RNA–Protein interactions for RNA: ENST00000563668.5

SPSB3-202, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 1,509 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-202ENST00000563668 STAG2Q8N3U4 1231 aa19.86■□□□□ 0.77
SPSB3-202ENST00000563668 FAM133AQ8N9E0 248 aa19.86■□□□□ 0.77
SPSB3-202ENST00000563668 KCNB2Q92953 911 aa19.86■□□□□ 0.77
SPSB3-202ENST00000563668 GPHNQ9NQX3 736 aaPredicted RBP19.86■□□□□ 0.77
SPSB3-202ENST00000563668 FOXD4L1Q9NU39 408 aa19.86■□□□□ 0.77
SPSB3-202ENST00000563668 H0YGN5 161 aa19.85■□□□□ 0.77
SPSB3-202ENST00000563668 NFIBO00712 420 aa19.85■□□□□ 0.77
SPSB3-202ENST00000563668 SLC27A2O14975 620 aa19.85■□□□□ 0.77
SPSB3-202ENST00000563668 COL6A1P12109 1028 aa19.85■□□□□ 0.77
SPSB3-202ENST00000563668 CAPN2P17655 700 aa19.85■□□□□ 0.77
SPSB3-202ENST00000563668 MCM4P33991 863 aa19.85■□□□□ 0.77
SPSB3-202ENST00000563668 DEKP35659 375 aaKnown RBP19.85■□□□□ 0.77
SPSB3-202ENST00000563668 NECTIN1Q15223 517 aa19.85■□□□□ 0.77
SPSB3-202ENST00000563668 MAMDC4Q6UXC1 1216 aa19.85■□□□□ 0.77
SPSB3-202ENST00000563668 MB21D2Q8IYB1 491 aaPredicted RBP19.85■□□□□ 0.77
SPSB3-202ENST00000563668 NCOA7Q8NI08 942 aa19.85■□□□□ 0.77
SPSB3-202ENST00000563668 LENG1Q96BZ8 264 aaPredicted RBP19.85■□□□□ 0.77
SPSB3-202ENST00000563668 PCDH10Q9P2E7 1040 aa19.85■□□□□ 0.77
SPSB3-202ENST00000563668 SNX14Q9Y5W7 946 aa19.85■□□□□ 0.77
SPSB3-202ENST00000563668 ALPK3Q96L96 1907 aa19.85■□□□□ 0.77
SPSB3-202ENST00000563668 IFIT3O14879 490 aaKnown RBP19.84■□□□□ 0.77
SPSB3-202ENST00000563668 TKFCQ3LXA3 575 aa19.84■□□□□ 0.77
SPSB3-202ENST00000563668 GPATCH4Q5T3I0 446 aaKnown RBP19.84■□□□□ 0.77
SPSB3-202ENST00000563668 CLEC4DQ8WXI8 215 aa19.84■□□□□ 0.77
SPSB3-202ENST00000563668 C11orf49Q9H6J7 331 aa19.84■□□□□ 0.77
SPSB3-202ENST00000563668 POTEB2H3BUK9 544 aa19.83■□□□□ 0.77
SPSB3-202ENST00000563668 GJC2Q5T442 439 aaPredicted RBP19.83■□□□□ 0.77
SPSB3-202ENST00000563668 CREB3L3Q68CJ9 461 aa19.83■□□□□ 0.77
SPSB3-202ENST00000563668 RALYLQ86SE5 291 aaKnown RBP19.83■□□□□ 0.77
SPSB3-202ENST00000563668 ADGRF4Q8IZF3 695 aa19.83■□□□□ 0.77
SPSB3-202ENST00000563668 IGDCC4Q8TDY8 1250 aa19.83■□□□□ 0.77
SPSB3-202ENST00000563668 HTATIP2Q9BUP3 242 aa19.83■□□□□ 0.77
SPSB3-202ENST00000563668 CYP39A1Q9NYL5 469 aa19.83■□□□□ 0.77
SPSB3-202ENST00000563668 MCM3APO60318 1980 aa19.82■□□□□ 0.76
SPSB3-202ENST00000563668 MSCO60682 206 aa19.82■□□□□ 0.76
SPSB3-202ENST00000563668 SLC35G1Q2M3R5 365 aa19.82■□□□□ 0.76
SPSB3-202ENST00000563668 NSMFQ6X4W1 530 aa19.82■□□□□ 0.76
SPSB3-202ENST00000563668 ZNF467Q7Z7K2 595 aaPredicted RBP19.82■□□□□ 0.76
SPSB3-202ENST00000563668 CCDC144CPQ8IYA2 1237 aa19.82■□□□□ 0.76
SPSB3-202ENST00000563668 VAT1LQ9HCJ6 419 aa19.82■□□□□ 0.76
SPSB3-202ENST00000563668 SYNGAP1Q96PV0 1343 aa19.82■□□□□ 0.76
SPSB3-202ENST00000563668 ADCY6O43306 1168 aa19.81■□□□□ 0.76
SPSB3-202ENST00000563668 PARP1P09874 1014 aaKnown RBP19.81■□□□□ 0.76
SPSB3-202ENST00000563668 BAATQ14032 418 aaPredicted RBP19.81■□□□□ 0.76
SPSB3-202ENST00000563668 ASPRV1Q53RT3 343 aa19.81■□□□□ 0.76
SPSB3-202ENST00000563668 RASEFQ8IZ41 740 aa19.81■□□□□ 0.76
SPSB3-202ENST00000563668 TNPO1Q92973 898 aaKnown RBP19.81■□□□□ 0.76
SPSB3-202ENST00000563668 TMX3Q96JJ7 454 aa19.81■□□□□ 0.76
SPSB3-202ENST00000563668 KATNBL1Q9H079 304 aa19.81■□□□□ 0.76
SPSB3-202ENST00000563668 JMJD4Q9H9V9 463 aa19.81■□□□□ 0.76
SPSB3-202ENST00000563668 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.81■□□□□ 0.76
SPSB3-202ENST00000563668 MAD2L2Q9UI95 211 aa19.81■□□□□ 0.76
SPSB3-202ENST00000563668 LCTP09848 1927 aa19.81■□□□□ 0.76
SPSB3-202ENST00000563668 IRX5P78411 483 aaPredicted RBP19.81■□□□□ 0.76
SPSB3-202ENST00000563668 CUL4AQ13619 759 aa19.81■□□□□ 0.76
SPSB3-202ENST00000563668 CDC37Q16543 378 aaPredicted RBP19.81■□□□□ 0.76
SPSB3-202ENST00000563668 USH1GQ495M9 461 aa19.81■□□□□ 0.76
SPSB3-202ENST00000563668 ARMCX2Q7L311 632 aa19.81■□□□□ 0.76
SPSB3-202ENST00000563668 MSL3Q8N5Y2 521 aaKnown RBP19.81■□□□□ 0.76
SPSB3-202ENST00000563668 NRBP1Q9UHY1 535 aa19.81■□□□□ 0.76
SPSB3-202ENST00000563668 CNPY2Q9Y2B0 182 aa19.81■□□□□ 0.76
SPSB3-202ENST00000563668 PALM3A6NDB9 673 aaPredicted RBP19.8■□□□□ 0.76
SPSB3-202ENST00000563668 PGK1P00558 417 aa19.8■□□□□ 0.76
SPSB3-202ENST00000563668 MYCNP04198 464 aaPredicted RBP19.8■□□□□ 0.76
SPSB3-202ENST00000563668 ACVR2BQ13705 512 aa19.8■□□□□ 0.76
SPSB3-202ENST00000563668 LRRC26Q2I0M4 334 aa19.8■□□□□ 0.76
SPSB3-202ENST00000563668 TMEM67Q5HYA8 995 aa19.8■□□□□ 0.76
SPSB3-202ENST00000563668 SLC30A10Q6XR72 485 aa19.8■□□□□ 0.76
SPSB3-202ENST00000563668 TBC1D5Q92609 795 aa19.8■□□□□ 0.76
SPSB3-202ENST00000563668 UPF3BQ9BZI7 483 aaKnown RBP19.8■□□□□ 0.76
SPSB3-202ENST00000563668 SENP6Q9GZR1 1112 aaPredicted RBP19.8■□□□□ 0.76
SPSB3-202ENST00000563668 ZHX1Q9UKY1 873 aaPredicted RBP19.8■□□□□ 0.76
SPSB3-202ENST00000563668 RANBP2P49792 3224 aaKnown RBP19.8■□□□□ 0.76
SPSB3-202ENST00000563668 KLRF2D3W0D1 207 aa19.79■□□□□ 0.76
SPSB3-202ENST00000563668 DNM1LO00429 736 aa19.79■□□□□ 0.76
SPSB3-202ENST00000563668 EVI5O60447 810 aa19.79■□□□□ 0.76
SPSB3-202ENST00000563668 PTGS1P23219 599 aa19.79■□□□□ 0.76
SPSB3-202ENST00000563668 TROAPQ12815 778 aa19.79■□□□□ 0.76
SPSB3-202ENST00000563668 WTAPQ15007 396 aa19.79■□□□□ 0.76
SPSB3-202ENST00000563668 LRRC41Q15345 812 aa19.79■□□□□ 0.76
SPSB3-202ENST00000563668 QRICH1Q2TAL8 776 aa19.79■□□□□ 0.76
SPSB3-202ENST00000563668 LY9Q9HBG7 655 aa19.79■□□□□ 0.76
SPSB3-202ENST00000563668 WDR19Q8NEZ3 1342 aa19.78■□□□□ 0.76
SPSB3-202ENST00000563668 PRC1O43663 620 aa19.78■□□□□ 0.76
SPSB3-202ENST00000563668 TMEM63BQ5T3F8 832 aa19.78■□□□□ 0.76
SPSB3-202ENST00000563668 CLEC17AQ6ZS10 378 aa19.78■□□□□ 0.76
SPSB3-202ENST00000563668 MYL10Q9BUA6 226 aa19.78■□□□□ 0.76
SPSB3-202ENST00000563668 LRRC2Q9BYS8 371 aa19.78■□□□□ 0.76
SPSB3-202ENST00000563668 TM6SF1Q9BZW5 370 aa19.78■□□□□ 0.76
SPSB3-202ENST00000563668 ERICH2A1L162 156 aa19.77■□□□□ 0.76
SPSB3-202ENST00000563668 PTPDC1A2A3K4 754 aa19.77■□□□□ 0.76
SPSB3-202ENST00000563668 PPP1R11O60927 126 aaPredicted RBP19.77■□□□□ 0.76
SPSB3-202ENST00000563668 RARBP10826 455 aa19.77■□□□□ 0.76
SPSB3-202ENST00000563668 AKR1A1P14550 325 aa19.77■□□□□ 0.76
SPSB3-202ENST00000563668 CALML3P27482 149 aa19.77■□□□□ 0.76
SPSB3-202ENST00000563668 NUCB2P80303 420 aa19.77■□□□□ 0.76
SPSB3-202ENST00000563668 GRM4Q14833 912 aa19.77■□□□□ 0.76
SPSB3-202ENST00000563668 CCDC144BQ3MJ40 725 aa19.77■□□□□ 0.76
SPSB3-202ENST00000563668 C7orf61Q8IZ16 206 aa19.77■□□□□ 0.76
SPSB3-202ENST00000563668 ARRDC4Q8NCT1 418 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms