RNA–Protein interactions for RNA: YDR080W

VPS41, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VPS41, Length 2,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS41YDR080W TSR1Q07381 788 aaKnown RBP2.61□□□□□ -1.99
VPS41YDR080W YPT1P01123 206 aaKnown RBP2.61□□□□□ -1.99
VPS41YDR080W RAD3P06839 778 aa2.61□□□□□ -1.99
VPS41YDR080W YJU2P28320 278 aaPredicted RBP2.61□□□□□ -1.99
VPS41YDR080W BRF1P29056 596 aa2.61□□□□□ -1.99
VPS41YDR080W CYM1P32898 989 aa2.61□□□□□ -1.99
VPS41YDR080W YEN1P40028 759 aa2.61□□□□□ -1.99
VPS41YDR080W YJL070CP40361 888 aa2.61□□□□□ -1.99
VPS41YDR080W NBP1P52919 319 aaPredicted RBP2.61□□□□□ -1.99
VPS41YDR080W COG6P53959 839 aa2.61□□□□□ -1.99
VPS41YDR080W TIM8P57744 87 aa2.61□□□□□ -1.99
VPS41YDR080W HRD3Q05787 833 aa2.61□□□□□ -1.99
VPS41YDR080W YLR012CQ07927 99 aa2.61□□□□□ -1.99
VPS41YDR080W YLR111WQ12528 110 aa2.61□□□□□ -1.99
VPS41YDR080W RNR2P09938 399 aaKnown RBP2.61□□□□□ -1.99
VPS41YDR080W RPL1AP0CX43 217 aaKnown RBP2.61□□□□□ -1.99
VPS41YDR080W RPL1BP0CX44 217 aaKnown RBP2.61□□□□□ -1.99
VPS41YDR080W POL30P15873 258 aaKnown RBP2.61□□□□□ -1.99
VPS41YDR080W NUP1P20676 1076 aa2.61□□□□□ -1.99
VPS41YDR080W CAP1P28495 268 aaKnown RBP2.61□□□□□ -1.99
VPS41YDR080W HEM12P32347 362 aaPredicted RBP2.61□□□□□ -1.99
VPS41YDR080W FUI1P38196 639 aa2.61□□□□□ -1.99
VPS41YDR080W YBR071WP38243 211 aa2.61□□□□□ -1.99
VPS41YDR080W SRP68P38687 599 aaKnown RBP2.61□□□□□ -1.99
VPS41YDR080W IWR1Q07532 353 aaPredicted RBP2.61□□□□□ -1.99
VPS41YDR080W YOR387CQ08910 206 aa2.61□□□□□ -1.99
VPS41YDR080W AFT2Q08957 416 aa2.61□□□□□ -1.99
VPS41YDR080W SEC39Q12745 709 aa2.61□□□□□ -1.99
VPS41YDR080W FMP27Q06179 2628 aa2.6□□□□□ -1.99
VPS41YDR080W RPL22AP05749 121 aaKnown RBP2.6□□□□□ -1.99
VPS41YDR080W CDC1P40986 491 aa2.6□□□□□ -1.99
VPS41YDR080W COS5P47187 383 aa2.6□□□□□ -1.99
VPS41YDR080W YNR071CP53757 342 aa2.6□□□□□ -1.99
VPS41YDR080W NDD1Q08887 554 aa2.6□□□□□ -1.99
VPS41YDR080W BEM2P39960 2167 aaKnown RBP2.6□□□□□ -1.99
VPS41YDR080W SUC2P00724 532 aa2.6□□□□□ -1.99
VPS41YDR080W HIS4P00815 799 aaKnown RBP2.6□□□□□ -1.99
VPS41YDR080W CDC42P19073 191 aa2.6□□□□□ -1.99
VPS41YDR080W AEP2P22136 580 aa2.6□□□□□ -1.99
VPS41YDR080W YPS6P40583 537 aa2.6□□□□□ -1.99
VPS41YDR080W UBX6P47049 396 aa2.6□□□□□ -1.99
VPS41YDR080W MND1P53102 219 aa2.6□□□□□ -1.99
VPS41YDR080W TGL2P54857 326 aa2.6□□□□□ -1.99
VPS41YDR080W YML096WQ04489 525 aa2.6□□□□□ -1.99
VPS41YDR080W ICT1Q12385 394 aa2.6□□□□□ -1.99
VPS41YDR080W SEN1Q00416 2231 aaKnown RBP2.6□□□□□ -1.99
VPS41YDR080W LDB16P25587 256 aa2.59□□□□□ -1.99
VPS41YDR080W BEM1P29366 551 aa2.59□□□□□ -1.99
VPS41YDR080W EFB1P32471 206 aaKnown RBP2.59□□□□□ -1.99
VPS41YDR080W PMT1P33775 817 aa2.59□□□□□ -1.99
VPS41YDR080W RFT1P38206 574 aaPredicted RBP2.59□□□□□ -1.99
VPS41YDR080W SAE2P46946 345 aa2.59□□□□□ -1.99
VPS41YDR080W PRM1P53835 661 aa2.59□□□□□ -1.99
VPS41YDR080W AQR1P53943 586 aa2.59□□□□□ -1.99
VPS41YDR080W PPM1Q04081 328 aa2.59□□□□□ -1.99
VPS41YDR080W MCP2Q06567 569 aa2.59□□□□□ -1.99
VPS41YDR080W ABP140Q08641 628 aaKnown RBP2.59□□□□□ -1.99
VPS41YDR080W CWC2Q12046 339 aaPredicted RBP2.59□□□□□ -1.99
VPS41YDR080W SKM1Q12469 655 aa2.59□□□□□ -1.99
VPS41YDR080W TMA17Q12513 150 aa2.59□□□□□ -1.99
VPS41YDR080W AI5_BETAQ9ZZX0 354 aa2.59□□□□□ -1.99
VPS41YDR080W HSP82P02829 709 aaKnown RBP2.59□□□□□ -2
VPS41YDR080W RPS3P05750 240 aaKnown RBP2.59□□□□□ -2
VPS41YDR080W GSY2P27472 705 aa2.59□□□□□ -2
VPS41YDR080W CCT6P39079 546 aa2.59□□□□□ -2
VPS41YDR080W ELO1P39540 310 aa2.59□□□□□ -2
VPS41YDR080W LTP1P40347 161 aa2.59□□□□□ -2
VPS41YDR080W COS12P53053 380 aa2.59□□□□□ -2
VPS41YDR080W CEF1Q03654 590 aaPredicted RBP2.59□□□□□ -2
VPS41YDR080W PER33Q12144 273 aa2.59□□□□□ -2
VPS41YDR080W NAG1Q8TGN9 163 aa2.59□□□□□ -2
VPS41YDR080W INH1P01097 85 aa2.58□□□□□ -2
VPS41YDR080W MIS1P09440 975 aaKnown RBP2.58□□□□□ -2
VPS41YDR080W DGR2P32330 852 aa2.58□□□□□ -2
VPS41YDR080W DHR2P36009 735 aaPredicted RBP2.58□□□□□ -2
VPS41YDR080W YJL193WP39542 402 aa2.58□□□□□ -2
VPS41YDR080W XBP1P40489 647 aa2.58□□□□□ -2
VPS41YDR080W RRN11Q04712 507 aa2.58□□□□□ -2
VPS41YDR080W EIS1Q05050 843 aaKnown RBP2.58□□□□□ -2
VPS41YDR080W GRX8Q05926 109 aa2.58□□□□□ -2
VPS41YDR080W DDC1Q08949 612 aa2.58□□□□□ -2
VPS41YDR080W RMP1Q12530 201 aa2.58□□□□□ -2
VPS41YDR080W URA3P03962 267 aa2.58□□□□□ -2
VPS41YDR080W SEC63P14906 663 aa2.58□□□□□ -2
VPS41YDR080W RRT12P25381 491 aa2.58□□□□□ -2
VPS41YDR080W CWH43P25618 953 aa2.58□□□□□ -2
VPS41YDR080W UBP7P40453 1071 aa2.58□□□□□ -2
VPS41YDR080W RNR4P49723 345 aaKnown RBP2.58□□□□□ -2
VPS41YDR080W PRP24P49960 444 aaKnown RBP2.58□□□□□ -2
VPS41YDR080W YTP1P53584 459 aa2.58□□□□□ -2
VPS41YDR080W YML119WQ03208 357 aa2.58□□□□□ -2
VPS41YDR080W RKM5Q12367 367 aa2.58□□□□□ -2
VPS41YDR080W DAL81P21657 970 aa2.58□□□□□ -2
VPS41YDR080W AMD2P22580 549 aa2.58□□□□□ -2
VPS41YDR080W LRE1P25579 583 aaKnown RBP2.58□□□□□ -2
VPS41YDR080W PLC1P32383 869 aa2.58□□□□□ -2
VPS41YDR080W CDC5P32562 705 aa2.58□□□□□ -2
VPS41YDR080W TAF14P35189 244 aa2.58□□□□□ -2
VPS41YDR080W KAP104P38217 918 aaKnown RBP2.58□□□□□ -2
VPS41YDR080W SPT8P38915 602 aa2.58□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms