RNA–Protein interactions for RNA: YDR004W

RAD57, Transcript of Protein that stimulates strand exchange, yeast

Gene RAD57, Length 1,383 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RAD57	YDR004W	SPC98	P53540	846 aa		4.99	□□□□□ -1.61
RAD57	YDR004W	ATG4	P53867	494 aa		4.99	□□□□□ -1.61
RAD57	YDR004W	RPS15	Q01855	142 aa	Known RBP	4.99	□□□□□ -1.61
RAD57	YDR004W	YER175W-A	Q8TGU4	54 aa		4.99	□□□□□ -1.61
RAD57	YDR004W	NUM1	Q00402	2748 aa		4.98	□□□□□ -1.61
RAD57	YDR004W	ARD1	P07347	238 aa	Predicted RBP	4.98	□□□□□ -1.61
RAD57	YDR004W	APL3	P38065	1025 aa		4.98	□□□□□ -1.61
RAD57	YDR004W	MNN2	P38069	597 aa		4.98	□□□□□ -1.61
RAD57	YDR004W	YHL017W	P38745	532 aa		4.98	□□□□□ -1.61
RAD57	YDR004W	VPS45	P38932	577 aa		4.98	□□□□□ -1.61
RAD57	YDR004W	SAE2	P46946	345 aa		4.98	□□□□□ -1.61
RAD57	YDR004W	YGR151C	P53287	111 aa		4.98	□□□□□ -1.61
RAD57	YDR004W	YNL092W	P53934	400 aa		4.98	□□□□□ -1.61
RAD57	YDR004W	MFM1	Q02783	413 aa		4.98	□□□□□ -1.61
RAD57	YDR004W	INA17	Q02888	182 aa		4.98	□□□□□ -1.61
RAD57	YDR004W	EMI2	Q04409	500 aa	Known RBP	4.98	□□□□□ -1.61
RAD57	YDR004W	YSH1	Q06224	779 aa	Predicted RBP	4.98	□□□□□ -1.61
RAD57	YDR004W	CRN1	Q06440	651 aa		4.98	□□□□□ -1.61
RAD57	YDR004W	MRI1	Q06489	411 aa	Known RBP	4.98	□□□□□ -1.61
RAD57	YDR004W	DAP1	Q12091	152 aa		4.98	□□□□□ -1.61
RAD57	YDR004W	USV1	Q12132	391 aa		4.98	□□□□□ -1.61
RAD57	YDR004W	SRP54	P20424	541 aa	Known RBP	4.97	□□□□□ -1.61
RAD57	YDR004W	AMD2	P22580	549 aa		4.97	□□□□□ -1.61
RAD57	YDR004W	PUP2	P32379	260 aa		4.97	□□□□□ -1.61
RAD57	YDR004W	YPT10	P38146	199 aa		4.97	□□□□□ -1.61
RAD57	YDR004W	OSH3	P38713	996 aa	Known RBP	4.97	□□□□□ -1.61
RAD57	YDR004W	PCL5	P38794	229 aa		4.97	□□□□□ -1.61
RAD57	YDR004W	EFM4	P40516	257 aa		4.97	□□□□□ -1.61
RAD57	YDR004W	VMA13	P41807	478 aa	Known RBP	4.97	□□□□□ -1.61
RAD57	YDR004W	THI6	P41835	540 aa		4.97	□□□□□ -1.61
RAD57	YDR004W	YJL055W	P47044	245 aa		4.97	□□□□□ -1.61
RAD57	YDR004W	MSE1	P48525	536 aa		4.97	□□□□□ -1.61
RAD57	YDR004W	FMS1	P50264	508 aa		4.97	□□□□□ -1.61
RAD57	YDR004W	DIP5	P53388	608 aa		4.97	□□□□□ -1.61
RAD57	YDR004W	OGG1	P53397	376 aa	Predicted RBP	4.97	□□□□□ -1.61
RAD57	YDR004W	RPA49	Q01080	415 aa	Predicted RBP	4.97	□□□□□ -1.61
RAD57	YDR004W	YMR206W	Q03695	313 aa		4.97	□□□□□ -1.61
RAD57	YDR004W	YDR239C	Q03780	787 aa		4.97	□□□□□ -1.61
RAD57	YDR004W	ROY1	Q04847	553 aa		4.97	□□□□□ -1.61
RAD57	YDR004W	VPS38	Q05919	439 aa		4.97	□□□□□ -1.61
RAD57	YDR004W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
RAD57	YDR004W	ACF2	Q12168	779 aa		4.97	□□□□□ -1.61
RAD57	YDR004W	FRE6	Q12473	712 aa		4.97	□□□□□ -1.61
RAD57	YDR004W	COX1	P00401	534 aa		4.96	□□□□□ -1.62
RAD57	YDR004W	GAL80	P04387	435 aa		4.96	□□□□□ -1.62
RAD57	YDR004W	YPK1	P12688	680 aa	Known RBP	4.96	□□□□□ -1.62
RAD57	YDR004W	EST1	P17214	699 aa	Predicted RBP	4.96	□□□□□ -1.62
RAD57	YDR004W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.96	□□□□□ -1.62	not detected
RAD57	YDR004W	YIH1	P25637	258 aa		4.96	□□□□□ -1.62
RAD57	YDR004W	CNE1	P27825	502 aa		4.96	□□□□□ -1.62
RAD57	YDR004W	PDB1	P32473	366 aa	Known RBP	4.96	□□□□□ -1.62
RAD57	YDR004W	PMT1	P33775	817 aa		4.96	□□□□□ -1.62
RAD57	YDR004W	CCL1	P37366	393 aa		4.96	□□□□□ -1.62
RAD57	YDR004W	ARG2	P40360	574 aa		4.96	□□□□□ -1.62
RAD57	YDR004W	CSM2	P40465	213 aa		4.96	□□□□□ -1.62
RAD57	YDR004W	SAD1	P43589	448 aa		4.96	□□□□□ -1.62
RAD57	YDR004W	PET130	P47065	347 aa		4.96	□□□□□ -1.62
RAD57	YDR004W	NPA3	P47122	385 aa		4.96	□□□□□ -1.62
RAD57	YDR004W	YIP4	P53093	235 aa		4.96	□□□□□ -1.62
RAD57	YDR004W	NMA2	P53204	395 aa		4.96	□□□□□ -1.62
RAD57	YDR004W	SUN4	P53616	420 aa		4.96	□□□□□ -1.62
RAD57	YDR004W	BUD17	P53727	317 aa		4.96	□□□□□ -1.62
RAD57	YDR004W	TIM44	Q01852	431 aa		4.96	□□□□□ -1.62
RAD57	YDR004W	ATG29	Q12092	213 aa		4.96	□□□□□ -1.62
RAD57	YDR004W	GPM3	Q12326	303 aa		4.96	□□□□□ -1.62
RAD57	YDR004W	AFI1	Q99222	893 aa		4.96	□□□□□ -1.62
RAD57	YDR004W	AI5_ALPHA	Q9ZZX1	630 aa		4.96	□□□□□ -1.62
RAD57	YDR004W	Q0010	Q9ZZX9	128 aa		4.96	□□□□□ -1.62
RAD57	YDR004W	SNA3	P14359	133 aa		4.95	□□□□□ -1.62
RAD57	YDR004W	SYN8	P31377	255 aa		4.95	□□□□□ -1.62
RAD57	YDR004W	ERC1	P38767	581 aa		4.95	□□□□□ -1.62
RAD57	YDR004W	LNP1	P38878	278 aa		4.95	□□□□□ -1.62
RAD57	YDR004W	MSY1	P48527	492 aa		4.95	□□□□□ -1.62
RAD57	YDR004W	VID30	P53076	958 aa		4.95	□□□□□ -1.62
RAD57	YDR004W	STR3	P53101	465 aa	Known RBP	4.95	□□□□□ -1.62
RAD57	YDR004W	LIF1	P53150	421 aa		4.95	□□□□□ -1.62
RAD57	YDR004W	YAT1	P80235	687 aa		4.95	□□□□□ -1.62
RAD57	YDR004W	HOT1	Q03213	719 aa		4.95	□□□□□ -1.62
RAD57	YDR004W	BUD22	Q04347	519 aa	Known RBP	4.95	□□□□□ -1.62
RAD57	YDR004W	RSF1	Q05043	376 aa		4.95	□□□□□ -1.62
RAD57	YDR004W	RQC1	Q05468	723 aa	Known RBP	4.95	□□□□□ -1.62
RAD57	YDR004W	HBT1	Q07653	1046 aa	Known RBP	4.95	□□□□□ -1.62
RAD57	YDR004W	RKI1	Q12189	258 aa		4.95	□□□□□ -1.62
RAD57	YDR004W	FMP27	Q06179	2628 aa		4.95	□□□□□ -1.62
RAD57	YDR004W	STE4	P18851	423 aa		4.94	□□□□□ -1.62
RAD57	YDR004W	CPR2	P23285	205 aa		4.94	□□□□□ -1.62
RAD57	YDR004W	PAP1	P29468	568 aa	Known RBP	4.94	□□□□□ -1.62
RAD57	YDR004W	TIF3	P34167	436 aa	Known RBP	4.94	□□□□□ -1.62
RAD57	YDR004W	NTR2	P36118	322 aa	Predicted RBP	4.94	□□□□□ -1.62
RAD57	YDR004W	GLG1	P36143	616 aa		4.94	□□□□□ -1.62
RAD57	YDR004W	AGP2	P38090	596 aa		4.94	□□□□□ -1.62
RAD57	YDR004W	NDC80	P40460	691 aa		4.94	□□□□□ -1.62
RAD57	YDR004W	MDE1	P47095	244 aa		4.94	□□□□□ -1.62
RAD57	YDR004W	YPL107W	Q02873	248 aa		4.94	□□□□□ -1.62
RAD57	YDR004W	MYO5	Q04439	1219 aa	Known RBP	4.94	□□□□□ -1.62
RAD57	YDR004W	UFO1	Q04511	668 aa		4.94	□□□□□ -1.62
RAD57	YDR004W	LUC7	Q07508	261 aa	Predicted RBP	4.94	□□□□□ -1.62
RAD57	YDR004W	YDL242W	Q07746	117 aa		4.94	□□□□□ -1.62
RAD57	YDR004W	SPE3	Q12074	293 aa	Known RBP	4.94	□□□□□ -1.62
RAD57	YDR004W	AVL9	Q12500	764 aa		4.94	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 49 ms