RNA–Protein interactions for RNA: YER094C

PUP3, Transcript of Beta 3 subunit of the 20S proteasome, yeastyeast

Gene PUP3, Length 618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP3YER094C HPF1Q05164 967 aa7.66□□□□□ -1.18
PUP3YER094C BCP1Q06338 283 aa7.66□□□□□ -1.18
PUP3YER094C GRS2Q06817 618 aa7.66□□□□□ -1.18
PUP3YER094C SGT1Q08446 395 aa7.66□□□□□ -1.18
PUP3YER094C GPB1Q08886 897 aa7.66□□□□□ -1.18
PUP3YER094C SAS5Q99314 248 aa7.66□□□□□ -1.18
PUP3YER094C ARD1P07347 238 aaPredicted RBP7.65□□□□□ -1.18
PUP3YER094C SWI5P08153 709 aa7.65□□□□□ -1.18
PUP3YER094C MET8P15807 274 aa7.65□□□□□ -1.18
PUP3YER094C DBR1P24309 405 aaKnown RBP7.65□□□□□ -1.18
PUP3YER094C ZIP1P31111 875 aa7.65□□□□□ -1.18
PUP3YER094C CCR4P31384 837 aaKnown RBP7.65□□□□□ -1.18
PUP3YER094C RML2P32611 393 aa7.65□□□□□ -1.18
PUP3YER094C CBF5P33322 483 aaKnown RBP RIP-Chip data7.65□□□□□ -1.18not detected
PUP3YER094C GIP1P38229 639 aa7.65□□□□□ -1.18
PUP3YER094C GIC1P38785 314 aa7.65□□□□□ -1.18
PUP3YER094C ALG5P40350 334 aa7.65□□□□□ -1.18
PUP3YER094C MET18P40469 1032 aa7.65□□□□□ -1.18
PUP3YER094C PFA3P42836 336 aa7.65□□□□□ -1.18
PUP3YER094C STB2P46679 850 aa7.65□□□□□ -1.18
PUP3YER094C MIG2P53035 382 aa7.65□□□□□ -1.18
PUP3YER094C YNR014WP53719 212 aa7.65□□□□□ -1.18
PUP3YER094C ARC35P53731 342 aaKnown RBP7.65□□□□□ -1.18
PUP3YER094C NIS1P53939 407 aa7.65□□□□□ -1.18
PUP3YER094C YPL113CQ02961 396 aa7.65□□□□□ -1.18
PUP3YER094C VPS68Q12016 184 aa7.65□□□□□ -1.18
PUP3YER094C SLF1Q12034 447 aaKnown RBP7.65□□□□□ -1.18
PUP3YER094C RRP42Q12277 265 aaPredicted RBP7.65□□□□□ -1.18
PUP3YER094C NAG1Q8TGN9 163 aa7.65□□□□□ -1.18
PUP3YER094C SPT3P06844 337 aa7.64□□□□□ -1.19
PUP3YER094C FUM1P08417 488 aaKnown RBP7.64□□□□□ -1.19
PUP3YER094C HOM2P13663 365 aaKnown RBP7.64□□□□□ -1.19
PUP3YER094C PDC5P16467 563 aaKnown RBP7.64□□□□□ -1.19
PUP3YER094C CLN2P20438 545 aa7.64□□□□□ -1.19
PUP3YER094C REC107P21651 314 aa7.64□□□□□ -1.19
PUP3YER094C YCK2P23292 546 aaKnown RBP7.64□□□□□ -1.19
PUP3YER094C YSR3P23501 404 aa7.64□□□□□ -1.19
PUP3YER094C DEF1P35732 738 aaKnown RBP7.64□□□□□ -1.19
PUP3YER094C TCD2P36101 447 aaKnown RBP7.64□□□□□ -1.19
PUP3YER094C INM1P38710 295 aa7.64□□□□□ -1.19
PUP3YER094C RRP3P38712 501 aaKnown RBP7.64□□□□□ -1.19
PUP3YER094C UBA4P38820 440 aa7.64□□□□□ -1.19
PUP3YER094C YHR127WP38833 243 aaKnown RBP7.64□□□□□ -1.19
PUP3YER094C YEL073CP39974 107 aa7.64□□□□□ -1.19
PUP3YER094C GIM4P40005 111 aaKnown RBP7.64□□□□□ -1.19
PUP3YER094C YJL070CP40361 888 aa7.64□□□□□ -1.19
PUP3YER094C YGR015CP53208 328 aa7.64□□□□□ -1.19
PUP3YER094C YLL032CQ07834 825 aaKnown RBP RIP-Chip data7.64□□□□□ -1.19not detected
PUP3YER094C SAM4Q08985 325 aaKnown RBP7.64□□□□□ -1.19
PUP3YER094C YPR011CQ12251 326 aa7.64□□□□□ -1.19
PUP3YER094C INH1P01097 85 aa7.63□□□□□ -1.19
PUP3YER094C STE3P06783 470 aa7.63□□□□□ -1.19
PUP3YER094C TUB1P09733 447 aaKnown RBP7.63□□□□□ -1.19
PUP3YER094C GBP2P25555 427 aaKnown RBP RIP-Chip data7.63□□□□□ -1.19not detected
PUP3YER094C SOL2P37262 315 aa7.63□□□□□ -1.19
PUP3YER094C BAT1P38891 393 aaKnown RBP7.63□□□□□ -1.19
PUP3YER094C SEC27P41811 889 aaKnown RBP7.63□□□□□ -1.19
PUP3YER094C YJR030CP47101 745 aa7.63□□□□□ -1.19
PUP3YER094C YJR149WP47177 404 aa7.63□□□□□ -1.19
PUP3YER094C GCV1P48015 400 aa7.63□□□□□ -1.19
PUP3YER094C MTR3P48240 250 aaPredicted RBP7.63□□□□□ -1.19
PUP3YER094C IMA1P53051 589 aa7.63□□□□□ -1.19
PUP3YER094C MDM34P53083 459 aa7.63□□□□□ -1.19
PUP3YER094C ART5P53244 586 aaKnown RBP7.63□□□□□ -1.19
PUP3YER094C CWC24P53769 259 aa7.63□□□□□ -1.19
PUP3YER094C PRP38Q00723 242 aaPredicted RBP7.63□□□□□ -1.19
PUP3YER094C RAD34Q06665 692 aa7.63□□□□□ -1.19
PUP3YER094C PLB3Q08108 686 aa7.63□□□□□ -1.19
PUP3YER094C UAF30Q08747 228 aa7.63□□□□□ -1.19
PUP3YER094C TFB4Q12004 338 aa7.63□□□□□ -1.19
PUP3YER094C IOC2Q12072 812 aa7.63□□□□□ -1.19
PUP3YER094C RGT2Q12300 763 aa7.63□□□□□ -1.19
PUP3YER094C HXK2P04807 486 aaKnown RBP7.62□□□□□ -1.19
PUP3YER094C SPS22P25380 463 aa7.62□□□□□ -1.19
PUP3YER094C RMA1P36001 430 aaKnown RBP7.62□□□□□ -1.19
PUP3YER094C CAF4P36130 643 aa7.62□□□□□ -1.19
PUP3YER094C BMT2P38278 337 aa7.62□□□□□ -1.19
PUP3YER094C ECM1P39715 212 aa7.62□□□□□ -1.19
PUP3YER094C HPM1P40481 377 aa7.62□□□□□ -1.19
PUP3YER094C MEP2P41948 499 aa7.62□□□□□ -1.19
PUP3YER094C YGL176CP46945 554 aa7.62□□□□□ -1.19
PUP3YER094C TY4A-JP47023 414 aa7.62□□□□□ -1.19
PUP3YER094C GTO1P48239 356 aa7.62□□□□□ -1.19
PUP3YER094C NAS6P50086 228 aa7.62□□□□□ -1.19
PUP3YER094C MPS2P53159 387 aa7.62□□□□□ -1.19
PUP3YER094C YNL035CP53962 389 aaKnown RBP7.62□□□□□ -1.19
PUP3YER094C AAT1Q01802 451 aa7.62□□□□□ -1.19
PUP3YER094C ECM9Q02202 377 aa7.62□□□□□ -1.19
PUP3YER094C ACL4Q03771 387 aa7.62□□□□□ -1.19
PUP3YER094C YMR111CQ04461 462 aaPredicted RBP7.62□□□□□ -1.19
PUP3YER094C CDA1Q06702 301 aa7.62□□□□□ -1.19
PUP3YER094C SNX3Q08826 162 aaKnown RBP7.62□□□□□ -1.19
PUP3YER094C ATG29Q12092 213 aa7.62□□□□□ -1.19
PUP3YER094C NSL1Q12143 216 aa7.62□□□□□ -1.19
PUP3YER094C YPL245WQ12179 454 aaKnown RBP7.62□□□□□ -1.19
PUP3YER094C YCL012CQ8J0M4 134 aa7.62□□□□□ -1.19
PUP3YER094C BRR1Q99177 341 aaPredicted RBP7.62□□□□□ -1.19
PUP3YER094C STT4P37297 1900 aa7.62□□□□□ -1.19
PUP3YER094C DST1P07273 309 aa7.61□□□□□ -1.19
PUP3YER094C CCA1P21269 546 aa7.61□□□□□ -1.19
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms