RNA–Protein interactions for RNA: NME1

NME1, Transcript of RNA component of RNase MRP, yeastyeast

Gene NME1, Length 340 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NME1NME1 COQ9Q05779 260 aa8.36□□□□□ -1.07
NME1NME1 ECI1Q05871 280 aa8.36□□□□□ -1.07
NME1NME1 YDL057WQ07379 328 aa8.36□□□□□ -1.07
NME1NME1 DBF4P32325 704 aa8.35□□□□□ -1.07
NME1NME1 SNG1P46950 547 aa8.35□□□□□ -1.07
NME1NME1 STP1Q00947 519 aa8.35□□□□□ -1.07
NME1NME1 YMR160WQ03823 816 aa8.35□□□□□ -1.07
NME1NME1 PDS5Q04264 1277 aa8.35□□□□□ -1.07
NME1NME1 YDL007C-AQ2V2Q0 85 aa8.35□□□□□ -1.07
NME1NME1 CBP1P07252 654 aa8.34□□□□□ -1.07
NME1NME1 YKL023WP36103 277 aaKnown RBP8.34□□□□□ -1.07
NME1NME1 LEU5P38702 357 aa8.34□□□□□ -1.07
NME1NME1 SOL4P53315 255 aa8.34□□□□□ -1.07
NME1NME1 YVH1Q02256 364 aaKnown RBP8.34□□□□□ -1.07
NME1NME1 GSH2Q08220 491 aa8.34□□□□□ -1.07
NME1NME1 YER190C-BP0CX94 160 aa8.33□□□□□ -1.08
NME1NME1 YEL077W-AP0CX95 160 aa8.33□□□□□ -1.08
NME1NME1 YGR296C-BP0CX96 160 aa8.33□□□□□ -1.08
NME1NME1 YPL283W-BP0CX97 160 aa8.33□□□□□ -1.08
NME1NME1 YPR204C-AP0CX98 160 aa8.33□□□□□ -1.08
NME1NME1 ALK1P43633 760 aaKnown RBP8.33□□□□□ -1.08
NME1NME1 NET1P47035 1189 aa8.33□□□□□ -1.08
NME1NME1 PKP2P53170 491 aa8.33□□□□□ -1.08
NME1NME1 CAF130P53280 1122 aaPredicted RBP8.33□□□□□ -1.08
NME1NME1 SMM1P53720 384 aaKnown RBP8.33□□□□□ -1.08
NME1NME1 IZH1Q03419 316 aa8.33□□□□□ -1.08
NME1NME1 YPR089WO13585 888 aa8.32□□□□□ -1.08
NME1NME1 PXA2P34230 853 aa8.32□□□□□ -1.08
NME1NME1 LAG1P38703 411 aa8.32□□□□□ -1.08
NME1NME1 YNL181WP53878 407 aa8.32□□□□□ -1.08
NME1NME1 RPL15BP54780 204 aaPredicted RBP8.32□□□□□ -1.08
NME1NME1 MRPL1Q04599 285 aa8.32□□□□□ -1.08
NME1NME1 REC107P21651 314 aa8.31□□□□□ -1.08
NME1NME1 AIM17P23180 465 aaKnown RBP8.31□□□□□ -1.08
NME1NME1 VMA8P32610 256 aaKnown RBP8.31□□□□□ -1.08
NME1NME1 SSU1P41930 458 aa8.31□□□□□ -1.08
NME1NME1 VTA1Q06263 330 aa8.31□□□□□ -1.08
NME1NME1 HER1Q12276 1246 aa8.31□□□□□ -1.08
NME1NME1 YRF1-4O13559 1382 aa8.31□□□□□ -1.08
NME1NME1 ELO2P25358 347 aa8.3□□□□□ -1.08
NME1NME1 SNC1P31109 117 aa8.3□□□□□ -1.08
NME1NME1 ECM32P32644 1121 aaKnown RBP8.3□□□□□ -1.08
NME1NME1 SHP1P34223 423 aa8.3□□□□□ -1.08
NME1NME1 SHR3Q02774 210 aa8.3□□□□□ -1.08
NME1NME1 SSK1Q07084 712 aa8.3□□□□□ -1.08
NME1NME1 YHR210CP38893 341 aa8.29□□□□□ -1.08
NME1NME1 IAH1P41734 238 aa8.29□□□□□ -1.08
NME1NME1 GAT1P43574 510 aa8.29□□□□□ -1.08
NME1NME1 AIM22P47051 409 aa8.29□□□□□ -1.08
NME1NME1 NUP100Q02629 959 aa8.29□□□□□ -1.08
NME1NME1 EKI1Q03764 534 aa8.29□□□□□ -1.08
NME1NME1 THP1Q08231 455 aa8.29□□□□□ -1.08
NME1NME1 PEP4P07267 405 aaKnown RBP8.28□□□□□ -1.08
NME1NME1 RPL31BP0C2H9 113 aaKnown RBP8.28□□□□□ -1.08
NME1NME1 PRP2P20095 876 aaPredicted RBP8.28□□□□□ -1.08
NME1NME1 YPK3P38070 525 aa8.28□□□□□ -1.08
NME1NME1 SRP72P38688 640 aaKnown RBP8.28□□□□□ -1.08
NME1NME1 YIR016WP40572 265 aa8.28□□□□□ -1.08
NME1NME1 MNP1P53163 194 aaPredicted RBP8.28□□□□□ -1.08
NME1NME1 RMT2Q03305 412 aa8.28□□□□□ -1.08
NME1NME1 NCE102Q12207 173 aaRIP-Chip data8.28□□□□□ -1.08not detected
NME1NME1 PEP5P12868 1029 aa8.27□□□□□ -1.09
NME1NME1 RPL3P14126 387 aaKnown RBP8.27□□□□□ -1.09
NME1NME1 CLC1P17891 233 aa8.27□□□□□ -1.09
NME1NME1 MDM10P18409 493 aa8.27□□□□□ -1.09
NME1NME1 GID7P25569 745 aa8.27□□□□□ -1.09
NME1NME1 PDR3P33200 976 aa8.27□□□□□ -1.09
NME1NME1 DLD2P46681 530 aaKnown RBP8.27□□□□□ -1.09
NME1NME1 MDV1P47025 714 aa8.27□□□□□ -1.09
NME1NME1 YDR131CQ03899 556 aa8.27□□□□□ -1.09
NME1NME1 ISA2Q12425 185 aa8.27□□□□□ -1.09
NME1NME1 SMC6Q12749 1114 aa8.27□□□□□ -1.09
NME1NME1 MCM4P30665 933 aaKnown RBP8.26□□□□□ -1.09
NME1NME1 MGM1P32266 881 aa8.26□□□□□ -1.09
NME1NME1 SPC97P38863 823 aa8.26□□□□□ -1.09
NME1NME1 YJL068CP40363 299 aa8.26□□□□□ -1.09
NME1NME1 PCI8P40512 444 aa8.26□□□□□ -1.09
NME1NME1 RPA49Q01080 415 aaPredicted RBP8.26□□□□□ -1.09
NME1NME1 RAV1P47104 1357 aa8.25□□□□□ -1.09
NME1NME1 COR1P07256 457 aa8.25□□□□□ -1.09
NME1NME1 RPL42AP0CX27 106 aaKnown RBP8.25□□□□□ -1.09
NME1NME1 RPL42BP0CX28 106 aaKnown RBP8.25□□□□□ -1.09
NME1NME1 ADK2P26364 225 aa8.25□□□□□ -1.09
NME1NME1 BUD14P27637 709 aa8.25□□□□□ -1.09
NME1NME1 PCL6P40038 420 aa8.25□□□□□ -1.09
NME1NME1 RTS2P40962 232 aa8.25□□□□□ -1.09
NME1NME1 RSC1P53236 928 aa8.25□□□□□ -1.09
NME1NME1 YPL014WQ02606 381 aa8.25□□□□□ -1.09
NME1NME1 YCR051WP25631 222 aa8.24□□□□□ -1.09
NME1NME1 HCS1P34243 683 aa8.24□□□□□ -1.09
NME1NME1 STB6P36085 766 aa8.24□□□□□ -1.09
NME1NME1 MBB1P39534 108 aa8.24□□□□□ -1.09
NME1NME1 ATG27P46989 271 aa8.24□□□□□ -1.09
NME1NME1 HEF3P53978 1044 aaKnown RBP8.24□□□□□ -1.09
NME1NME1 RBS1Q05672 457 aaKnown RBP8.24□□□□□ -1.09
NME1NME1 YOR365CQ08844 703 aa8.24□□□□□ -1.09
NME1NME1 BRR1Q99177 341 aaPredicted RBP8.24□□□□□ -1.09
NME1NME1 HOM3P10869 527 aa8.23□□□□□ -1.09
NME1NME1 PMS1P14242 873 aa8.23□□□□□ -1.09
NME1NME1 YCP4P25349 247 aaKnown RBP8.23□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 21.6 ms