RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 ADCYAP1R1P41586 468 aa14.85□□□□□ -0.03
CHRNA3-208ENST00000561128 FXR1P51114 621 aaKnown RBP eCLIP14.85□□□□□ -0.03
CHRNA3-208ENST00000561128 BAATQ14032 418 aaPredicted RBP14.85□□□□□ -0.03
CHRNA3-208ENST00000561128 IQCA1Q86XH1 822 aa14.85□□□□□ -0.03
CHRNA3-208ENST00000561128 MB21D2Q8IYB1 491 aaPredicted RBP14.85□□□□□ -0.03
CHRNA3-208ENST00000561128 RUFY2Q8WXA3 655 aa14.85□□□□□ -0.03
CHRNA3-208ENST00000561128 KRT23Q9C075 422 aa14.85□□□□□ -0.03
CHRNA3-208ENST00000561128 KAT14Q9H8E8 782 aa14.85□□□□□ -0.03
CHRNA3-208ENST00000561128 NRBP1Q9UHY1 535 aa14.85□□□□□ -0.03
CHRNA3-208ENST00000561128 U3KPZ7 1027 aaPredicted RBP14.85□□□□□ -0.03
CHRNA3-208ENST00000561128 AKR1A1P14550 325 aa14.84□□□□□ -0.03
CHRNA3-208ENST00000561128 RTP1P59025 263 aa14.84□□□□□ -0.03
CHRNA3-208ENST00000561128 ACVR2BQ13705 512 aa14.84□□□□□ -0.03
CHRNA3-208ENST00000561128 CDC37Q16543 378 aaPredicted RBP14.84□□□□□ -0.03
CHRNA3-208ENST00000561128 TKFCQ3LXA3 575 aa14.84□□□□□ -0.03
CHRNA3-208ENST00000561128 CCDC144BQ3MJ40 725 aa14.84□□□□□ -0.03
CHRNA3-208ENST00000561128 USH1GQ495M9 461 aa14.84□□□□□ -0.03
CHRNA3-208ENST00000561128 BMP2KLQ5H9B9 411 aa14.84□□□□□ -0.03
CHRNA3-208ENST00000561128 FBXO16Q8IX29 292 aaPredicted RBP14.84□□□□□ -0.03
CHRNA3-208ENST00000561128 ADGRF4Q8IZF3 695 aa14.84□□□□□ -0.03
CHRNA3-208ENST00000561128 TBC1D5Q92609 795 aa14.84□□□□□ -0.03
CHRNA3-208ENST00000561128 UBAC1Q9BSL1 405 aa14.84□□□□□ -0.03
CHRNA3-208ENST00000561128 CNNM2Q9H8M5 875 aa14.84□□□□□ -0.03
CHRNA3-208ENST00000561128 PDGFCQ9NRA1 345 aa14.84□□□□□ -0.03
CHRNA3-208ENST00000561128 CNPY2Q9Y2B0 182 aa14.84□□□□□ -0.03
CHRNA3-208ENST00000561128 NR2E3Q9Y5X4 410 aa14.84□□□□□ -0.03
CHRNA3-208ENST00000561128 OPLAHO14841 1288 aa14.83□□□□□ -0.04
CHRNA3-208ENST00000561128 RARBP10826 455 aa14.83□□□□□ -0.04
CHRNA3-208ENST00000561128 MAGEA10P43363 369 aaPredicted RBP14.83□□□□□ -0.04
CHRNA3-208ENST00000561128 SNX17Q15036 470 aa14.83□□□□□ -0.04
CHRNA3-208ENST00000561128 TRIM60Q495X7 471 aa14.83□□□□□ -0.04
CHRNA3-208ENST00000561128 CCSAPQ6IQ19 270 aaPredicted RBP14.83□□□□□ -0.04
CHRNA3-208ENST00000561128 EEPD1Q7L9B9 569 aa14.83□□□□□ -0.04
CHRNA3-208ENST00000561128 MSL3Q8N5Y2 521 aaKnown RBP14.83□□□□□ -0.04
CHRNA3-208ENST00000561128 GDF15Q99988 308 aa14.83□□□□□ -0.04
CHRNA3-208ENST00000561128 JMJD4Q9H9V9 463 aa14.83□□□□□ -0.04
CHRNA3-208ENST00000561128 COL20A1Q9P218 1284 aa14.83□□□□□ -0.04
CHRNA3-208ENST00000561128 MAD2L2Q9UI95 211 aa14.83□□□□□ -0.04
CHRNA3-208ENST00000561128 PHF24Q9UPV7 400 aa14.83□□□□□ -0.04
CHRNA3-208ENST00000561128 WDR19Q8NEZ3 1342 aa14.83□□□□□ -0.04
CHRNA3-208ENST00000561128 TRIOBPQ9H2D6 2365 aa14.82□□□□□ -0.04
CHRNA3-208ENST00000561128 A0A1W2PQ45 241 aaPredicted RBP14.82□□□□□ -0.04
CHRNA3-208ENST00000561128 A0A1W2PQY0 241 aa14.82□□□□□ -0.04
CHRNA3-208ENST00000561128 KBTBD13C9JR72 458 aa14.82□□□□□ -0.04
CHRNA3-208ENST00000561128 SOX1O00570 391 aaPredicted RBP14.82□□□□□ -0.04
CHRNA3-208ENST00000561128 SLC27A2O14975 620 aa14.82□□□□□ -0.04
CHRNA3-208ENST00000561128 ALDH5A1P51649 535 aaPredicted RBP14.82□□□□□ -0.04
CHRNA3-208ENST00000561128 QRICH1Q2TAL8 776 aa14.82□□□□□ -0.04
CHRNA3-208ENST00000561128 ASPRV1Q53RT3 343 aa14.82□□□□□ -0.04
CHRNA3-208ENST00000561128 GPATCH4Q5T3I0 446 aaKnown RBP14.82□□□□□ -0.04
CHRNA3-208ENST00000561128 IFIT1BQ5T764 474 aaKnown RBP14.82□□□□□ -0.04
CHRNA3-208ENST00000561128 SLC39A5Q6ZMH5 540 aa14.82□□□□□ -0.04
CHRNA3-208ENST00000561128 SH3RF1Q7Z6J0 888 aa14.82□□□□□ -0.04
CHRNA3-208ENST00000561128 KLHDC9Q8NEP7 349 aa14.82□□□□□ -0.04
CHRNA3-208ENST00000561128 MYL10Q9BUA6 226 aa14.82□□□□□ -0.04
CHRNA3-208ENST00000561128 MYH6P13533 1939 aa14.82□□□□□ -0.04
CHRNA3-208ENST00000561128 PTPDC1A2A3K4 754 aa14.81□□□□□ -0.04
CHRNA3-208ENST00000561128 CYTH3O43739 400 aa14.81□□□□□ -0.04
CHRNA3-208ENST00000561128 CALML3P27482 149 aa14.81□□□□□ -0.04
CHRNA3-208ENST00000561128 RPS6P62753 249 aaKnown RBP14.81□□□□□ -0.04
CHRNA3-208ENST00000561128 BEX3Q00994 111 aa14.81□□□□□ -0.04
CHRNA3-208ENST00000561128 TAPT1Q6NXT6 567 aa14.81□□□□□ -0.04
CHRNA3-208ENST00000561128 ARRDC4Q8NCT1 418 aa14.81□□□□□ -0.04
CHRNA3-208ENST00000561128 MORC4Q8TE76 937 aa14.81□□□□□ -0.04
CHRNA3-208ENST00000561128 UPF3AQ9H1J1 476 aaKnown RBP14.81□□□□□ -0.04
CHRNA3-208ENST00000561128 FAM184BQ9ULE4 1060 aa14.81□□□□□ -0.04
CHRNA3-208ENST00000561128 ATP11BQ9Y2G3 1177 aa14.81□□□□□ -0.04
CHRNA3-208ENST00000561128 RANBP2P49792 3224 aaKnown RBP14.8□□□□□ -0.04
CHRNA3-208ENST00000561128 PALM3A6NDB9 673 aaPredicted RBP14.8□□□□□ -0.04
CHRNA3-208ENST00000561128 RBAK-RBAKDNI3L0D1 243 aa14.8□□□□□ -0.04
CHRNA3-208ENST00000561128 IFIT3O14879 490 aaKnown RBP14.8□□□□□ -0.04
CHRNA3-208ENST00000561128 PARP1P09874 1014 aaKnown RBP14.8□□□□□ -0.04
CHRNA3-208ENST00000561128 SMPD1P17405 629 aa14.8□□□□□ -0.04
CHRNA3-208ENST00000561128 ITGB8P26012 769 aa14.8□□□□□ -0.04
CHRNA3-208ENST00000561128 MDM2Q00987 491 aaPredicted RBP14.8□□□□□ -0.04
CHRNA3-208ENST00000561128 GRM4Q14833 912 aa14.8□□□□□ -0.04
CHRNA3-208ENST00000561128 NECTIN1Q15223 517 aa14.8□□□□□ -0.04
CHRNA3-208ENST00000561128 CREB3L3Q68CJ9 461 aa14.8□□□□□ -0.04
CHRNA3-208ENST00000561128 RAB11FIP4Q86YS3 637 aa14.8□□□□□ -0.04
CHRNA3-208ENST00000561128 IGDCC4Q8TDY8 1250 aa14.8□□□□□ -0.04
CHRNA3-208ENST00000561128 MTMR8Q96EF0 704 aa14.8□□□□□ -0.04
CHRNA3-208ENST00000561128 ABHD16BQ9H3Z7 469 aa14.8□□□□□ -0.04
CHRNA3-208ENST00000561128 LY9Q9HBG7 655 aa14.8□□□□□ -0.04
CHRNA3-208ENST00000561128 VAT1LQ9HCJ6 419 aa14.8□□□□□ -0.04
CHRNA3-208ENST00000561128 ANO2Q9NQ90 1003 aa14.8□□□□□ -0.04
CHRNA3-208ENST00000561128 PDLIM7Q9NR12 457 aa14.8□□□□□ -0.04
CHRNA3-208ENST00000561128 GNEQ9Y223 722 aaKnown RBP14.8□□□□□ -0.04
CHRNA3-208ENST00000561128 DUSP11O75319 330 aaKnown RBP14.79□□□□□ -0.04
CHRNA3-208ENST00000561128 NT5C2P49902 561 aa14.79□□□□□ -0.04
CHRNA3-208ENST00000561128 ACLYP53396 1101 aa14.79□□□□□ -0.04
CHRNA3-208ENST00000561128 TROAPQ12815 778 aa14.79□□□□□ -0.04
CHRNA3-208ENST00000561128 KCNA10Q16322 511 aa14.79□□□□□ -0.04
CHRNA3-208ENST00000561128 CCDC178Q5BJE1 867 aa14.79□□□□□ -0.04
CHRNA3-208ENST00000561128 TMEM67Q5HYA8 995 aa14.79□□□□□ -0.04
CHRNA3-208ENST00000561128 DNAH12Q6ZR08 3092 aa14.79□□□□□ -0.04
CHRNA3-208ENST00000561128 RALYLQ86SE5 291 aaKnown RBP14.79□□□□□ -0.04
CHRNA3-208ENST00000561128 NCOA7Q8NI08 942 aa14.79□□□□□ -0.04
CHRNA3-208ENST00000561128 LRRC2Q9BYS8 371 aa14.79□□□□□ -0.04
CHRNA3-208ENST00000561128 TRIM43BA6NCK2 446 aa14.78□□□□□ -0.04
CHRNA3-208ENST00000561128 KLRF2D3W0D1 207 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms