RNA–Protein interactions for RNA: YEL051W

VMA8, Transcript of Subunit D of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA8, Length 771 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA8	YEL051W	ACP1	P32463	125 aa		3.16	□□□□□ -1.9
VMA8	YEL051W	PAH1	P32567	862 aa		3.16	□□□□□ -1.9
VMA8	YEL051W	SRB5	P32585	307 aa		3.16	□□□□□ -1.9
VMA8	YEL051W	TIF3	P34167	436 aa	Known RBP	3.16	□□□□□ -1.9
VMA8	YEL051W	UBP13	P38187	747 aa		3.16	□□□□□ -1.9
VMA8	YEL051W	CTM1	P38818	585 aa		3.16	□□□□□ -1.9
VMA8	YEL051W	RTT107	P38850	1070 aa		3.16	□□□□□ -1.9
VMA8	YEL051W	YHB1	P39676	399 aa	Known RBP	3.16	□□□□□ -1.9
VMA8	YEL051W	PCL7	P40186	285 aa		3.16	□□□□□ -1.9
VMA8	YEL051W	MET18	P40469	1032 aa		3.16	□□□□□ -1.9
VMA8	YEL051W	SAD1	P43589	448 aa		3.16	□□□□□ -1.9
VMA8	YEL051W	SIP4	P46954	829 aa		3.16	□□□□□ -1.9
VMA8	YEL051W	INP2	Q03824	705 aa		3.16	□□□□□ -1.9
VMA8	YEL051W	RRP17	Q04031	235 aa	Predicted RBP	3.16	□□□□□ -1.9
VMA8	YEL051W	RAD30	Q04049	632 aa		3.16	□□□□□ -1.9
VMA8	YEL051W	ERB1	Q04660	807 aa	Known RBP	3.16	□□□□□ -1.9
VMA8	YEL051W	ARP9	Q05123	467 aa		3.16	□□□□□ -1.9
VMA8	YEL051W	YLR281C	Q05863	155 aa		3.16	□□□□□ -1.9
VMA8	YEL051W	GPN2	Q08726	347 aa	Predicted RBP	3.16	□□□□□ -1.9
VMA8	YEL051W	RIO1	Q12196	484 aa	Known RBP	3.16	□□□□□ -1.9
VMA8	YEL051W	IKI3	Q06706	1349 aa	Known RBP	3.16	□□□□□ -1.9
VMA8	YEL051W	YBR085C-A	O43137	85 aa		3.15	□□□□□ -1.91
VMA8	YEL051W	TEF1	P02994	458 aa	Known RBP	3.15	□□□□□ -1.91
VMA8	YEL051W	SEN2	P16658	377 aa		3.15	□□□□□ -1.91
VMA8	YEL051W	FUR1	P18562	216 aa	Known RBP	3.15	□□□□□ -1.91
VMA8	YEL051W	KRE6	P32486	720 aa		3.15	□□□□□ -1.91
VMA8	YEL051W	SOF1	P33750	489 aa	Known RBP	3.15	□□□□□ -1.91
VMA8	YEL051W	BMH2	P34730	273 aa	Known RBP	3.15	□□□□□ -1.91
VMA8	YEL051W	LHS1	P36016	881 aa		3.15	□□□□□ -1.91
VMA8	YEL051W	NTR2	P36118	322 aa	Predicted RBP	3.15	□□□□□ -1.91
VMA8	YEL051W	NOP4	P37838	685 aa	Known RBP	3.15	□□□□□ -1.91
VMA8	YEL051W	ADE17	P38009	592 aa	Known RBP	3.15	□□□□□ -1.91
VMA8	YEL051W	YBL028C	P38202	106 aa		3.15	□□□□□ -1.91
VMA8	YEL051W	RTS1	P38903	757 aa		3.15	□□□□□ -1.91
VMA8	YEL051W	STN1	P38960	494 aa		3.15	□□□□□ -1.91
VMA8	YEL051W	AIM10	P39965	576 aa	Known RBP	3.15	□□□□□ -1.91
VMA8	YEL051W	YND1	P40009	630 aa		3.15	□□□□□ -1.91
VMA8	YEL051W	VRG4	P40107	337 aa		3.15	□□□□□ -1.91
VMA8	YEL051W	SLZ1	P40167	298 aa		3.15	□□□□□ -1.91
VMA8	YEL051W	GPD2	P41911	440 aa	Known RBP	3.15	□□□□□ -1.91
VMA8	YEL051W	SWP82	P43554	623 aa		3.15	□□□□□ -1.91
VMA8	YEL051W	EPL1	P43572	832 aa		3.15	□□□□□ -1.91
VMA8	YEL051W	ROK1	P45818	564 aa	Predicted RBP	3.15	□□□□□ -1.91
VMA8	YEL051W	YJL055W	P47044	245 aa		3.15	□□□□□ -1.91
VMA8	YEL051W	YGL260W	P53056	76 aa		3.15	□□□□□ -1.91
VMA8	YEL051W	YNR061C	P53747	219 aa		3.15	□□□□□ -1.91
VMA8	YEL051W	ESBP6	P53918	673 aa		3.15	□□□□□ -1.91
VMA8	YEL051W	RRN5	Q02983	363 aa		3.15	□□□□□ -1.91
VMA8	YEL051W	MUB1	Q03162	620 aa		3.15	□□□□□ -1.91
VMA8	YEL051W	YDR131C	Q03899	556 aa		3.15	□□□□□ -1.91
VMA8	YEL051W	VPS20	Q04272	221 aa		3.15	□□□□□ -1.91
VMA8	YEL051W	NNT1	Q05874	261 aa		3.15	□□□□□ -1.91
VMA8	YEL051W	TSR1	Q07381	788 aa	Known RBP	3.15	□□□□□ -1.91
VMA8	YEL051W	BRX1	Q08235	291 aa	Known RBP	3.15	□□□□□ -1.91
VMA8	YEL051W	RKM1	Q08961	583 aa	Predicted RBP	3.15	□□□□□ -1.91
VMA8	YEL051W	HUA2	Q12134	243 aa		3.15	□□□□□ -1.91
VMA8	YEL051W	SMC6	Q12749	1114 aa		3.15	□□□□□ -1.91
VMA8	YEL051W	YBL111C	Q3E7Y5	667 aa		3.15	□□□□□ -1.91
VMA8	YEL051W	YIL002W-A	Q3E7Z5	69 aa		3.15	□□□□□ -1.91
VMA8	YEL051W	RPS3	P05750	240 aa	Known RBP	3.14	□□□□□ -1.91
VMA8	YEL051W	CBP1	P07252	654 aa		3.14	□□□□□ -1.91
VMA8	YEL051W	CHO1	P08456	276 aa		3.14	□□□□□ -1.91
VMA8	YEL051W	PUT4	P15380	627 aa		3.14	□□□□□ -1.91
VMA8	YEL051W	ZUO1	P32527	433 aa	Known RBP	3.14	□□□□□ -1.91
VMA8	YEL051W	MIC60	P36112	540 aa		3.14	□□□□□ -1.91
VMA8	YEL051W	ECM4	P36156	370 aa		3.14	□□□□□ -1.91
VMA8	YEL051W	MRPL40	P36534	297 aa		3.14	□□□□□ -1.91
VMA8	YEL051W	YBL029W	P38201	376 aa		3.14	□□□□□ -1.91
VMA8	YEL051W	SRP72	P38688	640 aa	Known RBP	3.14	□□□□□ -1.91
VMA8	YEL051W	LEU5	P38702	357 aa		3.14	□□□□□ -1.91
VMA8	YEL051W	YHR131C	P38835	850 aa		3.14	□□□□□ -1.91
VMA8	YEL051W	SHC1	P39000	512 aa		3.14	□□□□□ -1.91
VMA8	YEL051W	NOP16	P40007	231 aa	Known RBP	3.14	□□□□□ -1.91
VMA8	YEL051W	MRX1	P40050	688 aa		3.14	□□□□□ -1.91
VMA8	YEL051W	BUR6	P40096	142 aa		3.14	□□□□□ -1.91
VMA8	YEL051W	JEM1	P40358	645 aa		3.14	□□□□□ -1.91
VMA8	YEL051W	ESL1	P40456	1118 aa		3.14	□□□□□ -1.91
VMA8	YEL051W	SEC24	P40482	926 aa	Known RBP	3.14	□□□□□ -1.91
VMA8	YEL051W	ARC1	P46672	376 aa	Known RBP	3.14	□□□□□ -1.91
VMA8	YEL051W	SHE4	P51534	789 aa		3.14	□□□□□ -1.91
VMA8	YEL051W	DUO1	P53168	247 aa	Known RBP	3.14	□□□□□ -1.91
VMA8	YEL051W	INN1	P53901	409 aa		3.14	□□□□□ -1.91
VMA8	YEL051W	ASI1	P54074	624 aa		3.14	□□□□□ -1.91
VMA8	YEL051W	YSA1	Q01976	231 aa		3.14	□□□□□ -1.91
VMA8	YEL051W	YMR254C	Q04838	102 aa		3.14	□□□□□ -1.91
VMA8	YEL051W	FMP42	Q04991	504 aa		3.14	□□□□□ -1.91
VMA8	YEL051W	SKG3	Q06315	1026 aa		3.14	□□□□□ -1.91
VMA8	YEL051W	DNL4	Q08387	944 aa	Predicted RBP	3.14	□□□□□ -1.91
VMA8	YEL051W	SMF3	Q12078	473 aa	Predicted RBP	3.14	□□□□□ -1.91
VMA8	YEL051W	YBR126W-A	Q8TGU7	68 aa		3.14	□□□□□ -1.91
VMA8	YEL051W	TCB3	Q03640	1545 aa	Known RBP	3.14	□□□□□ -1.91
VMA8	YEL051W	YCK1	P23291	538 aa		3.13	□□□□□ -1.91
VMA8	YEL051W	STE50	P25344	346 aa		3.13	□□□□□ -1.91
VMA8	YEL051W	PAP1	P29468	568 aa	Known RBP	3.13	□□□□□ -1.91
VMA8	YEL051W	HSP104	P31539	908 aa	Known RBP	3.13	□□□□□ -1.91
VMA8	YEL051W	TFB1	P32776	642 aa		3.13	□□□□□ -1.91
VMA8	YEL051W	MRP4	P32902	394 aa		3.13	□□□□□ -1.91
VMA8	YEL051W	MIA40	P36046	403 aa		3.13	□□□□□ -1.91
VMA8	YEL051W	MAL33	P38157	468 aa		3.13	□□□□□ -1.91
VMA8	YEL051W	YSW1	P38280	609 aa		3.13	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms