RNA–Protein interactions for RNA: YGR006W

PRP18, Transcript of Splicing factor and component of snRNP U5, yeastyeast

Gene PRP18, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP18YGR006W CKA1P15790 372 aa3.87□□□□□ -1.79
PRP18YGR006W PRD1P25375 712 aa3.87□□□□□ -1.79
PRP18YGR006W MCM4P30665 933 aaKnown RBP3.87□□□□□ -1.79
PRP18YGR006W PHD1P36093 366 aa3.87□□□□□ -1.79
PRP18YGR006W RKM3P38222 552 aa3.87□□□□□ -1.79
PRP18YGR006W ARC40P38328 384 aaKnown RBP3.87□□□□□ -1.79
PRP18YGR006W ERG7P38604 731 aa3.87□□□□□ -1.79
PRP18YGR006W SGN1P40561 250 aaKnown RBP RIP-Chip data3.87□□□□□ -1.79not detected
PRP18YGR006W ROK1P45818 564 aaPredicted RBP3.87□□□□□ -1.79
PRP18YGR006W SNG1P46950 547 aa3.87□□□□□ -1.79
PRP18YGR006W SMM1P53720 384 aaKnown RBP3.87□□□□□ -1.79
PRP18YGR006W YVH1Q02256 364 aaKnown RBP3.87□□□□□ -1.79
PRP18YGR006W YMR034CQ05131 434 aaPredicted RBP3.87□□□□□ -1.79
PRP18YGR006W YLR352WQ06479 807 aa3.87□□□□□ -1.79
PRP18YGR006W YAP7Q08182 245 aa3.87□□□□□ -1.79
PRP18YGR006W SRL1Q08673 210 aa3.87□□□□□ -1.79
PRP18YGR006W RLM1Q12224 676 aa3.87□□□□□ -1.79
PRP18YGR006W PEP5P12868 1029 aa3.86□□□□□ -1.79
PRP18YGR006W MGR1P25573 417 aa3.86□□□□□ -1.79
PRP18YGR006W PAP1P29468 568 aaKnown RBP3.86□□□□□ -1.79
PRP18YGR006W YME1P32795 747 aa3.86□□□□□ -1.79
PRP18YGR006W MRE11P32829 692 aa3.86□□□□□ -1.79
PRP18YGR006W WBP1P33767 430 aaKnown RBP3.86□□□□□ -1.79
PRP18YGR006W MIC60P36112 540 aa3.86□□□□□ -1.79
PRP18YGR006W CST26P38226 397 aa3.86□□□□□ -1.79
PRP18YGR006W VID24P38263 362 aa3.86□□□□□ -1.79
PRP18YGR006W MSR1P38714 643 aa3.86□□□□□ -1.79
PRP18YGR006W YEL057CP39983 233 aa3.86□□□□□ -1.79
PRP18YGR006W DOT5P40553 215 aa3.86□□□□□ -1.79
PRP18YGR006W ALK1P43633 760 aaKnown RBP3.86□□□□□ -1.79
PRP18YGR006W PET130P47065 347 aa3.86□□□□□ -1.79
PRP18YGR006W TOF2Q02208 771 aa3.86□□□□□ -1.79
PRP18YGR006W SHR3Q02774 210 aa3.86□□□□□ -1.79
PRP18YGR006W APL5Q08951 932 aaKnown RBP3.86□□□□□ -1.79
PRP18YGR006W RPN2P32565 945 aaKnown RBP3.85□□□□□ -1.79
PRP18YGR006W RAD24P32641 659 aa3.85□□□□□ -1.79
PRP18YGR006W EFM2P38347 419 aa3.85□□□□□ -1.79
PRP18YGR006W RRP3P38712 501 aaKnown RBP3.85□□□□□ -1.79
PRP18YGR006W YHR210CP38893 341 aa3.85□□□□□ -1.79
PRP18YGR006W MET30P39014 640 aa3.85□□□□□ -1.79
PRP18YGR006W YIL169CP40442 995 aa3.85□□□□□ -1.79
PRP18YGR006W MET18P40469 1032 aa3.85□□□□□ -1.79
PRP18YGR006W SNM1P40993 198 aa3.85□□□□□ -1.79
PRP18YGR006W TES1P41903 349 aaKnown RBP3.85□□□□□ -1.79
PRP18YGR006W FET5P43561 622 aa3.85□□□□□ -1.79
PRP18YGR006W TWF1P53250 332 aa3.85□□□□□ -1.79
PRP18YGR006W YDR239CQ03780 787 aa3.85□□□□□ -1.79
PRP18YGR006W NUP53Q03790 475 aa3.85□□□□□ -1.79
PRP18YGR006W SPC19Q03954 165 aa3.85□□□□□ -1.79
PRP18YGR006W TAF11Q04226 346 aa3.85□□□□□ -1.79
PRP18YGR006W YLR287CQ05881 355 aa3.85□□□□□ -1.79
PRP18YGR006W YDL057WQ07379 328 aa3.85□□□□□ -1.79
PRP18YGR006W RIM20Q12033 661 aa3.85□□□□□ -1.79
PRP18YGR006W SCM3Q12334 223 aa3.85□□□□□ -1.79
PRP18YGR006W SEC39Q12745 709 aa3.85□□□□□ -1.79
PRP18YGR006W RED1P14291 827 aa3.84□□□□□ -1.79
PRP18YGR006W YCR043CP25361 127 aa3.84□□□□□ -1.79
PRP18YGR006W NPL6P32832 435 aa3.84□□□□□ -1.79
PRP18YGR006W SHP1P34223 423 aa3.84□□□□□ -1.79
PRP18YGR006W CMC1P36064 111 aa3.84□□□□□ -1.79
PRP18YGR006W SPC34P36131 295 aa3.84□□□□□ -1.79
PRP18YGR006W MUM2P38236 366 aa3.84□□□□□ -1.79
PRP18YGR006W ALT2P52892 507 aa3.84□□□□□ -1.79
PRP18YGR006W YGL082WP53155 381 aa3.84□□□□□ -1.79
PRP18YGR006W CUL3P53202 744 aa3.84□□□□□ -1.79
PRP18YGR006W LSC1P53598 329 aaKnown RBP3.84□□□□□ -1.79
PRP18YGR006W JJJ1P53863 590 aa3.84□□□□□ -1.79
PRP18YGR006W RHO4Q00246 291 aa3.84□□□□□ -1.79
PRP18YGR006W YPL014WQ02606 381 aa3.84□□□□□ -1.79
PRP18YGR006W SMA1Q02651 245 aa3.84□□□□□ -1.79
PRP18YGR006W DIG1Q03063 452 aaKnown RBP3.84□□□□□ -1.79
PRP18YGR006W YDR415CQ04033 374 aaPredicted RBP3.84□□□□□ -1.79
PRP18YGR006W FMP42Q04991 504 aa3.84□□□□□ -1.79
PRP18YGR006W ATG29Q12092 213 aa3.84□□□□□ -1.79
PRP18YGR006W NCE102Q12207 173 aaRIP-Chip data3.84□□□□□ -1.79not detected
PRP18YGR006W MET17P06106 444 aa3.83□□□□□ -1.8
PRP18YGR006W PEP4P07267 405 aaKnown RBP3.83□□□□□ -1.8
PRP18YGR006W HNM1P19807 563 aa3.83□□□□□ -1.8
PRP18YGR006W TYR1P20049 452 aa3.83□□□□□ -1.8
PRP18YGR006W ROX1P25042 368 aa3.83□□□□□ -1.8
PRP18YGR006W YNK1P36010 153 aaKnown RBP3.83□□□□□ -1.8
PRP18YGR006W YIR014WP40570 242 aa3.83□□□□□ -1.8
PRP18YGR006W AXL1P40851 1208 aa3.83□□□□□ -1.8
PRP18YGR006W STB2P46679 850 aa3.83□□□□□ -1.8
PRP18YGR006W ATG27P46989 271 aa3.83□□□□□ -1.8
PRP18YGR006W MSS11Q03825 758 aa3.83□□□□□ -1.8
PRP18YGR006W RPC11Q04307 110 aaPredicted RBP3.83□□□□□ -1.8
PRP18YGR006W COQ9Q05779 260 aa3.83□□□□□ -1.8
PRP18YGR006W MRD1Q06106 887 aaKnown RBP3.83□□□□□ -1.8
PRP18YGR006W YOR365CQ08844 703 aa3.83□□□□□ -1.8
PRP18YGR006W SFI1Q12369 946 aa3.83□□□□□ -1.8
PRP18YGR006W GRX6Q12438 231 aa3.83□□□□□ -1.8
PRP18YGR006W BRR1Q99177 341 aaPredicted RBP3.83□□□□□ -1.8
PRP18YGR006W HSH49Q99181 213 aaPredicted RBP3.83□□□□□ -1.8
PRP18YGR006W PRP2P20095 876 aaPredicted RBP3.82□□□□□ -1.8
PRP18YGR006W GPI10P30777 616 aa3.82□□□□□ -1.8
PRP18YGR006W VPS17P32913 551 aa3.82□□□□□ -1.8
PRP18YGR006W MFT1P33441 392 aaKnown RBP3.82□□□□□ -1.8
PRP18YGR006W OTU2P38747 307 aaKnown RBP3.82□□□□□ -1.8
PRP18YGR006W BZZ1P38822 633 aa3.82□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms