RNA–Protein interactions for RNA: YAL005C

SSA1, Transcript of ATPase involved in protein folding and NLS-directed nuclear transport, yeast

Gene SSA1, Length 1,929 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSA1	YAL005C	UTP9	P38882	575 aa	Known RBP	13.13	□□□□□ -0.31
SSA1	YAL005C	BIR1	P47134	954 aa		13.13	□□□□□ -0.31
SSA1	YAL005C	FMN1	Q03778	218 aa		13.13	□□□□□ -0.31
SSA1	YAL005C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	13.13	□□□□□ -0.31	not detected
SSA1	YAL005C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	13.13	□□□□□ -0.31	not detected
SSA1	YAL005C	GTR2	P53290	341 aa		13.13	□□□□□ -0.31
SSA1	YAL005C	SRP1	Q02821	542 aa	Known RBP	13.13	□□□□□ -0.31
SSA1	YAL005C	YML131W	Q03102	365 aa		13.13	□□□□□ -0.31
SSA1	YAL005C	PLB3	Q08108	686 aa		13.13	□□□□□ -0.31
SSA1	YAL005C	SPT3	P06844	337 aa		13.12	□□□□□ -0.31
SSA1	YAL005C	GLO2	Q05584	274 aa		13.12	□□□□□ -0.31
SSA1	YAL005C	GRS2	Q06817	618 aa		13.12	□□□□□ -0.31
SSA1	YAL005C	CLN2	P20438	545 aa		13.11	□□□□□ -0.31
SSA1	YAL005C	MVD1	P32377	396 aa	Known RBP	13.11	□□□□□ -0.31
SSA1	YAL005C	SPR1	P32603	445 aa		13.11	□□□□□ -0.31
SSA1	YAL005C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	13.11	□□□□□ -0.31	not detected
SSA1	YAL005C	SIP2	P34164	415 aa	Known RBP	13.11	□□□□□ -0.31
SSA1	YAL005C	PCF11	P39081	626 aa	Predicted RBP	13.11	□□□□□ -0.31
SSA1	YAL005C	PFA3	P42836	336 aa		13.11	□□□□□ -0.31
SSA1	YAL005C	YMR102C	Q03177	834 aa		13.11	□□□□□ -0.31
SSA1	YAL005C	BCH1	Q05029	724 aa		13.11	□□□□□ -0.31
SSA1	YAL005C	FAR10	Q06001	478 aa		13.11	□□□□□ -0.31
SSA1	YAL005C	RAD34	Q06665	692 aa		13.11	□□□□□ -0.31
SSA1	YAL005C	RTT10	Q08924	1013 aa		13.11	□□□□□ -0.31
SSA1	YAL005C	SRO7	Q12038	1033 aa		13.11	□□□□□ -0.31
SSA1	YAL005C	YLR049C	Q12110	428 aa		13.11	□□□□□ -0.31
SSA1	YAL005C	ARG1	P22768	420 aa		13.11	□□□□□ -0.31
SSA1	YAL005C	EMP65	P40085	556 aa		13.11	□□□□□ -0.31
SSA1	YAL005C	MCD1	Q12158	566 aa		13.11	□□□□□ -0.31
SSA1	YAL005C	BUB2	P26448	306 aa	Predicted RBP	13.1	□□□□□ -0.31
SSA1	YAL005C	DEP1	P31385	405 aa		13.1	□□□□□ -0.31
SSA1	YAL005C	YKL100C	P34248	587 aa		13.1	□□□□□ -0.31
SSA1	YAL005C	SPF1	P39986	1215 aa	Known RBP	13.1	□□□□□ -0.31
SSA1	YAL005C	SCS2	P40075	244 aa	Known RBP	13.1	□□□□□ -0.31
SSA1	YAL005C	NOP19	P53317	196 aa	Predicted RBP	13.1	□□□□□ -0.31
SSA1	YAL005C	REX2	P54964	269 aa	Known RBP	13.1	□□□□□ -0.31
SSA1	YAL005C	ESA1	Q08649	445 aa		13.1	□□□□□ -0.31
SSA1	YAL005C	COX3	P00420	269 aa		13.09	□□□□□ -0.31
SSA1	YAL005C	GIM4	P40005	111 aa	Known RBP	13.09	□□□□□ -0.31
SSA1	YAL005C	MPS2	P53159	387 aa		13.09	□□□□□ -0.31
SSA1	YAL005C	YGR015C	P53208	328 aa		13.09	□□□□□ -0.31
SSA1	YAL005C	CUS2	P53830	285 aa	Predicted RBP	13.09	□□□□□ -0.31
SSA1	YAL005C	UBP2	Q01476	1272 aa		13.09	□□□□□ -0.31
SSA1	YAL005C	ROT1	Q03691	256 aa		13.09	□□□□□ -0.31
SSA1	YAL005C	GGA1	Q06336	557 aa		13.09	□□□□□ -0.31
SSA1	YAL005C	TFB4	Q12004	338 aa		13.09	□□□□□ -0.31
SSA1	YAL005C	TRP3	P00937	484 aa		13.09	□□□□□ -0.31
SSA1	YAL005C	RSR1	P13856	272 aa		13.09	□□□□□ -0.31
SSA1	YAL005C	CRM1	P30822	1084 aa	Known RBP	13.09	□□□□□ -0.31
SSA1	YAL005C	PTC1	P35182	281 aa		13.09	□□□□□ -0.31
SSA1	YAL005C	YHR218W	P38899	603 aa		13.09	□□□□□ -0.31
SSA1	YAL005C	YIL108W	P40483	696 aa	Known RBP	13.09	□□□□□ -0.31
SSA1	YAL005C	CAR1	P00812	333 aa	Known RBP	13.08	□□□□□ -0.32
SSA1	YAL005C	CMP2	P14747	604 aa		13.08	□□□□□ -0.32
SSA1	YAL005C	GFD2	P25370	566 aa	Known RBP	13.08	□□□□□ -0.32
SSA1	YAL005C	RAD14	P28519	371 aa		13.08	□□□□□ -0.32
SSA1	YAL005C	RPS1A	P33442	255 aa	Known RBP	13.08	□□□□□ -0.32
SSA1	YAL005C	DED81	P38707	554 aa	Known RBP	13.08	□□□□□ -0.32
SSA1	YAL005C	YHR127W	P38833	243 aa	Known RBP	13.08	□□□□□ -0.32
SSA1	YAL005C	YER034W	P40022	185 aa	Known RBP	13.08	□□□□□ -0.32
SSA1	YAL005C	MET18	P40469	1032 aa		13.08	□□□□□ -0.32
SSA1	YAL005C	FKH2	P41813	862 aa		13.08	□□□□□ -0.32
SSA1	YAL005C	GCV1	P48015	400 aa		13.08	□□□□□ -0.32
SSA1	YAL005C	YPT32	P51996	222 aa	Known RBP	13.08	□□□□□ -0.32
SSA1	YAL005C	YNL010W	P53981	241 aa	Known RBP	13.08	□□□□□ -0.32
SSA1	YAL005C	YDR444W	Q04093	687 aa		13.08	□□□□□ -0.32
SSA1	YAL005C	YFT2	Q06676	274 aa		13.08	□□□□□ -0.32
SSA1	YAL005C	YEH2	Q07950	538 aa		13.08	□□□□□ -0.32
SSA1	YAL005C	STE3	P06783	470 aa		13.07	□□□□□ -0.32
SSA1	YAL005C	GCD10	P41814	478 aa		13.07	□□□□□ -0.32
SSA1	YAL005C	TMA22	P47089	198 aa	Predicted RBP	13.07	□□□□□ -0.32
SSA1	YAL005C	ELA1	P53861	379 aa	Predicted RBP	13.07	□□□□□ -0.32
SSA1	YAL005C	YET2	Q04210	160 aa		13.07	□□□□□ -0.32
SSA1	YAL005C	YDR056C	Q12025	205 aa		13.07	□□□□□ -0.32
SSA1	YAL005C	COS2	P0CX12	379 aa		13.07	□□□□□ -0.32
SSA1	YAL005C	COS3	P0CX13	379 aa		13.07	□□□□□ -0.32
SSA1	YAL005C	COS4	P43542	379 aa		13.07	□□□□□ -0.32
SSA1	YAL005C	YFR020W	P43600	232 aa		13.07	□□□□□ -0.32
SSA1	YAL005C	YNL035C	P53962	389 aa	Known RBP	13.07	□□□□□ -0.32
SSA1	YAL005C	LGE1	Q02796	332 aa	Known RBP	13.07	□□□□□ -0.32
SSA1	YAL005C	PSR1	Q07800	427 aa		13.07	□□□□□ -0.32
SSA1	YAL005C	PFA4	Q12006	378 aa		13.07	□□□□□ -0.32
SSA1	YAL005C	CLB1	P24868	471 aa		13.06	□□□□□ -0.32
SSA1	YAL005C	UBP14	P38237	781 aa	Known RBP	13.06	□□□□□ -0.32
SSA1	YAL005C	INM1	P38710	295 aa		13.06	□□□□□ -0.32
SSA1	YAL005C	YGL176C	P46945	554 aa		13.06	□□□□□ -0.32
SSA1	YAL005C	YJR149W	P47177	404 aa		13.06	□□□□□ -0.32
SSA1	YAL005C	USE1	P53146	245 aa		13.06	□□□□□ -0.32
SSA1	YAL005C	YPL109C	Q02981	657 aa		13.06	□□□□□ -0.32
SSA1	YAL005C	SCL1	P21243	252 aa	Known RBP	13.05	□□□□□ -0.32
SSA1	YAL005C	MGM101	P32787	269 aa	Known RBP	13.05	□□□□□ -0.32
SSA1	YAL005C	PPG1	P32838	368 aa		13.05	□□□□□ -0.32
SSA1	YAL005C	YPT35	P38815	214 aa	Known RBP	13.05	□□□□□ -0.32
SSA1	YAL005C	ARB1	P40024	610 aa	Known RBP	13.05	□□□□□ -0.32
SSA1	YAL005C	YJR030C	P47101	745 aa		13.05	□□□□□ -0.32
SSA1	YAL005C	TIM11	P81449	96 aa	Predicted RBP	13.05	□□□□□ -0.32
SSA1	YAL005C	YMR111C	Q04461	462 aa	Predicted RBP	13.05	□□□□□ -0.32
SSA1	YAL005C	DIA2	Q08496	732 aa	Predicted RBP	13.05	□□□□□ -0.32
SSA1	YAL005C	RRP42	Q12277	265 aa	Predicted RBP	13.05	□□□□□ -0.32
SSA1	YAL005C	HRP1	Q99383	534 aa	Known RBP	13.05	□□□□□ -0.32

Retrieved 100 of 5,963 RNA–protein pairs in 106.6 ms