RNA–Protein interactions for RNA: YOR227W

HER1, Transcript of Protein of unknown function, yeastyeast

Gene HER1, Length 3,741 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HER1YOR227W YGL138CP53122 345 aa1.97□□□□□ -2.09
HER1YOR227W LSC2P53312 427 aa1.97□□□□□ -2.09
HER1YOR227W YNL143CP53908 130 aa1.97□□□□□ -2.09
HER1YOR227W RPS15Q01855 142 aaKnown RBP1.97□□□□□ -2.09
HER1YOR227W SNZ1Q03148 297 aa1.97□□□□□ -2.09
HER1YOR227W MUS81Q04149 632 aaPredicted RBP1.97□□□□□ -2.09
HER1YOR227W GIS4Q04233 774 aa1.97□□□□□ -2.09
HER1YOR227W SMA2Q04658 369 aa1.97□□□□□ -2.09
HER1YOR227W GEP3Q08622 556 aa1.97□□□□□ -2.09
HER1YOR227W CLP1Q08685 445 aaPredicted RBP1.97□□□□□ -2.09
HER1YOR227W YJR112W-AQ3E743 109 aa1.97□□□□□ -2.09
HER1YOR227W CAR2P07991 424 aaKnown RBP1.97□□□□□ -2.09
HER1YOR227W TUP1P16649 713 aa1.97□□□□□ -2.09
HER1YOR227W RPC82P32349 654 aa1.97□□□□□ -2.09
HER1YOR227W MRE11P32829 692 aa1.97□□□□□ -2.09
HER1YOR227W LOT5P34234 306 aa1.97□□□□□ -2.09
HER1YOR227W TDP1P38319 544 aa1.97□□□□□ -2.09
HER1YOR227W YHR033WP38690 423 aa1.97□□□□□ -2.09
HER1YOR227W VPS45P38932 577 aa1.97□□□□□ -2.09
HER1YOR227W GET2P40056 285 aa1.97□□□□□ -2.09
HER1YOR227W IAH1P41734 238 aa1.97□□□□□ -2.09
HER1YOR227W ALK1P43633 760 aaKnown RBP1.97□□□□□ -2.09
HER1YOR227W SSY5P47002 699 aa1.97□□□□□ -2.09
HER1YOR227W RAI1P53063 387 aaKnown RBP1.97□□□□□ -2.09
HER1YOR227W RHO5P53879 331 aaKnown RBP1.97□□□□□ -2.09
HER1YOR227W GSH2Q08220 491 aa1.97□□□□□ -2.09
HER1YOR227W PUS7Q08647 676 aaKnown RBP1.97□□□□□ -2.09
HER1YOR227W ULA1Q12059 462 aa1.97□□□□□ -2.09
HER1YOR227W NDJ1Q12366 352 aa1.97□□□□□ -2.09
HER1YOR227W RRD2Q12461 358 aa1.97□□□□□ -2.09
HER1YOR227W YLR302CO13544 120 aa1.97□□□□□ -2.09
HER1YOR227W TPK2P06245 380 aa1.97□□□□□ -2.09
HER1YOR227W DFR1P07807 211 aaKnown RBP RIP-Chip data1.97□□□□□ -2.09not detected
HER1YOR227W EST1P17214 699 aaPredicted RBP1.97□□□□□ -2.09
HER1YOR227W PHO84P25297 587 aaKnown RBP1.97□□□□□ -2.09
HER1YOR227W LTV1P34078 463 aa1.97□□□□□ -2.09
HER1YOR227W SEF1P34228 1148 aa1.97□□□□□ -2.09
HER1YOR227W YUH1P35127 236 aa1.97□□□□□ -2.09
HER1YOR227W LRG1P35688 1017 aa1.97□□□□□ -2.09
HER1YOR227W TPO5P36029 618 aa1.97□□□□□ -2.09
HER1YOR227W YHR054CP38780 354 aa1.97□□□□□ -2.09
HER1YOR227W PFA3P42836 336 aa1.97□□□□□ -2.09
HER1YOR227W BPL1P48445 690 aaPredicted RBP1.97□□□□□ -2.09
HER1YOR227W LYS5P50113 272 aa1.97□□□□□ -2.09
HER1YOR227W IMO32P53219 342 aa1.97□□□□□ -2.09
HER1YOR227W TIM21P53220 239 aa1.97□□□□□ -2.09
HER1YOR227W YSH1Q06224 779 aaPredicted RBP1.97□□□□□ -2.09
HER1YOR227W LUC7Q07508 261 aaPredicted RBP1.97□□□□□ -2.09
HER1YOR227W RUD3Q12234 484 aaKnown RBP1.97□□□□□ -2.09
HER1YOR227W HRP1Q99383 534 aaKnown RBP1.97□□□□□ -2.09
HER1YOR227W ATP2P00830 511 aaKnown RBP1.96□□□□□ -2.09
HER1YOR227W HMX1P32339 317 aa1.96□□□□□ -2.09
HER1YOR227W RFT1P38206 574 aaPredicted RBP1.96□□□□□ -2.09
HER1YOR227W OSH7P38755 437 aa1.96□□□□□ -2.09
HER1YOR227W LIN1P38852 340 aaPredicted RBP1.96□□□□□ -2.09
HER1YOR227W SMC2P38989 1170 aaKnown RBP1.96□□□□□ -2.09
HER1YOR227W SSU1P41930 458 aa1.96□□□□□ -2.09
HER1YOR227W SWP82P43554 623 aa1.96□□□□□ -2.09
HER1YOR227W EPL1P43572 832 aa1.96□□□□□ -2.09
HER1YOR227W ASE1P50275 885 aa1.96□□□□□ -2.09
HER1YOR227W VID30P53076 958 aa1.96□□□□□ -2.09
HER1YOR227W CUE3P53137 624 aaKnown RBP1.96□□□□□ -2.09
HER1YOR227W INA17Q02888 182 aa1.96□□□□□ -2.09
HER1YOR227W MSC2Q03455 724 aa1.96□□□□□ -2.09
HER1YOR227W ATG38Q05789 226 aaKnown RBP1.96□□□□□ -2.09
HER1YOR227W RIM20Q12033 661 aa1.96□□□□□ -2.09
HER1YOR227W YPL150WQ12152 901 aa1.96□□□□□ -2.09
HER1YOR227W Q0010Q9ZZX9 128 aa1.96□□□□□ -2.09
HER1YOR227W PET122P10355 254 aa1.96□□□□□ -2.1
HER1YOR227W PYC1P11154 1178 aaKnown RBP1.96□□□□□ -2.1
HER1YOR227W UNG1P12887 359 aa1.96□□□□□ -2.1
HER1YOR227W CLB3P24870 427 aa1.96□□□□□ -2.1
HER1YOR227W PEP3P27801 918 aa1.96□□□□□ -2.1
HER1YOR227W IDH2P28241 369 aaKnown RBP1.96□□□□□ -2.1
HER1YOR227W ACP1P32463 125 aa1.96□□□□□ -2.1
HER1YOR227W NNK1P36003 928 aa1.96□□□□□ -2.1
HER1YOR227W MCR1P36060 302 aaKnown RBP1.96□□□□□ -2.1
HER1YOR227W APN2P38207 520 aa1.96□□□□□ -2.1
HER1YOR227W YMR147WP40218 223 aaKnown RBP1.96□□□□□ -2.1
HER1YOR227W SEC24P40482 926 aaKnown RBP1.96□□□□□ -2.1
HER1YOR227W YIL108WP40483 696 aaKnown RBP1.96□□□□□ -2.1
HER1YOR227W CTK2P46962 323 aa1.96□□□□□ -2.1
HER1YOR227W TOM22P49334 152 aa1.96□□□□□ -2.1
HER1YOR227W YGR111WP53265 400 aa1.96□□□□□ -2.1
HER1YOR227W DOT1Q04089 582 aaKnown RBP1.96□□□□□ -2.1
HER1YOR227W ATG29Q12092 213 aa1.96□□□□□ -2.1
HER1YOR227W CTF3Q12748 733 aa1.96□□□□□ -2.1
HER1YOR227W PNO1Q99216 274 aaKnown RBP1.96□□□□□ -2.1
HER1YOR227W ARD1P07347 238 aaPredicted RBP1.96□□□□□ -2.1
HER1YOR227W POX1P13711 748 aa1.96□□□□□ -2.1
HER1YOR227W RFA1P22336 621 aaKnown RBP1.96□□□□□ -2.1
HER1YOR227W KRE6P32486 720 aa1.96□□□□□ -2.1
HER1YOR227W DOA4P32571 926 aa1.96□□□□□ -2.1
HER1YOR227W MSN4P33749 630 aa1.96□□□□□ -2.1
HER1YOR227W CAB3P36076 571 aa1.96□□□□□ -2.1
HER1YOR227W SAP190P36123 1033 aa1.96□□□□□ -2.1
HER1YOR227W MAL33P38157 468 aa1.96□□□□□ -2.1
HER1YOR227W PHO88P38264 188 aaPredicted RBP1.96□□□□□ -2.1
HER1YOR227W MSS4P38994 779 aa1.96□□□□□ -2.1
HER1YOR227W VFA1P40080 203 aa1.96□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms