P42935 788 aa3.32□□□□□ -1.88
HRD1YOL013C NPA3P47122 385 aa3.32□□□□□ -1.88
HRD1YOL013C KTR5P53966 522 aaPredicted RBP3.32□□□□□ -1.88
HRD1YOL013C MFM1Q02783 413 aa3.32□□□□□ -1.88
HRD1YOL013C TAP42Q04372 366 aa3.32□□□□□ -1.88
HRD1YOL013C ECM18Q04623 453 aa3.32□□□□□ -1.88
HRD1YOL013C MSC3Q05812 728 aa3.32□□□□□ -1.88
HRD1YOL013C YPR172WQ06608 200 aa3.32□□□□□ -1.88
HRD1YOL013C FRE3Q08905 711 aa3.32□□□□□ -1.88
HRD1YOL013C YPL216WQ08964 1102 aa3.32□□□□□ -1.88
HRD1YOL013C SEC39Q12745 709 aa3.32□□□□□ -1.88
HRD1YOL013C YBR255C-AQ3E776 120 aa3.32□□□□□ -1.88
HRD1YOL013C YER175W-AQ8TGU4 54 aa3.32□□□□□ -1.88
HRD1YOL013C PGK1P00560 416 aaKnown RBP3.31□□□□□ -1.88
HRD1YOL013C MF(ALPHA)1P01149 165 aa3.31□□□□□ -1.88
HRD1YOL013C STE3P06783 470 aa3.31□□□□□ -1.88
HRD1YOL013C TAL1P15019 335 aaKnown RBP3.31□□□□□ -1.88
HRD1YOL013C PUT4P15380 627 aa3.31□□□□□ -1.88
HRD1YOL013C SRP54P20424 541 aaKnown RBP3.31□□□□□ -1.88
HRD1YOL013C PDE1P22434 369 aa3.31□□□□□ -1.88
HRD1YOL013C AMD2P22580 549 aa3.31□□□□□ -1.88
HRD1YOL013C RRP43P25359 394 aaPredicted RBP3.31□□□□□ -1.88
HRD1YOL013C YIM1P28625 365 aa3.31□□□□□ -1.88
HRD1YOL013C RPT5P33297 434 aaKnown RBP3.31□□□□□ -1.88
HRD1YOL013C HCS1P34243 683 aa3.31□□□□□ -1.88
HRD1YOL013C YUH1P35127 236 aa3.31□□□□□ -1.88
HRD1YOL013C NTR2P36118 322 aaPredicted RBP3.31□□□□□ -1.88
HRD1YOL013C CTM1P38818 585 aa3.31□□□□□ -1.88
HRD1YOL013C YJL132WP47014 750 aa3.31□□□□□ -1.88
HRD1YOL013C TAX4P47030 604 aa3.31□□□□□ -1.88
HRD1YOL013C NET1P47035 1189 aa3.31□□□□□ -1.88
HRD1YOL013C BPL1P48445 690 aaPredicted RBP3.31□□□□□ -1.88
HRD1YOL013C NUP84P52891 726 aa3.31□□□□□ -1.88
HRD1YOL013C YIP4P53093 235 aa3.31□□□□□ -1.88
HRD1YOL013C YNL092WP53934 400 aa3.31□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 33.2 ms