RNA–Protein interactions for RNA: YHR012W

VPS29, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS29, Length 849 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS29YHR012W YAR066WP0CX18 203 aa4.73□□□□□ -1.65
VPS29YHR012W YHR214WP0CX19 203 aa4.73□□□□□ -1.65
VPS29YHR012W GPA2P10823 449 aa4.73□□□□□ -1.65
VPS29YHR012W MET8P15807 274 aa4.73□□□□□ -1.65
VPS29YHR012W URA4P20051 364 aa4.73□□□□□ -1.65
VPS29YHR012W PRI2P20457 528 aa4.73□□□□□ -1.65
VPS29YHR012W YCR006CP25350 157 aa4.73□□□□□ -1.65
VPS29YHR012W SIN4P32259 974 aa4.73□□□□□ -1.65
VPS29YHR012W ATP11P32453 318 aa4.73□□□□□ -1.65
VPS29YHR012W MEI5P32489 222 aa4.73□□□□□ -1.65
VPS29YHR012W LST4P34239 828 aa4.73□□□□□ -1.65
VPS29YHR012W THI80P35202 319 aa4.73□□□□□ -1.65
VPS29YHR012W YHR127WP38833 243 aaKnown RBP4.73□□□□□ -1.65
VPS29YHR012W MNN1P39106 762 aa4.73□□□□□ -1.65
VPS29YHR012W UTP18P40362 594 aaPredicted RBP4.73□□□□□ -1.65
VPS29YHR012W NDC80P40460 691 aa4.73□□□□□ -1.65
VPS29YHR012W SEC28P40509 296 aaKnown RBP4.73□□□□□ -1.65
VPS29YHR012W ELP2P42935 788 aa4.73□□□□□ -1.65
VPS29YHR012W TRM9P49957 279 aa4.73□□□□□ -1.65
VPS29YHR012W PAN2P53010 1115 aaPredicted RBP4.73□□□□□ -1.65
VPS29YHR012W COS12P53053 380 aa4.73□□□□□ -1.65
VPS29YHR012W BOP3P53958 396 aa4.73□□□□□ -1.65
VPS29YHR012W ECM9Q02202 377 aa4.73□□□□□ -1.65
VPS29YHR012W PEX25Q02969 394 aa4.73□□□□□ -1.65
VPS29YHR012W TPP1Q03796 238 aa4.73□□□□□ -1.65
VPS29YHR012W MTQ2Q03920 221 aaPredicted RBP4.73□□□□□ -1.65
VPS29YHR012W SML1Q04964 104 aa4.73□□□□□ -1.65
VPS29YHR012W NUS1Q12063 375 aa4.73□□□□□ -1.65
VPS29YHR012W HRP1Q99383 534 aaKnown RBP4.73□□□□□ -1.65
VPS29YHR012W YPT1P01123 206 aaKnown RBP4.72□□□□□ -1.65
VPS29YHR012W GCR1P07261 785 aa4.72□□□□□ -1.65
VPS29YHR012W FUM1P08417 488 aaKnown RBP4.72□□□□□ -1.65
VPS29YHR012W SPS1P08458 490 aa4.72□□□□□ -1.65
VPS29YHR012W ERG20P08524 352 aaKnown RBP4.72□□□□□ -1.65
VPS29YHR012W CDC26P14724 124 aa4.72□□□□□ -1.65
VPS29YHR012W TYR1P20049 452 aa4.72□□□□□ -1.65
VPS29YHR012W BUD14P27637 709 aa4.72□□□□□ -1.65
VPS29YHR012W MCM5P29496 775 aaKnown RBP4.72□□□□□ -1.65
VPS29YHR012W RIM1P32445 135 aaKnown RBP4.72□□□□□ -1.65
VPS29YHR012W GCD6P32501 712 aaKnown RBP4.72□□□□□ -1.65
VPS29YHR012W SFA1P32771 386 aa4.72□□□□□ -1.65
VPS29YHR012W MGM101P32787 269 aaKnown RBP4.72□□□□□ -1.65
VPS29YHR012W RPC37P36121 282 aa4.72□□□□□ -1.65
VPS29YHR012W PBP2P38151 413 aaKnown RBP RIP-Chip data4.72□□□□□ -1.65not detected
VPS29YHR012W OLA1P38219 394 aaKnown RBP4.72□□□□□ -1.65
VPS29YHR012W EHT1P38295 451 aa4.72□□□□□ -1.65
VPS29YHR012W UBA4P38820 440 aa4.72□□□□□ -1.65
VPS29YHR012W CCT4P39078 528 aaKnown RBP4.72□□□□□ -1.65
VPS29YHR012W MGS1P40151 587 aa4.72□□□□□ -1.65
VPS29YHR012W NDE1P40215 560 aa4.72□□□□□ -1.65
VPS29YHR012W JSN1P47135 1091 aaKnown RBP RIP-Chip data4.72□□□□□ -1.65not detected
VPS29YHR012W MDM34P53083 459 aa4.72□□□□□ -1.65
VPS29YHR012W NNF2P53253 936 aa4.72□□□□□ -1.65
VPS29YHR012W SED5Q01590 340 aa4.72□□□□□ -1.65
VPS29YHR012W YMR034CQ05131 434 aaPredicted RBP4.72□□□□□ -1.65
VPS29YHR012W CDC123Q05791 360 aa4.72□□□□□ -1.65
VPS29YHR012W RSC2Q06488 889 aa4.72□□□□□ -1.65
VPS29YHR012W SLD7Q08457 257 aa4.72□□□□□ -1.65
VPS29YHR012W MCA1Q08601 432 aa4.72□□□□□ -1.65
VPS29YHR012W YPL272CQ08984 517 aa4.72□□□□□ -1.65
VPS29YHR012W YDR056CQ12025 205 aa4.72□□□□□ -1.65
VPS29YHR012W ATG29Q12092 213 aa4.72□□□□□ -1.65
VPS29YHR012W MSL5Q12186 476 aaKnown RBP RIP-Chip data4.72□□□□□ -1.65not detected
VPS29YHR012W YPL066WQ12194 479 aa4.72□□□□□ -1.65
VPS29YHR012W RMD5Q12508 421 aa4.72□□□□□ -1.65
VPS29YHR012W CMD1P06787 147 aaKnown RBP4.71□□□□□ -1.66
VPS29YHR012W PRP2P20095 876 aaPredicted RBP4.71□□□□□ -1.66
VPS29YHR012W RPB4P20433 221 aaPredicted RBP4.71□□□□□ -1.66
VPS29YHR012W ARG1P22768 420 aa4.71□□□□□ -1.66
VPS29YHR012W HRR25P29295 494 aaKnown RBP4.71□□□□□ -1.66
VPS29YHR012W TPS2P31688 896 aaKnown RBP4.71□□□□□ -1.66
VPS29YHR012W PRO1P32264 428 aa4.71□□□□□ -1.66
VPS29YHR012W CAB3P36076 571 aa4.71□□□□□ -1.66
VPS29YHR012W BYE1P36106 594 aa4.71□□□□□ -1.66
VPS29YHR012W FTH1P38310 465 aa4.71□□□□□ -1.66
VPS29YHR012W YHR112CP38716 378 aa4.71□□□□□ -1.66
VPS29YHR012W EFM1P38732 585 aa4.71□□□□□ -1.66
VPS29YHR012W CHS7P38843 316 aa4.71□□□□□ -1.66
VPS29YHR012W MPT5P39016 859 aaKnown RBP RIP-Chip data4.71□□□□□ -1.66not detected
VPS29YHR012W MEF2P39677 819 aa4.71□□□□□ -1.66
VPS29YHR012W YER034WP40022 185 aaKnown RBP4.71□□□□□ -1.66
VPS29YHR012W YIL086CP40503 102 aa4.71□□□□□ -1.66
VPS29YHR012W MNT3P40549 630 aa4.71□□□□□ -1.66
VPS29YHR012W IBA57P47158 497 aa4.71□□□□□ -1.66
VPS29YHR012W YJR149WP47177 404 aa4.71□□□□□ -1.66
VPS29YHR012W BOL2P53082 120 aa4.71□□□□□ -1.66
VPS29YHR012W YGR012WP53206 393 aa4.71□□□□□ -1.66
VPS29YHR012W CLD1P53264 445 aa4.71□□□□□ -1.66
VPS29YHR012W CTK1Q03957 528 aaKnown RBP4.71□□□□□ -1.66
VPS29YHR012W VTI1Q04338 217 aa4.71□□□□□ -1.66
VPS29YHR012W YMR027WQ04371 470 aa4.71□□□□□ -1.66
VPS29YHR012W BCH1Q05029 724 aa4.71□□□□□ -1.66
VPS29YHR012W GIC2Q06648 383 aa4.71□□□□□ -1.66
VPS29YHR012W CDA2Q06703 312 aa4.71□□□□□ -1.66
VPS29YHR012W RIO1Q12196 484 aaKnown RBP4.71□□□□□ -1.66
VPS29YHR012W YOR114WQ12219 294 aa4.71□□□□□ -1.66
VPS29YHR012W FAS1P07149 2051 aaKnown RBP4.7□□□□□ -1.66
VPS29YHR012W STE2D6VTK4 431 aa4.7□□□□□ -1.66
VPS29YHR012W PEP5P12868 1029 aa4.7□□□□□ -1.66
VPS29YHR012W HSP26P15992 214 aaKnown RBP RIP-Chip data4.7□□□□□ -1.66not detected
Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms