RNA–Protein interactions for RNA: YDR378C

LSM6, Transcript of Lsm (Like Sm) protein, yeast

Gene LSM6, Length 261 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM6	YDR378C	ROK1	P45818	564 aa	Predicted RBP	4.97	□□□□□ -1.61
LSM6	YDR378C	SNG1	P46950	547 aa		4.97	□□□□□ -1.61
LSM6	YDR378C	MPS1	P54199	764 aa		4.97	□□□□□ -1.61
LSM6	YDR378C	MSC1	Q03104	513 aa		4.97	□□□□□ -1.61
LSM6	YDR378C	YMR254C	Q04838	102 aa		4.97	□□□□□ -1.61
LSM6	YDR378C	YDL057W	Q07379	328 aa		4.97	□□□□□ -1.61
LSM6	YDR378C	RIM20	Q12033	661 aa		4.97	□□□□□ -1.61
LSM6	YDR378C	MCM4	P30665	933 aa	Known RBP	4.96	□□□□□ -1.62
LSM6	YDR378C	TMT1	P32643	299 aa		4.96	□□□□□ -1.62
LSM6	YDR378C	WBP1	P33767	430 aa	Known RBP	4.96	□□□□□ -1.62
LSM6	YDR378C	CST26	P38226	397 aa		4.96	□□□□□ -1.62
LSM6	YDR378C	VID24	P38263	362 aa		4.96	□□□□□ -1.62
LSM6	YDR378C	ERG7	P38604	731 aa		4.96	□□□□□ -1.62
LSM6	YDR378C	PET130	P47065	347 aa		4.96	□□□□□ -1.62
LSM6	YDR378C	BET4	Q00618	327 aa		4.96	□□□□□ -1.62
LSM6	YDR378C	TOF2	Q02208	771 aa		4.96	□□□□□ -1.62
LSM6	YDR378C	SHR3	Q02774	210 aa		4.96	□□□□□ -1.62
LSM6	YDR378C	SPC19	Q03954	165 aa		4.96	□□□□□ -1.62
LSM6	YDR378C	YDR415C	Q04033	374 aa	Predicted RBP	4.96	□□□□□ -1.62
LSM6	YDR378C	SYF1	Q04048	859 aa	Predicted RBP	4.96	□□□□□ -1.62
LSM6	YDR378C	TAF11	Q04226	346 aa		4.96	□□□□□ -1.62
LSM6	YDR378C	RSF1	Q05043	376 aa		4.96	□□□□□ -1.62
LSM6	YDR378C	YMR034C	Q05131	434 aa	Predicted RBP	4.96	□□□□□ -1.62
LSM6	YDR378C	YFL068W	P0CX99	160 aa		4.95	□□□□□ -1.62
LSM6	YDR378C	YLL066W-A	P0CY00	160 aa		4.95	□□□□□ -1.62
LSM6	YDR378C	YLL067W-A	P0CY01	160 aa		4.95	□□□□□ -1.62
LSM6	YDR378C	RED1	P14291	827 aa		4.95	□□□□□ -1.62
LSM6	YDR378C	MGR1	P25573	417 aa		4.95	□□□□□ -1.62
LSM6	YDR378C	PAP1	P29468	568 aa	Known RBP	4.95	□□□□□ -1.62
LSM6	YDR378C	MRE11	P32829	692 aa		4.95	□□□□□ -1.62
LSM6	YDR378C	PHD1	P36093	366 aa		4.95	□□□□□ -1.62
LSM6	YDR378C	YIL152W	P40455	235 aa		4.95	□□□□□ -1.62
LSM6	YDR378C	RPC11	Q04307	110 aa	Predicted RBP	4.95	□□□□□ -1.62
LSM6	YDR378C	YLR281C	Q05863	155 aa		4.95	□□□□□ -1.62
LSM6	YDR378C	ARP6	Q12509	438 aa		4.95	□□□□□ -1.62
LSM6	YDR378C	PEP5	P12868	1029 aa		4.94	□□□□□ -1.62
LSM6	YDR378C	ROX1	P25042	368 aa		4.94	□□□□□ -1.62
LSM6	YDR378C	PRD1	P25375	712 aa		4.94	□□□□□ -1.62
LSM6	YDR378C	MUM2	P38236	366 aa		4.94	□□□□□ -1.62
LSM6	YDR378C	ARC40	P38328	384 aa	Known RBP	4.94	□□□□□ -1.62
LSM6	YDR378C	MET18	P40469	1032 aa		4.94	□□□□□ -1.62
LSM6	YDR378C	ALK1	P43633	760 aa	Known RBP	4.94	□□□□□ -1.62
LSM6	YDR378C	TWF1	P53250	332 aa		4.94	□□□□□ -1.62
LSM6	YDR378C	YPL068C	Q02749	293 aa		4.94	□□□□□ -1.62
LSM6	YDR378C	YLR352W	Q06479	807 aa		4.94	□□□□□ -1.62
LSM6	YDR378C	YAP7	Q08182	245 aa		4.94	□□□□□ -1.62
LSM6	YDR378C	SRL1	Q08673	210 aa		4.94	□□□□□ -1.62
LSM6	YDR378C	ATG29	Q12092	213 aa		4.94	□□□□□ -1.62
LSM6	YDR378C	FUR1	P18562	216 aa	Known RBP	4.93	□□□□□ -1.62
LSM6	YDR378C	GPI10	P30777	616 aa		4.93	□□□□□ -1.62
LSM6	YDR378C	MFT1	P33441	392 aa	Known RBP	4.93	□□□□□ -1.62
LSM6	YDR378C	CMC1	P36064	111 aa		4.93	□□□□□ -1.62
LSM6	YDR378C	MIC60	P36112	540 aa		4.93	□□□□□ -1.62
LSM6	YDR378C	RRP3	P38712	501 aa	Known RBP	4.93	□□□□□ -1.62
LSM6	YDR378C	MET30	P39014	640 aa		4.93	□□□□□ -1.62
LSM6	YDR378C	YIL169C	P40442	995 aa		4.93	□□□□□ -1.62
LSM6	YDR378C	AXL1	P40851	1208 aa		4.93	□□□□□ -1.62
LSM6	YDR378C	YGL082W	P53155	381 aa		4.93	□□□□□ -1.62
LSM6	YDR378C	YPL014W	Q02606	381 aa		4.93	□□□□□ -1.62
LSM6	YDR378C	SMA1	Q02651	245 aa		4.93	□□□□□ -1.62
LSM6	YDR378C	DIG1	Q03063	452 aa	Known RBP	4.93	□□□□□ -1.62
LSM6	YDR378C	COQ9	Q05779	260 aa		4.93	□□□□□ -1.62
LSM6	YDR378C	SCM3	Q12334	223 aa		4.93	□□□□□ -1.62
LSM6	YDR378C	SFI1	Q12369	946 aa		4.93	□□□□□ -1.62
LSM6	YDR378C	SEC39	Q12745	709 aa		4.93	□□□□□ -1.62
LSM6	YDR378C	RAD24	P32641	659 aa		4.92	□□□□□ -1.62
LSM6	YDR378C	SHP1	P34223	423 aa		4.92	□□□□□ -1.62
LSM6	YDR378C	RKM3	P38222	552 aa		4.92	□□□□□ -1.62
LSM6	YDR378C	YHR210C	P38893	341 aa		4.92	□□□□□ -1.62
LSM6	YDR378C	JJJ1	P53863	590 aa		4.92	□□□□□ -1.62
LSM6	YDR378C	GLO2	Q05584	274 aa		4.92	□□□□□ -1.62
LSM6	YDR378C	MRD1	Q06106	887 aa	Known RBP	4.92	□□□□□ -1.62
LSM6	YDR378C	APL5	Q08951	932 aa	Known RBP	4.92	□□□□□ -1.62
LSM6	YDR378C	NCE102	Q12207	173 aa	RIP-Chip data	4.92	□□□□□ -1.62	not detected
LSM6	YDR378C	YCR043C	P25361	127 aa		4.91	□□□□□ -1.62
LSM6	YDR378C	RPN2	P32565	945 aa	Known RBP	4.91	□□□□□ -1.62
LSM6	YDR378C	TRS65	P32893	560 aa		4.91	□□□□□ -1.62
LSM6	YDR378C	YNK1	P36010	153 aa	Known RBP	4.91	□□□□□ -1.62
LSM6	YDR378C	OTU2	P38747	307 aa	Known RBP	4.91	□□□□□ -1.62
LSM6	YDR378C	SMF1	P38925	575 aa		4.91	□□□□□ -1.62
LSM6	YDR378C	TES1	P41903	349 aa	Known RBP	4.91	□□□□□ -1.62
LSM6	YDR378C	FET5	P43561	622 aa		4.91	□□□□□ -1.62
LSM6	YDR378C	STB2	P46679	850 aa		4.91	□□□□□ -1.62
LSM6	YDR378C	FMP42	Q04991	504 aa		4.91	□□□□□ -1.62
LSM6	YDR378C	THP1	Q08231	455 aa		4.91	□□□□□ -1.62
LSM6	YDR378C	BSC1	Q12140	328 aa		4.91	□□□□□ -1.62
LSM6	YDR378C	RRG1	Q12167	365 aa	Predicted RBP	4.91	□□□□□ -1.62
LSM6	YDR378C	GRX6	Q12438	231 aa		4.91	□□□□□ -1.62
LSM6	YDR378C	RTN2	Q12443	393 aa		4.91	□□□□□ -1.62
LSM6	YDR378C	PEP4	P07267	405 aa	Known RBP	4.9	□□□□□ -1.63
LSM6	YDR378C	HNM1	P19807	563 aa		4.9	□□□□□ -1.63
LSM6	YDR378C	NPL6	P32832	435 aa		4.9	□□□□□ -1.63
LSM6	YDR378C	PMT1	P33775	817 aa		4.9	□□□□□ -1.63
LSM6	YDR378C	AZF1	P41696	914 aa		4.9	□□□□□ -1.63
LSM6	YDR378C	ATG27	P46989	271 aa		4.9	□□□□□ -1.63
LSM6	YDR378C	ALT2	P52892	507 aa		4.9	□□□□□ -1.63
LSM6	YDR378C	CAF130	P53280	1122 aa	Predicted RBP	4.9	□□□□□ -1.63
LSM6	YDR378C	RHO4	Q00246	291 aa		4.9	□□□□□ -1.63
LSM6	YDR378C	MSS11	Q03825	758 aa		4.9	□□□□□ -1.63
LSM6	YDR378C	PDS5	Q04264	1277 aa		4.9	□□□□□ -1.63

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