RNA–Protein interactions for RNA: YJR102C

VPS25, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS25, Length 609 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS25YJR102C YPL014WQ02606 381 aa3.87□□□□□ -1.79
VPS25YJR102C COG4Q06096 861 aa3.87□□□□□ -1.79
VPS25YJR102C GRS2Q06817 618 aa3.87□□□□□ -1.79
VPS25YJR102C YJR112W-AQ3E743 109 aa3.87□□□□□ -1.79
VPS25YJR102C BAR1P12630 587 aa3.86□□□□□ -1.79
VPS25YJR102C PDA1P16387 420 aaKnown RBP3.86□□□□□ -1.79
VPS25YJR102C RPN2P32565 945 aaKnown RBP3.86□□□□□ -1.79
VPS25YJR102C TIF3P34167 436 aaKnown RBP3.86□□□□□ -1.79
VPS25YJR102C NDE1P40215 560 aa3.86□□□□□ -1.79
VPS25YJR102C APT1P49435 187 aaKnown RBP3.86□□□□□ -1.79
VPS25YJR102C SCS3P53012 380 aa3.86□□□□□ -1.79
VPS25YJR102C YGL082WP53155 381 aa3.86□□□□□ -1.79
VPS25YJR102C RBG2P53295 368 aaKnown RBP3.86□□□□□ -1.79
VPS25YJR102C SHR3Q02774 210 aa3.86□□□□□ -1.79
VPS25YJR102C MSS11Q03825 758 aa3.86□□□□□ -1.79
VPS25YJR102C VPS38Q05919 439 aa3.86□□□□□ -1.79
VPS25YJR102C GAL80P04387 435 aa3.85□□□□□ -1.79
VPS25YJR102C TCD2P36101 447 aaKnown RBP3.85□□□□□ -1.79
VPS25YJR102C YKL023WP36103 277 aaKnown RBP3.85□□□□□ -1.79
VPS25YJR102C ERP2P39704 215 aa3.85□□□□□ -1.79
VPS25YJR102C YND1P40009 630 aa3.85□□□□□ -1.79
VPS25YJR102C ATG27P46989 271 aa3.85□□□□□ -1.79
VPS25YJR102C ARE2P53629 642 aaKnown RBP3.85□□□□□ -1.79
VPS25YJR102C TDA7P53882 636 aaPredicted RBP3.85□□□□□ -1.79
VPS25YJR102C MSC1Q03104 513 aa3.85□□□□□ -1.79
VPS25YJR102C TDA9Q04545 1251 aa3.85□□□□□ -1.79
VPS25YJR102C DIC1Q06143 298 aa3.85□□□□□ -1.79
VPS25YJR102C IMH1Q06704 911 aaKnown RBP3.85□□□□□ -1.79
VPS25YJR102C RLM1Q12224 676 aa3.85□□□□□ -1.79
VPS25YJR102C ARP6Q12509 438 aa3.85□□□□□ -1.79
VPS25YJR102C FOB1O13329 566 aa3.84□□□□□ -1.79
VPS25YJR102C INH1P01097 85 aa3.84□□□□□ -1.79
VPS25YJR102C MRP7P12687 371 aa3.84□□□□□ -1.79
VPS25YJR102C GLN3P18494 730 aa3.84□□□□□ -1.79
VPS25YJR102C TYR1P20049 452 aa3.84□□□□□ -1.79
VPS25YJR102C OCA4P25366 362 aa3.84□□□□□ -1.79
VPS25YJR102C ERG1P32476 496 aaKnown RBP3.84□□□□□ -1.79
VPS25YJR102C YME1P32795 747 aa3.84□□□□□ -1.79
VPS25YJR102C YNK1P36010 153 aaKnown RBP3.84□□□□□ -1.79
VPS25YJR102C YIR014WP40570 242 aa3.84□□□□□ -1.79
VPS25YJR102C GLO2Q05584 274 aa3.84□□□□□ -1.79
VPS25YJR102C TSR2Q06672 205 aaKnown RBP3.84□□□□□ -1.79
VPS25YJR102C SDH5Q08230 162 aa3.84□□□□□ -1.79
VPS25YJR102C AVL9Q12500 764 aa3.84□□□□□ -1.79
VPS25YJR102C PEP5P12868 1029 aa3.83□□□□□ -1.8
VPS25YJR102C RPS2P25443 254 aaKnown RBP3.83□□□□□ -1.8
VPS25YJR102C ACH1P32316 526 aa3.83□□□□□ -1.8
VPS25YJR102C GCS1P35197 352 aa3.83□□□□□ -1.8
VPS25YJR102C MSR1P38714 643 aa3.83□□□□□ -1.8
VPS25YJR102C NPR2P39923 615 aa3.83□□□□□ -1.8
VPS25YJR102C YJL068CP40363 299 aa3.83□□□□□ -1.8
VPS25YJR102C ARF3P40994 183 aaRIP-Chip data3.83□□□□□ -1.8not detected
VPS25YJR102C BUD32P53323 261 aa3.83□□□□□ -1.8
VPS25YJR102C YDR239CQ03780 787 aa3.83□□□□□ -1.8
VPS25YJR102C COQ9Q05779 260 aa3.83□□□□□ -1.8
VPS25YJR102C NRT1Q08485 598 aa3.83□□□□□ -1.8
VPS25YJR102C PDH1Q12428 516 aaKnown RBP3.83□□□□□ -1.8
VPS25YJR102C HSH49Q99181 213 aaPredicted RBP3.83□□□□□ -1.8
VPS25YJR102C ARG3P05150 338 aa3.82□□□□□ -1.8
VPS25YJR102C DFR1P07807 211 aaKnown RBP RIP-Chip data3.82□□□□□ -1.8not detected
VPS25YJR102C HSC82P15108 705 aaKnown RBP3.82□□□□□ -1.8
VPS25YJR102C SEC62P21825 274 aa3.82□□□□□ -1.8
VPS25YJR102C PPZ1P26570 692 aa3.82□□□□□ -1.8
VPS25YJR102C PAP1P29468 568 aaKnown RBP3.82□□□□□ -1.8
VPS25YJR102C SPC34P36131 295 aa3.82□□□□□ -1.8
VPS25YJR102C RIM2P38127 377 aa3.82□□□□□ -1.8
VPS25YJR102C YAT2P40017 923 aa3.82□□□□□ -1.8
VPS25YJR102C SPO22P40511 975 aa3.82□□□□□ -1.8
VPS25YJR102C CUL3P53202 744 aa3.82□□□□□ -1.8
VPS25YJR102C TOF2Q02208 771 aa3.82□□□□□ -1.8
VPS25YJR102C RPC11Q04307 110 aaPredicted RBP3.82□□□□□ -1.8
VPS25YJR102C THP1Q08231 455 aa3.82□□□□□ -1.8
VPS25YJR102C TIP41Q12199 356 aa3.82□□□□□ -1.8
VPS25YJR102C YML133CQ03099 1374 aa3.81□□□□□ -1.8
VPS25YJR102C YLL067CQ07888 1374 aa3.81□□□□□ -1.8
VPS25YJR102C YLL066CQ99208 1374 aa3.81□□□□□ -1.8
VPS25YJR102C VPS17P32913 551 aa3.81□□□□□ -1.8
VPS25YJR102C CST26P38226 397 aa3.81□□□□□ -1.8
VPS25YJR102C YER130CP39959 443 aa3.81□□□□□ -1.8
VPS25YJR102C YEL057CP39983 233 aa3.81□□□□□ -1.8
VPS25YJR102C PET130P47065 347 aa3.81□□□□□ -1.8
VPS25YJR102C RHO4Q00246 291 aa3.81□□□□□ -1.8
VPS25YJR102C RBA50Q04418 439 aa3.81□□□□□ -1.8
VPS25YJR102C YEH2Q07950 538 aa3.81□□□□□ -1.8
VPS25YJR102C WBP1P33767 430 aaKnown RBP3.8□□□□□ -1.8
VPS25YJR102C ESL1P40456 1118 aa3.8□□□□□ -1.8
VPS25YJR102C MEP2P41948 499 aa3.8□□□□□ -1.8
VPS25YJR102C ALK1P43633 760 aaKnown RBP3.8□□□□□ -1.8
VPS25YJR102C CAF130P53280 1122 aaPredicted RBP3.8□□□□□ -1.8
VPS25YJR102C SAM50P53969 484 aa3.8□□□□□ -1.8
VPS25YJR102C MDM1Q01846 1127 aa3.8□□□□□ -1.8
VPS25YJR102C FIN1Q03898 291 aa3.8□□□□□ -1.8
VPS25YJR102C NCE102Q12207 173 aaRIP-Chip data3.8□□□□□ -1.8not detected
VPS25YJR102C SGV1P23293 657 aaKnown RBP3.79□□□□□ -1.8
VPS25YJR102C SHP1P34223 423 aa3.79□□□□□ -1.8
VPS25YJR102C ECM15P35195 104 aa3.79□□□□□ -1.8
VPS25YJR102C BNA4P38169 460 aa3.79□□□□□ -1.8
VPS25YJR102C YHR210CP38893 341 aa3.79□□□□□ -1.8
VPS25YJR102C GUF1P46943 645 aa3.79□□□□□ -1.8
VPS25YJR102C IKS1P47042 667 aa3.79□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms