RNA–Protein interactions for RNA: YPL116W

HOS3, Transcript of Trichostatin A-insensitive homodimeric histone deacetylase (HDAC), yeast

Gene HOS3, Length 2,094 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HOS3	YPL116W	YHL041W	P38730	149 aa		4.04	□□□□□ -1.76
HOS3	YPL116W	RPN3	P40016	523 aa	Known RBP	4.04	□□□□□ -1.76
HOS3	YPL116W	RGI1	P40043	161 aa	Predicted RBP	4.04	□□□□□ -1.76
HOS3	YPL116W	INP51	P40559	946 aa	Known RBP	4.04	□□□□□ -1.76
HOS3	YPL116W	LCB2	P40970	561 aa		4.04	□□□□□ -1.76
HOS3	YPL116W	YFR018C	P43599	363 aa		4.04	□□□□□ -1.76
HOS3	YPL116W	PMT3	P47190	753 aa		4.04	□□□□□ -1.76
HOS3	YPL116W	LSC2	P53312	427 aa		4.04	□□□□□ -1.76
HOS3	YPL116W	COS6	P53344	381 aa		4.04	□□□□□ -1.76
HOS3	YPL116W	CAF40	P53829	373 aa		4.04	□□□□□ -1.76
HOS3	YPL116W	YNL181W	P53878	407 aa		4.04	□□□□□ -1.76
HOS3	YPL116W	EOS1	P53938	366 aa		4.04	□□□□□ -1.76
HOS3	YPL116W	YMR265C	Q03508	461 aa	Known RBP	4.04	□□□□□ -1.76
HOS3	YPL116W	HED1	Q03937	162 aa		4.04	□□□□□ -1.76
HOS3	YPL116W	SEG1	Q04279	960 aa		4.04	□□□□□ -1.76
HOS3	YPL116W	BUD22	Q04347	519 aa	Known RBP	4.04	□□□□□ -1.76
HOS3	YPL116W	YMR027W	Q04371	470 aa		4.04	□□□□□ -1.76
HOS3	YPL116W	UTP21	Q06078	939 aa	Predicted RBP	4.04	□□□□□ -1.76
HOS3	YPL116W	HDA3	Q06623	655 aa		4.04	□□□□□ -1.76
HOS3	YPL116W	CDA2	Q06703	312 aa		4.04	□□□□□ -1.76
HOS3	YPL116W	RAX1	Q08760	435 aa		4.04	□□□□□ -1.76
HOS3	YPL116W	SRO7	Q12038	1033 aa		4.04	□□□□□ -1.76
HOS3	YPL116W	MLH3	Q12083	715 aa		4.04	□□□□□ -1.76
HOS3	YPL116W	RPP2A	P05319	106 aa	Known RBP	4.03	□□□□□ -1.76
HOS3	YPL116W	RPL6B	P05739	176 aa	Known RBP	4.03	□□□□□ -1.76
HOS3	YPL116W	NFT1	P0CE68	1218 aa		4.03	□□□□□ -1.76
HOS3	YPL116W	RPL35A	P0CX84	120 aa	Known RBP	4.03	□□□□□ -1.76
HOS3	YPL116W	RPL35B	P0CX85	120 aa	Known RBP	4.03	□□□□□ -1.76
HOS3	YPL116W	SAM1	P10659	382 aa	Known RBP	4.03	□□□□□ -1.76
HOS3	YPL116W	SNA3	P14359	133 aa		4.03	□□□□□ -1.76
HOS3	YPL116W	IFM1	P25038	676 aa		4.03	□□□□□ -1.76
HOS3	YPL116W	GEX1	P25596	615 aa		4.03	□□□□□ -1.76
HOS3	YPL116W	CAM1	P29547	415 aa	Known RBP	4.03	□□□□□ -1.76
HOS3	YPL116W	PYC2	P32327	1180 aa	Known RBP	4.03	□□□□□ -1.76
HOS3	YPL116W	ATP11	P32453	318 aa		4.03	□□□□□ -1.76
HOS3	YPL116W	NIC96	P34077	839 aa		4.03	□□□□□ -1.76
HOS3	YPL116W	PPS1	P38148	807 aa		4.03	□□□□□ -1.76
HOS3	YPL116W	UBX7	P38349	436 aa		4.03	□□□□□ -1.76
HOS3	YPL116W	PTC7	P38797	343 aa		4.03	□□□□□ -1.76
HOS3	YPL116W	NVJ1	P38881	321 aa		4.03	□□□□□ -1.76
HOS3	YPL116W	ACO2	P39533	789 aa		4.03	□□□□□ -1.76
HOS3	YPL116W	LTP1	P40347	161 aa		4.03	□□□□□ -1.76
HOS3	YPL116W	ATF1	P40353	525 aa		4.03	□□□□□ -1.76
HOS3	YPL116W	YIL089W	P40500	205 aa		4.03	□□□□□ -1.76
HOS3	YPL116W	FET4	P40988	552 aa		4.03	□□□□□ -1.76
HOS3	YPL116W	FMP32	P43557	207 aa		4.03	□□□□□ -1.76
HOS3	YPL116W	FMP33	P46998	180 aa		4.03	□□□□□ -1.76
HOS3	YPL116W	RPC17	P47076	161 aa		4.03	□□□□□ -1.76
HOS3	YPL116W	NPY1	P53164	384 aa		4.03	□□□□□ -1.76
HOS3	YPL116W	YGL036W	P53185	909 aa	Predicted RBP	4.03	□□□□□ -1.76
HOS3	YPL116W	IMP4	P53941	290 aa	Known RBP	4.03	□□□□□ -1.76
HOS3	YPL116W	RPL6A	Q02326	176 aa	Known RBP	4.03	□□□□□ -1.76
HOS3	YPL116W	SLD5	Q03406	294 aa		4.03	□□□□□ -1.76
HOS3	YPL116W	TFC6	Q06339	672 aa		4.03	□□□□□ -1.76
HOS3	YPL116W	RFU1	Q08003	200 aa		4.03	□□□□□ -1.76
HOS3	YPL116W	GSH2	Q08220	491 aa		4.03	□□□□□ -1.76
HOS3	YPL116W	HRK1	Q08732	759 aa	Known RBP	4.03	□□□□□ -1.76
HOS3	YPL116W	UAF30	Q08747	228 aa		4.03	□□□□□ -1.76
HOS3	YPL116W	FYV7	Q12247	151 aa		4.03	□□□□□ -1.76
HOS3	YPL116W	PGA3	Q12746	312 aa	Known RBP	4.03	□□□□□ -1.76
HOS3	YPL116W	ISN1	Q99312	450 aa		4.03	□□□□□ -1.76
HOS3	YPL116W	Q0144	Q9ZZW2	109 aa		4.03	□□□□□ -1.76
HOS3	YPL116W	GDB1	Q06625	1536 aa		4.03	□□□□□ -1.76
HOS3	YPL116W	POM152	P39685	1337 aa		4.03	□□□□□ -1.76
HOS3	YPL116W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.02	□□□□□ -1.77	not detected
HOS3	YPL116W	ERR1	P0CX10	437 aa		4.02	□□□□□ -1.77
HOS3	YPL116W	ERR2	P0CX11	437 aa		4.02	□□□□□ -1.77
HOS3	YPL116W	PYC1	P11154	1178 aa	Known RBP	4.02	□□□□□ -1.77
HOS3	YPL116W	GAL3	P13045	520 aa		4.02	□□□□□ -1.77
HOS3	YPL116W	RNR3	P21672	869 aa	Known RBP	4.02	□□□□□ -1.77
HOS3	YPL116W	URA7	P28274	579 aa	Known RBP	4.02	□□□□□ -1.77
HOS3	YPL116W	GPI10	P30777	616 aa		4.02	□□□□□ -1.77
HOS3	YPL116W	SFP1	P32432	683 aa		4.02	□□□□□ -1.77
HOS3	YPL116W	PHA2	P32452	334 aa		4.02	□□□□□ -1.77
HOS3	YPL116W	MSS1	P32559	526 aa	Predicted RBP	4.02	□□□□□ -1.77
HOS3	YPL116W	FRD1	P32614	470 aa	Known RBP	4.02	□□□□□ -1.77
HOS3	YPL116W	SRP102	P36057	244 aa	Predicted RBP	4.02	□□□□□ -1.77
HOS3	YPL116W	ECM2	P38241	364 aa	Known RBP	4.02	□□□□□ -1.77
HOS3	YPL116W	MSC7	P38694	644 aa		4.02	□□□□□ -1.77
HOS3	YPL116W	YHR112C	P38716	378 aa		4.02	□□□□□ -1.77
HOS3	YPL116W	VMA7	P39111	118 aa		4.02	□□□□□ -1.77
HOS3	YPL116W	GPP2	P40106	250 aa	Known RBP	4.02	□□□□□ -1.77
HOS3	YPL116W	GTT1	P40582	234 aa		4.02	□□□□□ -1.77
HOS3	YPL116W	HXT8	P40886	569 aa		4.02	□□□□□ -1.77
HOS3	YPL116W	FET5	P43561	622 aa		4.02	□□□□□ -1.77
HOS3	YPL116W	RPE1	P46969	238 aa		4.02	□□□□□ -1.77
HOS3	YPL116W	PTK2	P47116	818 aa	Known RBP	4.02	□□□□□ -1.77
HOS3	YPL116W	HLJ1	P48353	224 aa		4.02	□□□□□ -1.77
HOS3	YPL116W	PAC10	P48363	199 aa		4.02	□□□□□ -1.77
HOS3	YPL116W	GPG1	P53130	126 aa		4.02	□□□□□ -1.77
HOS3	YPL116W	SLI1	P53304	468 aa		4.02	□□□□□ -1.77
HOS3	YPL116W	ARL3	Q02804	198 aa		4.02	□□□□□ -1.77
HOS3	YPL116W	ATP25	Q03153	612 aa		4.02	□□□□□ -1.77
HOS3	YPL116W	YMR155W	Q03795	547 aa		4.02	□□□□□ -1.77
HOS3	YPL116W	PAL1	Q05518	499 aa	Known RBP	4.02	□□□□□ -1.77
HOS3	YPL116W	PNP1	Q05788	311 aa		4.02	□□□□□ -1.77
HOS3	YPL116W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	4.02	□□□□□ -1.77	not detected
HOS3	YPL116W	ENV9	Q08651	330 aa		4.02	□□□□□ -1.77
HOS3	YPL116W	GET4	Q12125	312 aa		4.02	□□□□□ -1.77
HOS3	YPL116W	DGK1	Q12382	290 aa		4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 30.7 ms