RNA–Protein interactions for RNA: YCR045C

RRT12, Transcript of Probable subtilisin-family protease, yeast

Gene RRT12, Length 1,476 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRT12	YCR045C	CSN12	P47130	423 aa		11.44	□□□□□ -0.58
RRT12	YCR045C	VPS62	P53285	467 aa		11.44	□□□□□ -0.58
RRT12	YCR045C	PEX11	Q12462	236 aa		11.44	□□□□□ -0.58
RRT12	YCR045C	SRF1	Q12516	437 aa		11.44	□□□□□ -0.58
RRT12	YCR045C	THP2	O13539	261 aa	Known RBP	11.44	□□□□□ -0.58
RRT12	YCR045C	CBP2	P03874	630 aa	Predicted RBP	11.44	□□□□□ -0.58
RRT12	YCR045C	RPS4A	P0CX35	261 aa	Known RBP	11.44	□□□□□ -0.58
RRT12	YCR045C	RPS4B	P0CX36	261 aa	Known RBP	11.44	□□□□□ -0.58
RRT12	YCR045C	MAS1	P10507	462 aa		11.44	□□□□□ -0.58
RRT12	YCR045C	RAP1	P11938	827 aa		11.44	□□□□□ -0.58
RRT12	YCR045C	SDH2	P21801	266 aa		11.44	□□□□□ -0.58
RRT12	YCR045C	SFP1	P32432	683 aa		11.44	□□□□□ -0.58
RRT12	YCR045C	COX13	P32799	129 aa		11.44	□□□□□ -0.58
RRT12	YCR045C	RBG1	P39729	369 aa		11.44	□□□□□ -0.58
RRT12	YCR045C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	11.44	□□□□□ -0.58	not detected
RRT12	YCR045C	PEX12	Q04370	399 aa		11.44	□□□□□ -0.58
RRT12	YCR045C	YHC1	Q05900	231 aa	Known RBP	11.44	□□□□□ -0.58
RRT12	YCR045C	GPI11	Q06636	219 aa		11.44	□□□□□ -0.58
RRT12	YCR045C	DTD1	Q07648	150 aa	Known RBP	11.44	□□□□□ -0.58
RRT12	YCR045C	KSS1	P14681	368 aa		11.43	□□□□□ -0.58
RRT12	YCR045C	FAR1	P21268	830 aa		11.43	□□□□□ -0.58
RRT12	YCR045C	MRPL32	P25348	183 aa		11.43	□□□□□ -0.58
RRT12	YCR045C	PUP3	P25451	205 aa	Known RBP	11.43	□□□□□ -0.58
RRT12	YCR045C	APE2	P32454	952 aa	Known RBP	11.43	□□□□□ -0.58
RRT12	YCR045C	RPT5	P33297	434 aa	Known RBP	11.43	□□□□□ -0.58
RRT12	YCR045C	KTR4	P38131	464 aa		11.43	□□□□□ -0.58
RRT12	YCR045C	MTW1	P39731	289 aa		11.43	□□□□□ -0.58
RRT12	YCR045C	AIM20	P40451	204 aa		11.43	□□□□□ -0.58
RRT12	YCR045C	AYR1	P40471	297 aa		11.43	□□□□□ -0.58
RRT12	YCR045C	GAT1	P43574	510 aa		11.43	□□□□□ -0.58
RRT12	YCR045C	UPF3	P48412	387 aa	Known RBP	11.43	□□□□□ -0.58
RRT12	YCR045C	UGO1	Q03327	502 aa		11.43	□□□□□ -0.58
RRT12	YCR045C	GSF2	Q04697	403 aa	Known RBP	11.43	□□□□□ -0.58
RRT12	YCR045C	PFK27	Q12471	397 aa	Predicted RBP	11.43	□□□□□ -0.58
RRT12	YCR045C	SST2	P11972	698 aa	Known RBP	11.42	□□□□□ -0.58
RRT12	YCR045C	RPS5	P26783	225 aa	Known RBP	11.42	□□□□□ -0.58
RRT12	YCR045C	UBC8	P28263	218 aa		11.42	□□□□□ -0.58
RRT12	YCR045C	BRF1	P29056	596 aa		11.42	□□□□□ -0.58
RRT12	YCR045C	SYN8	P31377	255 aa		11.42	□□□□□ -0.58
RRT12	YCR045C	SCD5	P34758	872 aa		11.42	□□□□□ -0.58
RRT12	YCR045C	IRR1	P40541	1150 aa		11.42	□□□□□ -0.58
RRT12	YCR045C	MSS2	P40990	351 aa		11.42	□□□□□ -0.58
RRT12	YCR045C	RMD8	P43620	662 aa		11.42	□□□□□ -0.58
RRT12	YCR045C	STB2	P46679	850 aa		11.42	□□□□□ -0.58
RRT12	YCR045C	ARE2	P53629	642 aa	Known RBP	11.42	□□□□□ -0.58
RRT12	YCR045C	PEX13	P80667	386 aa		11.42	□□□□□ -0.58
RRT12	YCR045C	BSP1	Q06604	576 aa		11.42	□□□□□ -0.58
RRT12	YCR045C	YOL159C-A	Q3E769	90 aa		11.42	□□□□□ -0.58
RRT12	YCR045C	MRP13	P12686	339 aa		11.41	□□□□□ -0.58
RRT12	YCR045C	MRPL40	P36534	297 aa		11.41	□□□□□ -0.58
RRT12	YCR045C	ERV46	P39727	415 aa		11.41	□□□□□ -0.58
RRT12	YCR045C	RGI1	P40043	161 aa	Predicted RBP	11.41	□□□□□ -0.58
RRT12	YCR045C	BTT1	P40314	149 aa	Predicted RBP	11.41	□□□□□ -0.58
RRT12	YCR045C	PAN6	P40459	309 aa		11.41	□□□□□ -0.58
RRT12	YCR045C	GTO1	P48239	356 aa		11.41	□□□□□ -0.58
RRT12	YCR045C	YNL143C	P53908	130 aa		11.41	□□□□□ -0.58
RRT12	YCR045C	EFR3	Q03653	782 aa	Known RBP	11.41	□□□□□ -0.58
RRT12	YCR045C	CLU1	Q03690	1277 aa	Known RBP	11.41	□□□□□ -0.58
RRT12	YCR045C	ECM11	Q04110	302 aa		11.41	□□□□□ -0.58
RRT12	YCR045C	IRC10	Q08118	586 aa		11.41	□□□□□ -0.58
RRT12	YCR045C	RSB1	Q08417	382 aa		11.41	□□□□□ -0.58
RRT12	YCR045C	NDD1	Q08887	554 aa		11.41	□□□□□ -0.58
RRT12	YCR045C	RSA1	Q08932	381 aa		11.41	□□□□□ -0.58
RRT12	YCR045C	YPQ1	Q12010	308 aa		11.41	□□□□□ -0.58
RRT12	YCR045C	PHO5	P00635	467 aa		11.4	□□□□□ -0.58
RRT12	YCR045C	DST1	P07273	309 aa		11.4	□□□□□ -0.58
RRT12	YCR045C	CLB2	P24869	491 aa		11.4	□□□□□ -0.58
RRT12	YCR045C	YKL100C	P34248	587 aa		11.4	□□□□□ -0.58
RRT12	YCR045C	MAE1	P36013	669 aa	Known RBP	11.4	□□□□□ -0.58
RRT12	YCR045C	SIP4	P46954	829 aa		11.4	□□□□□ -0.58
RRT12	YCR045C	PNG1	Q02890	363 aa		11.4	□□□□□ -0.58
RRT12	YCR045C	SRL4	Q03085	281 aa		11.4	□□□□□ -0.58
RRT12	YCR045C	RTN1	Q04947	295 aa	Known RBP	11.4	□□□□□ -0.58
RRT12	YCR045C	NDL1	Q06568	189 aa		11.4	□□□□□ -0.58
RRT12	YCR045C	RAD34	Q06665	692 aa		11.4	□□□□□ -0.58
RRT12	YCR045C	GYP1	Q08484	637 aa		11.4	□□□□□ -0.58
RRT12	YCR045C	YLR046C	Q12253	270 aa		11.4	□□□□□ -0.58
RRT12	YCR045C	SSE2	P32590	693 aa	Known RBP	11.39	□□□□□ -0.59
RRT12	YCR045C	NPL6	P32832	435 aa		11.39	□□□□□ -0.59
RRT12	YCR045C	STB6	P36085	766 aa		11.39	□□□□□ -0.59
RRT12	YCR045C	SPC34	P36131	295 aa		11.39	□□□□□ -0.59
RRT12	YCR045C	THO1	P40040	218 aa	Known RBP	11.39	□□□□□ -0.59
RRT12	YCR045C	YGL176C	P46945	554 aa		11.39	□□□□□ -0.59
RRT12	YCR045C	RBL2	P48606	106 aa	Known RBP	11.39	□□□□□ -0.59
RRT12	YCR045C	SHE4	P51534	789 aa		11.39	□□□□□ -0.59
RRT12	YCR045C	YNR068C	P53754	272 aa		11.39	□□□□□ -0.59
RRT12	YCR045C	SDH1	Q00711	640 aa		11.39	□□□□□ -0.59
RRT12	YCR045C	SSL1	Q04673	461 aa	Predicted RBP	11.39	□□□□□ -0.59
RRT12	YCR045C	SSQ1	Q05931	657 aa	Predicted RBP	11.39	□□□□□ -0.59
RRT12	YCR045C	MCM21	Q06675	368 aa		11.39	□□□□□ -0.59
RRT12	YCR045C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	11.39	□□□□□ -0.59	not detected
RRT12	YCR045C	YOL131W	Q08270	108 aa		11.39	□□□□□ -0.59
RRT12	YCR045C	MLH3	Q12083	715 aa		11.39	□□□□□ -0.59
RRT12	YCR045C	YLL054C	Q12244	843 aa		11.39	□□□□□ -0.59
RRT12	YCR045C	FRT1	Q99332	602 aa		11.39	□□□□□ -0.59
RRT12	YCR045C	RPS9A	O13516	197 aa	Known RBP	11.38	□□□□□ -0.59
RRT12	YCR045C	CBS2	P14905	389 aa		11.38	□□□□□ -0.59
RRT12	YCR045C	PEX3	P28795	441 aa		11.38	□□□□□ -0.59
RRT12	YCR045C	NTG1	P31378	399 aa		11.38	□□□□□ -0.59
RRT12	YCR045C	ARP2	P32381	391 aa	Known RBP	11.38	□□□□□ -0.59

Retrieved 100 of 5,963 RNA–protein pairs in 21 ms